RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 NISCHQ9Y2I1 1504 aa30.06■■■□□ 2.4
PPP3CA-202ENST00000394853 DCAF8L2P0C7V8 631 aa26.39■■□□□ 1.81
PPP3CA-202ENST00000394853 CCDC180Q9P1Z9 1646 aa25.68■■□□□ 1.7
PPP3CA-202ENST00000394853 SHROOM4Q9ULL8 1493 aa25.53■■□□□ 1.68
PPP3CA-202ENST00000394853 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
PPP3CA-202ENST00000394853 ABCC9O60706 1549 aa25.01■■□□□ 1.59
PPP3CA-202ENST00000394853 SUPT5HO00267 1087 aaKnown RBP24.79■■□□□ 1.56
PPP3CA-202ENST00000394853 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
PPP3CA-202ENST00000394853 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
PPP3CA-202ENST00000394853 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
PPP3CA-202ENST00000394853 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
PPP3CA-202ENST00000394853 NACADO15069 1562 aa23.96■■□□□ 1.43
PPP3CA-202ENST00000394853 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
PPP3CA-202ENST00000394853 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
PPP3CA-202ENST00000394853 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
PPP3CA-202ENST00000394853 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
PPP3CA-202ENST00000394853 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.34
PPP3CA-202ENST00000394853 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
PPP3CA-202ENST00000394853 WIZO95785 1651 aa23.22■■□□□ 1.31
PPP3CA-202ENST00000394853 BAZ1AQ9NRL2 1556 aaPredicted RBP23.13■■□□□ 1.29
PPP3CA-202ENST00000394853 BICRAQ9NZM4 1560 aa23.07■■□□□ 1.28
PPP3CA-202ENST00000394853 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
PPP3CA-202ENST00000394853 LOC105371045A0A1W2PR82 267 aa23.07■■□□□ 1.28
PPP3CA-202ENST00000394853 SMARCA4P51532 1647 aa22.99■■□□□ 1.27
PPP3CA-202ENST00000394853 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
PPP3CA-202ENST00000394853 EHMT2Q96KQ7 1210 aa22.91■■□□□ 1.26
PPP3CA-202ENST00000394853 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
PPP3CA-202ENST00000394853 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
PPP3CA-202ENST00000394853 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
PPP3CA-202ENST00000394853 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
PPP3CA-202ENST00000394853 ABCC8Q09428 1581 aa22.57■■□□□ 1.2
PPP3CA-202ENST00000394853 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
PPP3CA-202ENST00000394853 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
PPP3CA-202ENST00000394853 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
PPP3CA-202ENST00000394853 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
PPP3CA-202ENST00000394853 SOGA1O94964 1423 aa22.27■■□□□ 1.16
PPP3CA-202ENST00000394853 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
PPP3CA-202ENST00000394853 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
PPP3CA-202ENST00000394853 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
PPP3CA-202ENST00000394853 DNAJC5BQ9UF47 199 aa22.19■■□□□ 1.14
PPP3CA-202ENST00000394853 RUSC2Q8N2Y8 1516 aa22.19■■□□□ 1.14
PPP3CA-202ENST00000394853 PPARGC1BQ86YN6 1023 aaKnown RBP22.18■■□□□ 1.14
PPP3CA-202ENST00000394853 CSRNP3Q8WYN3 585 aa22.13■■□□□ 1.13
PPP3CA-202ENST00000394853 UBTFP17480 764 aaKnown RBP22.11■■□□□ 1.13
PPP3CA-202ENST00000394853 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
PPP3CA-202ENST00000394853 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
PPP3CA-202ENST00000394853 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
PPP3CA-202ENST00000394853 PELP1Q8IZL8 1130 aaKnown RBP22.06■■□□□ 1.12
PPP3CA-202ENST00000394853 SLC24A1O60721 1099 aa22.05■■□□□ 1.12
PPP3CA-202ENST00000394853 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
PPP3CA-202ENST00000394853 TTBK1Q5TCY1 1321 aaPredicted RBP21.99■■□□□ 1.11
PPP3CA-202ENST00000394853 MYT1Q01538 1121 aa21.94■■□□□ 1.1
PPP3CA-202ENST00000394853 HRCP23327 699 aa21.93■■□□□ 1.1
PPP3CA-202ENST00000394853 EEA1Q15075 1411 aa21.92■■□□□ 1.1
PPP3CA-202ENST00000394853 CFTRP13569 1480 aa21.89■■□□□ 1.1
PPP3CA-202ENST00000394853 CEP162Q5TB80 1403 aa21.87■■□□□ 1.09
PPP3CA-202ENST00000394853 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
PPP3CA-202ENST00000394853 TNIKQ9UKE5 1360 aa21.83■■□□□ 1.08
PPP3CA-202ENST00000394853 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
PPP3CA-202ENST00000394853 GOLGA3Q08378 1498 aa21.81■■□□□ 1.08
PPP3CA-202ENST00000394853 FBLN2P98095 1184 aa21.8■■□□□ 1.08
PPP3CA-202ENST00000394853 CUX1P39880 1505 aa21.8■■□□□ 1.08
PPP3CA-202ENST00000394853 ERCC6Q03468 1493 aa21.75■■□□□ 1.07
PPP3CA-202ENST00000394853 ATP1B4Q9UN42 357 aaPredicted RBP21.75■■□□□ 1.07
PPP3CA-202ENST00000394853 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
PPP3CA-202ENST00000394853 RAPGEF2Q9Y4G8 1499 aa21.73■■□□□ 1.07
PPP3CA-202ENST00000394853 NESP48681 1621 aa21.7■■□□□ 1.06
PPP3CA-202ENST00000394853 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
PPP3CA-202ENST00000394853 APLP2Q06481 763 aa21.66■■□□□ 1.06
PPP3CA-202ENST00000394853 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
PPP3CA-202ENST00000394853 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
PPP3CA-202ENST00000394853 KIF27Q86VH2 1401 aa21.61■■□□□ 1.05
PPP3CA-202ENST00000394853 CLIP1P30622 1438 aa21.61■■□□□ 1.05
PPP3CA-202ENST00000394853 KIF21BO75037 1637 aa21.6■■□□□ 1.05
PPP3CA-202ENST00000394853 CUX2O14529 1486 aa21.57■■□□□ 1.04
PPP3CA-202ENST00000394853 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
PPP3CA-202ENST00000394853 PRKCSHP14314 528 aaPredicted RBP21.51■■□□□ 1.03
PPP3CA-202ENST00000394853 PRDM2Q13029 1718 aa21.51■■□□□ 1.03
PPP3CA-202ENST00000394853 PRXQ9BXM0 1461 aa21.49■■□□□ 1.03
PPP3CA-202ENST00000394853 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
PPP3CA-202ENST00000394853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
PPP3CA-202ENST00000394853 IGF1RP08069 1367 aa21.44■■□□□ 1.02
PPP3CA-202ENST00000394853 P3H3Q8IVL6 736 aa21.4■■□□□ 1.02
PPP3CA-202ENST00000394853 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
PPP3CA-202ENST00000394853 CARMIL1Q5VZK9 1371 aa21.37■■□□□ 1.01
PPP3CA-202ENST00000394853 VPS8Q8N3P4 1428 aa21.37■■□□□ 1.01
PPP3CA-202ENST00000394853 CHMP7Q8WUX9 453 aaPredicted RBP21.37■■□□□ 1.01
PPP3CA-202ENST00000394853 ERICH3Q5RHP9 1530 aa21.36■■□□□ 1.01
PPP3CA-202ENST00000394853 HNRNPUL2Q1KMD3 747 aaKnown RBP21.36■■□□□ 1.01
PPP3CA-202ENST00000394853 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
PPP3CA-202ENST00000394853 POLA1P09884 1462 aaPredicted RBP21.35■■□□□ 1.01
PPP3CA-202ENST00000394853 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1
PPP3CA-202ENST00000394853 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1
PPP3CA-202ENST00000394853 CCER1Q8TC90 406 aaPredicted RBP21.32■■□□□ 1
PPP3CA-202ENST00000394853 URB2Q14146 1524 aaKnown RBP21.31■■□□□ 1
PPP3CA-202ENST00000394853 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
PPP3CA-202ENST00000394853 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
PPP3CA-202ENST00000394853 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
PPP3CA-202ENST00000394853 ABCA10Q8WWZ4 1543 aa21.2■□□□□ 0.98
PPP3CA-202ENST00000394853 ARID3CA6NKF2 412 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms