RNA–Protein interactions for RNA: ENST00000393892.7

CNP-202, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNP, Length 5,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-202ENST00000393892 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
CNP-202ENST00000393892 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
CNP-202ENST00000393892 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
CNP-202ENST00000393892 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
CNP-202ENST00000393892 EHMT2Q96KQ7 1210 aa21.11■□□□□ 0.97
CNP-202ENST00000393892 APLP2Q06481 763 aa21.06■□□□□ 0.96
CNP-202ENST00000393892 PELP1Q8IZL8 1130 aaKnown RBP20.96■□□□□ 0.95
CNP-202ENST00000393892 FAM9AQ8IZU1 332 aaPredicted RBP20.89■□□□□ 0.93
CNP-202ENST00000393892 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
CNP-202ENST00000393892 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
CNP-202ENST00000393892 PCGF6Q9BYE7 350 aa20.31■□□□□ 0.84
CNP-202ENST00000393892 RANGAP1P46060 587 aaPredicted RBP20.3■□□□□ 0.84
CNP-202ENST00000393892 ATP1B4Q9UN42 357 aaPredicted RBP20.23■□□□□ 0.83
CNP-202ENST00000393892 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
CNP-202ENST00000393892 UBTFP17480 764 aaKnown RBP20.16■□□□□ 0.82
CNP-202ENST00000393892 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
CNP-202ENST00000393892 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
CNP-202ENST00000393892 ERICH6Q7L0X2 663 aa19.98■□□□□ 0.79
CNP-202ENST00000393892 NEFLP07196 543 aa19.8■□□□□ 0.76
CNP-202ENST00000393892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.73
CNP-202ENST00000393892 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.73
CNP-202ENST00000393892 MYT1LQ9UL68 1186 aa19.58■□□□□ 0.72
CNP-202ENST00000393892 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
CNP-202ENST00000393892 YTHDC1Q96MU7 727 aaKnown RBP19.56■□□□□ 0.72
CNP-202ENST00000393892 TRIM26Q12899 539 aaPredicted RBP19.56■□□□□ 0.72
CNP-202ENST00000393892 ITGAEP38570 1179 aa19.45■□□□□ 0.7
CNP-202ENST00000393892 POLR3GLQ9BT43 218 aa19.35■□□□□ 0.69
CNP-202ENST00000393892 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
CNP-202ENST00000393892 DAXXQ9UER7 740 aaPredicted RBP19.25■□□□□ 0.67
CNP-202ENST00000393892 HRCP23327 699 aa19.24■□□□□ 0.67
CNP-202ENST00000393892 MYT1Q01538 1121 aa19.24■□□□□ 0.67
CNP-202ENST00000393892 LOC105371045A0A1W2PR82 267 aa19.22■□□□□ 0.67
CNP-202ENST00000393892 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
CNP-202ENST00000393892 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
CNP-202ENST00000393892 ABCC9O60706 1549 aa19.04■□□□□ 0.64
CNP-202ENST00000393892 FAM50AQ14320 339 aaKnown RBP19.01■□□□□ 0.63
CNP-202ENST00000393892 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
CNP-202ENST00000393892 TRIM52Q96A61 297 aa18.95■□□□□ 0.62
CNP-202ENST00000393892 CLSPNQ9HAW4 1339 aa18.85■□□□□ 0.61
CNP-202ENST00000393892 DIEXFQ68CQ4 756 aaKnown RBP18.84■□□□□ 0.61
CNP-202ENST00000393892 NEUROD1Q13562 356 aa18.77■□□□□ 0.6
CNP-202ENST00000393892 FBLN2P98095 1184 aa18.77■□□□□ 0.6
CNP-202ENST00000393892 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.59
CNP-202ENST00000393892 RTL5Q5HYW3 569 aaPredicted RBP18.7■□□□□ 0.58
CNP-202ENST00000393892 ZNF326Q5BKZ1 582 aaKnown RBP18.69■□□□□ 0.58
CNP-202ENST00000393892 ANP32CO43423 234 aa18.66■□□□□ 0.58
CNP-202ENST00000393892 ZBTB47Q9UFB7 747 aaPredicted RBP18.61■□□□□ 0.57
CNP-202ENST00000393892 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
CNP-202ENST00000393892 CDK11AQ9UQ88 783 aaPredicted RBP18.54■□□□□ 0.56
CNP-202ENST00000393892 NEFMP07197 916 aa18.53■□□□□ 0.56
CNP-202ENST00000393892 P3H3Q8IVL6 736 aa18.51■□□□□ 0.55
CNP-202ENST00000393892 BCANQ96GW7 911 aa18.49■□□□□ 0.55
CNP-202ENST00000393892 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
CNP-202ENST00000393892 CANXP27824 592 aaKnown RBP18.45■□□□□ 0.54
CNP-202ENST00000393892 ZNF777Q9ULD5 760 aaPredicted RBP18.44■□□□□ 0.54
CNP-202ENST00000393892 SLC24A1O60721 1099 aa18.41■□□□□ 0.54
CNP-202ENST00000393892 ESF1Q9H501 851 aaKnown RBP18.38■□□□□ 0.53
CNP-202ENST00000393892 GTF3C3Q9Y5Q9 886 aa18.31■□□□□ 0.52
CNP-202ENST00000393892 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
CNP-202ENST00000393892 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
CNP-202ENST00000393892 STAG3Q9UJ98 1225 aa18.24■□□□□ 0.51
CNP-202ENST00000393892 TONSLQ96HA7 1378 aa18.24■□□□□ 0.51
CNP-202ENST00000393892 BCL11AQ9H165 835 aa18.23■□□□□ 0.51
CNP-202ENST00000393892 CHGAP10645 457 aaKnown RBP18.21■□□□□ 0.51
CNP-202ENST00000393892 ANP32AP39687 249 aaKnown RBP18.14■□□□□ 0.49
CNP-202ENST00000393892 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
CNP-202ENST00000393892 TSPY4P0CV99 314 aa18.07■□□□□ 0.48
CNP-202ENST00000393892 TSPY10P0CW01 314 aa18.07■□□□□ 0.48
CNP-202ENST00000393892 ACIN1Q9UKV3 1341 aaKnown RBP18.06■□□□□ 0.48
CNP-202ENST00000393892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.481e-6■□□□□ 11.2
CNP-202ENST00000393892 CHIC2Q9UKJ5 165 aa18.01■□□□□ 0.47
CNP-202ENST00000393892 MTUS2Q5JR59 1369 aa18■□□□□ 0.47
CNP-202ENST00000393892 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
CNP-202ENST00000393892 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
CNP-202ENST00000393892 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
CNP-202ENST00000393892 UPF2Q9HAU5 1272 aaKnown RBP17.99■□□□□ 0.47
CNP-202ENST00000393892 DCAF1Q9Y4B6 1507 aa17.97■□□□□ 0.47
CNP-202ENST00000393892 NPM2Q86SE8 214 aaKnown RBP17.97■□□□□ 0.47
CNP-202ENST00000393892 DDX10Q13206 875 aaKnown RBP17.97■□□□□ 0.47
CNP-202ENST00000393892 FAM9BQ8IZU0 186 aa17.96■□□□□ 0.47
CNP-202ENST00000393892 HSP90AA1P07900 732 aaKnown RBP17.96■□□□□ 0.47
CNP-202ENST00000393892 TMC1Q8TDI8 760 aa17.95■□□□□ 0.46
CNP-202ENST00000393892 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.94■□□□□ 0.46
CNP-202ENST00000393892 FKBP8Q14318 412 aa17.93■□□□□ 0.46
CNP-202ENST00000393892 WDR43Q15061 677 aaKnown RBP eCLIP17.92■□□□□ 0.46
CNP-202ENST00000393892 ANP32BQ92688 251 aaKnown RBP17.92■□□□□ 0.46
CNP-202ENST00000393892 CCDC180Q9P1Z9 1646 aa17.89■□□□□ 0.45
CNP-202ENST00000393892 KDM2AQ9Y2K7 1162 aa17.87■□□□□ 0.45
CNP-202ENST00000393892 CLIP1P30622 1438 aa17.87■□□□□ 0.45
CNP-202ENST00000393892 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
CNP-202ENST00000393892 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
CNP-202ENST00000393892 RB1CC1Q8TDY2 1594 aa17.83■□□□□ 0.45
CNP-202ENST00000393892 RSF1Q96T23 1441 aaPredicted RBP17.83■□□□□ 0.45
CNP-202ENST00000393892 MRS2Q9HD23 443 aa17.83■□□□□ 0.44
CNP-202ENST00000393892 EEA1Q15075 1411 aa17.82■□□□□ 0.44
CNP-202ENST00000393892 CCDC136Q96JN2 1154 aa17.81■□□□□ 0.44
CNP-202ENST00000393892 PLEKHD1A6NEE1 506 aa17.81■□□□□ 0.44
CNP-202ENST00000393892 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.44
CNP-202ENST00000393892 PPP1R15AO75807 674 aaPredicted RBP17.76■□□□□ 0.43
CNP-202ENST00000393892 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms