RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
MDM2-208ENST00000393410 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
MDM2-208ENST00000393410 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
MDM2-208ENST00000393410 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
MDM2-208ENST00000393410 FOXD1Q16676 465 aa15.3■□□□□ 0.04
MDM2-208ENST00000393410 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
MDM2-208ENST00000393410 PPP6R1Q9UPN7 881 aa14.68□□□□□ -0.06
MDM2-208ENST00000393410 ADRA2BP18089 450 aa14.63□□□□□ -0.07
MDM2-208ENST00000393410 PIAS4Q8N2W9 510 aaPredicted RBP14.36□□□□□ -0.11
MDM2-208ENST00000393410 MSH5O43196 834 aa14.07□□□□□ -0.16
MDM2-208ENST00000393410 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
MDM2-208ENST00000393410 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
MDM2-208ENST00000393410 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
MDM2-208ENST00000393410 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
MDM2-208ENST00000393410 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
MDM2-208ENST00000393410 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
MDM2-208ENST00000393410 KCNA4P22459 653 aa13□□□□□ -0.33
MDM2-208ENST00000393410 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
MDM2-208ENST00000393410 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
MDM2-208ENST00000393410 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
MDM2-208ENST00000393410 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
MDM2-208ENST00000393410 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
MDM2-208ENST00000393410 DNAJC5BQ9UF47 199 aa12.46□□□□□ -0.41
MDM2-208ENST00000393410 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
MDM2-208ENST00000393410 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
MDM2-208ENST00000393410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.461e-8■■□□□ 11.6
MDM2-208ENST00000393410 RNF39Q9H2S5 420 aa12.09□□□□□ -0.47
MDM2-208ENST00000393410 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
MDM2-208ENST00000393410 ZBTB22O15209 634 aa11.99□□□□□ -0.49
MDM2-208ENST00000393410 FOXD4L1Q9NU39 408 aa11.94□□□□□ -0.5
MDM2-208ENST00000393410 C1QBPQ07021 282 aaKnown RBP11.9□□□□□ -0.5
MDM2-208ENST00000393410 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
MDM2-208ENST00000393410 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
MDM2-208ENST00000393410 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
MDM2-208ENST00000393410 CSRNP3Q8WYN3 585 aa11.81□□□□□ -0.52
MDM2-208ENST00000393410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.53
MDM2-208ENST00000393410 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.53
MDM2-208ENST00000393410 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
MDM2-208ENST00000393410 SAMD1Q6SPF0 538 aaPredicted RBP11.69□□□□□ -0.54
MDM2-208ENST00000393410 CAPN15O75808 1086 aa11.61□□□□□ -0.55
MDM2-208ENST00000393410 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
MDM2-208ENST00000393410 APLP2Q06481 763 aa11.59□□□□□ -0.55
MDM2-208ENST00000393410 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
MDM2-208ENST00000393410 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.57
MDM2-208ENST00000393410 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
MDM2-208ENST00000393410 DSG3P32926 999 aa11.47□□□□□ -0.57
MDM2-208ENST00000393410 ABCB7O75027 752 aa11.43□□□□□ -0.58
MDM2-208ENST00000393410 POLA2Q14181 598 aa11.35□□□□□ -0.59
MDM2-208ENST00000393410 MKRN4PQ13434 485 aaPredicted RBP11.08□□□□□ -0.64
MDM2-208ENST00000393410 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
MDM2-208ENST00000393410 FBLN2P98095 1184 aa11.01□□□□□ -0.65
MDM2-208ENST00000393410 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
MDM2-208ENST00000393410 RBM42Q9BTD8 480 aaKnown RBP10.87□□□□□ -0.67
MDM2-208ENST00000393410 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
MDM2-208ENST00000393410 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
MDM2-208ENST00000393410 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
MDM2-208ENST00000393410 ZNF692Q9BU19 519 aaPredicted RBP10.76□□□□□ -0.69
MDM2-208ENST00000393410 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
MDM2-208ENST00000393410 AKT1S1Q96B36 256 aa10.74□□□□□ -0.69
MDM2-208ENST00000393410 SPDYE4A6NLX3 237 aa10.72□□□□□ -0.69
MDM2-208ENST00000393410 REM2Q8IYK8 340 aaPredicted RBP10.67□□□□□ -0.7
MDM2-208ENST00000393410 FKBP8Q14318 412 aa10.64□□□□□ -0.71
MDM2-208ENST00000393410 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
MDM2-208ENST00000393410 PITPNM1O00562 1244 aa10.56□□□□□ -0.72
MDM2-208ENST00000393410 PROM2Q8N271 834 aa10.56□□□□□ -0.72
MDM2-208ENST00000393410 CHRDL2Q6WN34 429 aa10.51□□□□□ -0.73
MDM2-208ENST00000393410 SPDYE1Q8NFV5 336 aaPredicted RBP10.51□□□□□ -0.73
MDM2-208ENST00000393410 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
MDM2-208ENST00000393410 FXR2P51116 673 aaKnown RBP eCLIP10.38□□□□□ -0.75
MDM2-208ENST00000393410 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
MDM2-208ENST00000393410 STAG3Q9UJ98 1225 aa10.37□□□□□ -0.75
MDM2-208ENST00000393410 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
MDM2-208ENST00000393410 POTEHQ6S545 545 aa10.3□□□□□ -0.76
MDM2-208ENST00000393410 CHADLQ6NUI6 762 aa10.28□□□□□ -0.76
MDM2-208ENST00000393410 PRKAR2AP13861 404 aaKnown RBP10.27□□□□□ -0.77
MDM2-208ENST00000393410 CREBZFQ9NS37 354 aa10.26□□□□□ -0.77
MDM2-208ENST00000393410 FBXO3Q9UK99 471 aa10.23□□□□□ -0.77
MDM2-208ENST00000393410 MIER1Q8N108 512 aa10.17□□□□□ -0.78
MDM2-208ENST00000393410 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
MDM2-208ENST00000393410 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
MDM2-208ENST00000393410 FARP1Q9Y4F1 1045 aaPredicted RBP10.15□□□□□ -0.78
MDM2-208ENST00000393410 PLCD3Q8N3E9 789 aa10.13□□□□□ -0.79
MDM2-208ENST00000393410 PLEKHG5O94827 1062 aa10.05□□□□□ -0.8
MDM2-208ENST00000393410 HAX1O00165 279 aa10.04□□□□□ -0.8
MDM2-208ENST00000393410 C19orf67A6NJJ6 358 aa10.03□□□□□ -0.8
MDM2-208ENST00000393410 EVX2Q03828 476 aa10.03□□□□□ -0.8
MDM2-208ENST00000393410 IFNLR1Q8IU57 520 aaPredicted RBP10.03□□□□□ -0.8
MDM2-208ENST00000393410 NPM1P06748 294 aaKnown RBP eCLIP10□□□□□ -0.81
MDM2-208ENST00000393410 KLHL34Q8N239 644 aa9.97□□□□□ -0.81
MDM2-208ENST00000393410 ZBTB47Q9UFB7 747 aaPredicted RBP9.97□□□□□ -0.81
MDM2-208ENST00000393410 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
MDM2-208ENST00000393410 NUBP1P53384 320 aa9.96□□□□□ -0.82
MDM2-208ENST00000393410 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
MDM2-208ENST00000393410 ZRANB1Q9UGI0 708 aa9.9□□□□□ -0.82
MDM2-208ENST00000393410 SPOCK2Q92563 424 aa9.89□□□□□ -0.83
MDM2-208ENST00000393410 TSPYL2Q9H2G4 693 aaPredicted RBP9.89□□□□□ -0.83
MDM2-208ENST00000393410 SP7Q8TDD2 431 aaPredicted RBP9.85□□□□□ -0.83
MDM2-208ENST00000393410 PAK3O75914 559 aaPredicted RBP9.84□□□□□ -0.83
MDM2-208ENST00000393410 ZNF579Q8NAF0 562 aaKnown RBP9.83□□□□□ -0.84
MDM2-208ENST00000393410 PHF12Q96QT6 1004 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms