RNA–Protein interactions for RNA: ENST00000392647.6

KLHL23-202, Transcript of kelch like family member 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL23, Length 4,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL23-202ENST00000392647 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
KLHL23-202ENST00000392647 DCAF8L2P0C7V8 631 aa23.16■■□□□ 1.3
KLHL23-202ENST00000392647 SHROOM4Q9ULL8 1493 aa22.61■■□□□ 1.21
KLHL23-202ENST00000392647 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
KLHL23-202ENST00000392647 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
KLHL23-202ENST00000392647 FAM9AQ8IZU1 332 aaPredicted RBP21.02■□□□□ 0.96
KLHL23-202ENST00000392647 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
KLHL23-202ENST00000392647 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.92
KLHL23-202ENST00000392647 TRIM41Q8WV44 630 aa20.77■□□□□ 0.92
KLHL23-202ENST00000392647 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
KLHL23-202ENST00000392647 ABCC9O60706 1549 aa20.67■□□□□ 0.9
KLHL23-202ENST00000392647 LOC105371045A0A1W2PR82 267 aa20.6■□□□□ 0.89
KLHL23-202ENST00000392647 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
KLHL23-202ENST00000392647 TTBK1Q5TCY1 1321 aaPredicted RBP20.48■□□□□ 0.87
KLHL23-202ENST00000392647 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
KLHL23-202ENST00000392647 RANGAP1P46060 587 aaPredicted RBP20.25■□□□□ 0.83
KLHL23-202ENST00000392647 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
KLHL23-202ENST00000392647 SCRIBQ14160 1630 aa20.18■□□□□ 0.82
KLHL23-202ENST00000392647 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
KLHL23-202ENST00000392647 APLP2Q06481 763 aa20.11■□□□□ 0.81
KLHL23-202ENST00000392647 HRCP23327 699 aa20.09■□□□□ 0.81
KLHL23-202ENST00000392647 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
KLHL23-202ENST00000392647 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
KLHL23-202ENST00000392647 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
KLHL23-202ENST00000392647 ZEB1P37275 1124 aaPredicted RBP19.85■□□□□ 0.77
KLHL23-202ENST00000392647 DCAF1Q9Y4B6 1507 aa19.82■□□□□ 0.76
KLHL23-202ENST00000392647 RSF1Q96T23 1441 aaPredicted RBP19.81■□□□□ 0.76
KLHL23-202ENST00000392647 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
KLHL23-202ENST00000392647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.61■□□□□ 0.73
KLHL23-202ENST00000392647 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
KLHL23-202ENST00000392647 NACADO15069 1562 aa19.59■□□□□ 0.73
KLHL23-202ENST00000392647 HNRNPUL2Q1KMD3 747 aaKnown RBP19.55■□□□□ 0.72
KLHL23-202ENST00000392647 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
KLHL23-202ENST00000392647 CSRNP3Q8WYN3 585 aa19.48■□□□□ 0.71
KLHL23-202ENST00000392647 ITGAEP38570 1179 aa19.43■□□□□ 0.7
KLHL23-202ENST00000392647 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
KLHL23-202ENST00000392647 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
KLHL23-202ENST00000392647 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
KLHL23-202ENST00000392647 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
KLHL23-202ENST00000392647 WIZO95785 1651 aa19.13■□□□□ 0.65
KLHL23-202ENST00000392647 DIEXFQ68CQ4 756 aaKnown RBP19.08■□□□□ 0.64
KLHL23-202ENST00000392647 P3H3Q8IVL6 736 aa19.06■□□□□ 0.64
KLHL23-202ENST00000392647 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
KLHL23-202ENST00000392647 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
KLHL23-202ENST00000392647 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.64
KLHL23-202ENST00000392647 FAM50AQ14320 339 aaKnown RBP19.01■□□□□ 0.63
KLHL23-202ENST00000392647 ABCC8Q09428 1581 aa19.01■□□□□ 0.63
KLHL23-202ENST00000392647 SOGA1O94964 1423 aa19■□□□□ 0.63
KLHL23-202ENST00000392647 CEP162Q5TB80 1403 aa18.99■□□□□ 0.63
KLHL23-202ENST00000392647 CLIP1P30622 1438 aa18.9■□□□□ 0.62
KLHL23-202ENST00000392647 EEA1Q15075 1411 aa18.88■□□□□ 0.61
KLHL23-202ENST00000392647 GOLGA3Q08378 1498 aa18.86■□□□□ 0.61
KLHL23-202ENST00000392647 TNIKQ9UKE5 1360 aa18.86■□□□□ 0.61
KLHL23-202ENST00000392647 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
KLHL23-202ENST00000392647 NEUROD1Q13562 356 aa18.82■□□□□ 0.6
KLHL23-202ENST00000392647 PELP1Q8IZL8 1130 aaKnown RBP18.8■□□□□ 0.6
KLHL23-202ENST00000392647 ZNF316A6NFI3 1004 aaPredicted RBP18.8■□□□□ 0.6
KLHL23-202ENST00000392647 ARID3CA6NKF2 412 aa18.79■□□□□ 0.6
KLHL23-202ENST00000392647 SMARCA4P51532 1647 aa18.79■□□□□ 0.6
KLHL23-202ENST00000392647 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
KLHL23-202ENST00000392647 FBLN2P98095 1184 aa18.71■□□□□ 0.59
KLHL23-202ENST00000392647 RUSC2Q8N2Y8 1516 aa18.7■□□□□ 0.58
KLHL23-202ENST00000392647 ATAD2BQ9ULI0 1458 aa18.67■□□□□ 0.58
KLHL23-202ENST00000392647 TRIM52Q96A61 297 aa18.64■□□□□ 0.57
KLHL23-202ENST00000392647 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
KLHL23-202ENST00000392647 SMARCA2P51531 1590 aa18.63■□□□□ 0.57
KLHL23-202ENST00000392647 CNGB1Q14028 1251 aaPredicted RBP18.6■□□□□ 0.57
KLHL23-202ENST00000392647 GTF3C3Q9Y5Q9 886 aa18.6■□□□□ 0.57
KLHL23-202ENST00000392647 POLR3GLQ9BT43 218 aa18.59■□□□□ 0.57
KLHL23-202ENST00000392647 ACIN1Q9UKV3 1341 aaKnown RBP18.53■□□□□ 0.56
KLHL23-202ENST00000392647 NEFLP07196 543 aa18.5■□□□□ 0.55
KLHL23-202ENST00000392647 CUX2O14529 1486 aa18.49■□□□□ 0.55
KLHL23-202ENST00000392647 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.55
KLHL23-202ENST00000392647 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
KLHL23-202ENST00000392647 VPS8Q8N3P4 1428 aa18.46■□□□□ 0.55
KLHL23-202ENST00000392647 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
KLHL23-202ENST00000392647 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
KLHL23-202ENST00000392647 MYT1LQ9UL68 1186 aa18.42■□□□□ 0.54
KLHL23-202ENST00000392647 MIER1Q8N108 512 aa18.41■□□□□ 0.54
KLHL23-202ENST00000392647 ZNF777Q9ULD5 760 aaPredicted RBP18.4■□□□□ 0.54
KLHL23-202ENST00000392647 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
KLHL23-202ENST00000392647 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
KLHL23-202ENST00000392647 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
KLHL23-202ENST00000392647 HIRIP3Q9BW71 556 aaPredicted RBP18.34■□□□□ 0.53
KLHL23-202ENST00000392647 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
KLHL23-202ENST00000392647 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
KLHL23-202ENST00000392647 ANP32CO43423 234 aa18.29■□□□□ 0.52
KLHL23-202ENST00000392647 BICRAQ9NZM4 1560 aa18.28■□□□□ 0.52
KLHL23-202ENST00000392647 CDK11AQ9UQ88 783 aaPredicted RBP18.28■□□□□ 0.52
KLHL23-202ENST00000392647 TONSLQ96HA7 1378 aa18.28■□□□□ 0.52
KLHL23-202ENST00000392647 CCNB3Q8WWL7 1395 aa18.27■□□□□ 0.52
KLHL23-202ENST00000392647 RRP7BPQ9NSQ0 103 aa18.27■□□□□ 0.51
KLHL23-202ENST00000392647 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
KLHL23-202ENST00000392647 BCANQ96GW7 911 aa18.25■□□□□ 0.51
KLHL23-202ENST00000392647 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
KLHL23-202ENST00000392647 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
KLHL23-202ENST00000392647 SIN3AQ96ST3 1273 aa18.23■□□□□ 0.51
KLHL23-202ENST00000392647 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
KLHL23-202ENST00000392647 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
KLHL23-202ENST00000392647 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms