RNA–Protein interactions for RNA: ENST00000393960.5

PC-203, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PC, Length 4,192 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-203ENST00000393960 NISCHQ9Y2I1 1504 aa19.24■□□□□ 0.67
PC-203ENST00000393960 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
PC-203ENST00000393960 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.31
PC-203ENST00000393960 SUPT5HO00267 1087 aaKnown RBP16.93■□□□□ 0.3
PC-203ENST00000393960 HRCP23327 699 aa16.59■□□□□ 0.25
PC-203ENST00000393960 PPARGC1BQ86YN6 1023 aaKnown RBP16.56■□□□□ 0.24
PC-203ENST00000393960 PCGF6Q9BYE7 350 aa16.46■□□□□ 0.23
PC-203ENST00000393960 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
PC-203ENST00000393960 ZCCHC6Q5VYS8 1495 aaKnown RBP16.16■□□□□ 0.18
PC-203ENST00000393960 CCDC180Q9P1Z9 1646 aa16.15■□□□□ 0.18
PC-203ENST00000393960 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
PC-203ENST00000393960 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
PC-203ENST00000393960 MYO15BQ96JP2 1530 aa15.86■□□□□ 0.13
PC-203ENST00000393960 TRIM41Q8WV44 630 aa15.79■□□□□ 0.12
PC-203ENST00000393960 LOC105371045A0A1W2PR82 267 aa15.74■□□□□ 0.11
PC-203ENST00000393960 FAM9AQ8IZU1 332 aaPredicted RBP15.74■□□□□ 0.11
PC-203ENST00000393960 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
PC-203ENST00000393960 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
PC-203ENST00000393960 TRIM26Q12899 539 aaPredicted RBP15.59■□□□□ 0.09
PC-203ENST00000393960 MYT1Q01538 1121 aa15.55■□□□□ 0.08
PC-203ENST00000393960 ABCC9O60706 1549 aa15.54■□□□□ 0.08
PC-203ENST00000393960 ZEB1P37275 1124 aaPredicted RBP15.48■□□□□ 0.07
PC-203ENST00000393960 NEUROD1Q13562 356 aa15.46■□□□□ 0.07
PC-203ENST00000393960 GTF3C3Q9Y5Q9 886 aa15.46■□□□□ 0.07
PC-203ENST00000393960 SCRIBQ14160 1630 aa15.45■□□□□ 0.06
PC-203ENST00000393960 ACIN1Q9UKV3 1341 aaKnown RBP15.41■□□□□ 0.06
PC-203ENST00000393960 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
PC-203ENST00000393960 CENPBP07199 599 aaPredicted RBP15.27■□□□□ 0.03
PC-203ENST00000393960 YTHDC1Q96MU7 727 aaKnown RBP15.24■□□□□ 0.03
PC-203ENST00000393960 APLP2Q06481 763 aa15.23■□□□□ 0.03
PC-203ENST00000393960 UBTFP17480 764 aaKnown RBP15.22■□□□□ 0.03
PC-203ENST00000393960 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
PC-203ENST00000393960 NACADO15069 1562 aa15.21■□□□□ 0.03
PC-203ENST00000393960 CCER1Q8TC90 406 aaPredicted RBP15.2■□□□□ 0.02
PC-203ENST00000393960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
PC-203ENST00000393960 DIEXFQ68CQ4 756 aaKnown RBP15.14■□□□□ 0.01
PC-203ENST00000393960 RB1CC1Q8TDY2 1594 aa15.08■□□□□ 0.01
PC-203ENST00000393960 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 0
PC-203ENST00000393960 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
PC-203ENST00000393960 RANGAP1P46060 587 aaPredicted RBP14.99□□□□□ -0.01
PC-203ENST00000393960 BAZ1AQ9NRL2 1556 aaPredicted RBP14.91□□□□□ -0.02
PC-203ENST00000393960 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
PC-203ENST00000393960 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
PC-203ENST00000393960 BCL11AQ9H165 835 aa14.83□□□□□ -0.03
PC-203ENST00000393960 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.04
PC-203ENST00000393960 WIZO95785 1651 aa14.75□□□□□ -0.05
PC-203ENST00000393960 MIER1Q8N108 512 aa14.74□□□□□ -0.05
PC-203ENST00000393960 EEA1Q15075 1411 aa14.74□□□□□ -0.05
PC-203ENST00000393960 ZNF316A6NFI3 1004 aaPredicted RBP14.7□□□□□ -0.06
PC-203ENST00000393960 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
PC-203ENST00000393960 CEP162Q5TB80 1403 aa14.65□□□□□ -0.06
PC-203ENST00000393960 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
PC-203ENST00000393960 TNIKQ9UKE5 1360 aa14.64□□□□□ -0.07
PC-203ENST00000393960 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
PC-203ENST00000393960 WRNQ14191 1432 aaPredicted RBP eCLIP14.64□□□□□ -0.07
PC-203ENST00000393960 ANP32EQ9BTT0 268 aa14.63□□□□□ -0.07
PC-203ENST00000393960 GOLGA3Q08378 1498 aa14.61□□□□□ -0.07
PC-203ENST00000393960 ABCC8Q09428 1581 aa14.58□□□□□ -0.08
PC-203ENST00000393960 SMARCA4P51532 1647 aa14.58□□□□□ -0.08
PC-203ENST00000393960 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
PC-203ENST00000393960 SOGA1O94964 1423 aa14.56□□□□□ -0.08
PC-203ENST00000393960 BCANQ96GW7 911 aa14.56□□□□□ -0.08
PC-203ENST00000393960 CLIP1P30622 1438 aa14.53□□□□□ -0.08
PC-203ENST00000393960 ITGAEP38570 1179 aa14.53□□□□□ -0.08
PC-203ENST00000393960 SUPT16HQ9Y5B9 1047 aaKnown RBP14.53□□□□□ -0.08
PC-203ENST00000393960 TSHZ2Q9NRE2 1034 aa14.52□□□□□ -0.09
PC-203ENST00000393960 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.09
PC-203ENST00000393960 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
PC-203ENST00000393960 ATAD2BQ9ULI0 1458 aa14.36□□□□□ -0.11
PC-203ENST00000393960 FAM50AQ14320 339 aaKnown RBP14.34□□□□□ -0.11
PC-203ENST00000393960 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.12
PC-203ENST00000393960 KIF27Q86VH2 1401 aa14.33□□□□□ -0.12
PC-203ENST00000393960 PRKCSHP14314 528 aaPredicted RBP14.32□□□□□ -0.12
PC-203ENST00000393960 VPS8Q8N3P4 1428 aa14.31□□□□□ -0.12
PC-203ENST00000393960 FKBP8Q14318 412 aa14.27□□□□□ -0.13
PC-203ENST00000393960 P3H3Q8IVL6 736 aa14.25□□□□□ -0.13
PC-203ENST00000393960 ERICH6Q7L0X2 663 aa14.22□□□□□ -0.13
PC-203ENST00000393960 KCNH8Q96L42 1107 aa14.21□□□□□ -0.13
PC-203ENST00000393960 RBM19Q9Y4C8 960 aaKnown RBP14.2□□□□□ -0.14
PC-203ENST00000393960 RAPGEF2Q9Y4G8 1499 aa14.19□□□□□ -0.14
PC-203ENST00000393960 NEFLP07196 543 aa14.18□□□□□ -0.14
PC-203ENST00000393960 CLSPNQ9HAW4 1339 aa14.18□□□□□ -0.14
PC-203ENST00000393960 BICRAQ9NZM4 1560 aa14.14□□□□□ -0.15
PC-203ENST00000393960 CUX2O14529 1486 aa14.12□□□□□ -0.15
PC-203ENST00000393960 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
PC-203ENST00000393960 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
PC-203ENST00000393960 KIF21BO75037 1637 aa14.11□□□□□ -0.15
PC-203ENST00000393960 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
PC-203ENST00000393960 CARMIL1Q5VZK9 1371 aa14.09□□□□□ -0.15
PC-203ENST00000393960 CCNB3Q8WWL7 1395 aa14.08□□□□□ -0.16
PC-203ENST00000393960 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.16
PC-203ENST00000393960 NCAPD3P42695 1498 aa14.08□□□□□ -0.16
PC-203ENST00000393960 KANK4Q5T7N3 995 aaPredicted RBP14.08□□□□□ -0.16
PC-203ENST00000393960 TRIM52Q96A61 297 aa14.06□□□□□ -0.16
PC-203ENST00000393960 MSH5O43196 834 aa14.05□□□□□ -0.16
PC-203ENST00000393960 CADPSQ9ULU8 1353 aa14.03□□□□□ -0.16
PC-203ENST00000393960 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
PC-203ENST00000393960 MTUS2Q5JR59 1369 aa14.01□□□□□ -0.17
PC-203ENST00000393960 ANP32CO43423 234 aa14.01□□□□□ -0.17
PC-203ENST00000393960 IRX6P78412 446 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms