RNA–Protein interactions for RNA: ENST00000392953.8

ARHGEF4-203, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ARHGEF4, Length 3,800 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-203ENST00000392953 NISCHQ9Y2I1 1504 aa24.42■■□□□ 1.5
ARHGEF4-203ENST00000392953 DCAF8L2P0C7V8 631 aa22.19■■□□□ 1.14
ARHGEF4-203ENST00000392953 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
ARHGEF4-203ENST00000392953 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
ARHGEF4-203ENST00000392953 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
ARHGEF4-203ENST00000392953 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
ARHGEF4-203ENST00000392953 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
ARHGEF4-203ENST00000392953 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
ARHGEF4-203ENST00000392953 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
ARHGEF4-203ENST00000392953 HRCP23327 699 aa20.12■□□□□ 0.81
ARHGEF4-203ENST00000392953 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
ARHGEF4-203ENST00000392953 PCGF6Q9BYE7 350 aa19.97■□□□□ 0.79
ARHGEF4-203ENST00000392953 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
ARHGEF4-203ENST00000392953 PPARGC1BQ86YN6 1023 aaKnown RBP19.64■□□□□ 0.74
ARHGEF4-203ENST00000392953 ABCC9O60706 1549 aa19.57■□□□□ 0.72
ARHGEF4-203ENST00000392953 TRIM26Q12899 539 aaPredicted RBP19.53■□□□□ 0.72
ARHGEF4-203ENST00000392953 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
ARHGEF4-203ENST00000392953 RSF1Q96T23 1441 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF4-203ENST00000392953 SCRIBQ14160 1630 aa19.42■□□□□ 0.7
ARHGEF4-203ENST00000392953 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
ARHGEF4-203ENST00000392953 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
ARHGEF4-203ENST00000392953 RANGAP1P46060 587 aaPredicted RBP19.3■□□□□ 0.68
ARHGEF4-203ENST00000392953 TTBK1Q5TCY1 1321 aaPredicted RBP19.29■□□□□ 0.68
ARHGEF4-203ENST00000392953 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF4-203ENST00000392953 RB1CC1Q8TDY2 1594 aa19.25■□□□□ 0.67
ARHGEF4-203ENST00000392953 NACADO15069 1562 aa19.04■□□□□ 0.64
ARHGEF4-203ENST00000392953 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
ARHGEF4-203ENST00000392953 MROH2BQ7Z745 1585 aa18.99■□□□□ 0.63
ARHGEF4-203ENST00000392953 WIZO95785 1651 aa18.89■□□□□ 0.61
ARHGEF4-203ENST00000392953 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
ARHGEF4-203ENST00000392953 CCER1Q8TC90 406 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF4-203ENST00000392953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF4-203ENST00000392953 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
ARHGEF4-203ENST00000392953 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
ARHGEF4-203ENST00000392953 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
ARHGEF4-203ENST00000392953 TOP2AP11388 1531 aaKnown RBP18.62■□□□□ 0.57
ARHGEF4-203ENST00000392953 ABCC8Q09428 1581 aa18.58■□□□□ 0.57
ARHGEF4-203ENST00000392953 ATP1B4Q9UN42 357 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF4-203ENST00000392953 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
ARHGEF4-203ENST00000392953 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
ARHGEF4-203ENST00000392953 CEP162Q5TB80 1403 aa18.54■□□□□ 0.56
ARHGEF4-203ENST00000392953 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
ARHGEF4-203ENST00000392953 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
ARHGEF4-203ENST00000392953 TNIKQ9UKE5 1360 aa18.49■□□□□ 0.55
ARHGEF4-203ENST00000392953 SOGA1O94964 1423 aa18.48■□□□□ 0.55
ARHGEF4-203ENST00000392953 EEA1Q15075 1411 aa18.46■□□□□ 0.55
ARHGEF4-203ENST00000392953 UBTFP17480 764 aaKnown RBP18.46■□□□□ 0.55
ARHGEF4-203ENST00000392953 DIEXFQ68CQ4 756 aaKnown RBP18.45■□□□□ 0.54
ARHGEF4-203ENST00000392953 ACIN1Q9UKV3 1341 aaKnown RBP18.45■□□□□ 0.54
ARHGEF4-203ENST00000392953 CSRNP3Q8WYN3 585 aa18.45■□□□□ 0.54
ARHGEF4-203ENST00000392953 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.54
ARHGEF4-203ENST00000392953 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
ARHGEF4-203ENST00000392953 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
ARHGEF4-203ENST00000392953 RUSC2Q8N2Y8 1516 aa18.35■□□□□ 0.53
ARHGEF4-203ENST00000392953 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
ARHGEF4-203ENST00000392953 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF4-203ENST00000392953 GTF3C3Q9Y5Q9 886 aa18.25■□□□□ 0.51
ARHGEF4-203ENST00000392953 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
ARHGEF4-203ENST00000392953 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
ARHGEF4-203ENST00000392953 CLIP1P30622 1438 aa18.16■□□□□ 0.5
ARHGEF4-203ENST00000392953 APLP2Q06481 763 aa18.15■□□□□ 0.5
ARHGEF4-203ENST00000392953 KIF21BO75037 1637 aa18.14■□□□□ 0.49
ARHGEF4-203ENST00000392953 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
ARHGEF4-203ENST00000392953 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
ARHGEF4-203ENST00000392953 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
ARHGEF4-203ENST00000392953 VPS8Q8N3P4 1428 aa18.09■□□□□ 0.49
ARHGEF4-203ENST00000392953 YTHDC1Q96MU7 727 aaKnown RBP18.07■□□□□ 0.48
ARHGEF4-203ENST00000392953 BAZ1BQ9UIG0 1483 aaKnown RBP18.06■□□□□ 0.48
ARHGEF4-203ENST00000392953 ARID3CA6NKF2 412 aa18.05■□□□□ 0.48
ARHGEF4-203ENST00000392953 ITGAEP38570 1179 aa18.05■□□□□ 0.48
ARHGEF4-203ENST00000392953 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
ARHGEF4-203ENST00000392953 FBLN2P98095 1184 aa18.02■□□□□ 0.48
ARHGEF4-203ENST00000392953 RAPGEF2Q9Y4G8 1499 aa18.01■□□□□ 0.47
ARHGEF4-203ENST00000392953 MIER1Q8N108 512 aa17.99■□□□□ 0.47
ARHGEF4-203ENST00000392953 P3H3Q8IVL6 736 aa17.9■□□□□ 0.46
ARHGEF4-203ENST00000392953 TOP2BQ02880 1626 aa17.88■□□□□ 0.45
ARHGEF4-203ENST00000392953 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
ARHGEF4-203ENST00000392953 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
ARHGEF4-203ENST00000392953 MYT1Q01538 1121 aa17.81■□□□□ 0.44
ARHGEF4-203ENST00000392953 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
ARHGEF4-203ENST00000392953 PRXQ9BXM0 1461 aa17.79■□□□□ 0.44
ARHGEF4-203ENST00000392953 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
ARHGEF4-203ENST00000392953 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
ARHGEF4-203ENST00000392953 KANK4Q5T7N3 995 aaPredicted RBP17.75■□□□□ 0.43
ARHGEF4-203ENST00000392953 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
ARHGEF4-203ENST00000392953 RRBP1Q9P2E9 1410 aaKnown RBP17.68■□□□□ 0.42
ARHGEF4-203ENST00000392953 CUX1P39880 1505 aa17.67■□□□□ 0.42
ARHGEF4-203ENST00000392953 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
ARHGEF4-203ENST00000392953 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
ARHGEF4-203ENST00000392953 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
ARHGEF4-203ENST00000392953 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
ARHGEF4-203ENST00000392953 MYT1LQ9UL68 1186 aa17.62■□□□□ 0.41
ARHGEF4-203ENST00000392953 ARHGAP35Q9NRY4 1499 aa17.59■□□□□ 0.41
ARHGEF4-203ENST00000392953 CUX2O14529 1486 aa17.59■□□□□ 0.41
ARHGEF4-203ENST00000392953 CFTRP13569 1480 aa17.55■□□□□ 0.4
ARHGEF4-203ENST00000392953 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
ARHGEF4-203ENST00000392953 RAB3GAP2Q9H2M9 1393 aa17.5■□□□□ 0.39
ARHGEF4-203ENST00000392953 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
ARHGEF4-203ENST00000392953 IGF1RP08069 1367 aa17.46■□□□□ 0.39
ARHGEF4-203ENST00000392953 TIAM1Q13009 1591 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms