RNA–Protein interactions for RNA: ENST00000392549.6

RNFT2-203, Transcript of ring finger protein, transmembrane 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNFT2, Length 2,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2-203ENST00000392549 NISCHQ9Y2I1 1504 aa32.77■■■□□ 2.84
RNFT2-203ENST00000392549 CCDC180Q9P1Z9 1646 aa27.97■■■□□ 2.07
RNFT2-203ENST00000392549 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
RNFT2-203ENST00000392549 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
RNFT2-203ENST00000392549 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
RNFT2-203ENST00000392549 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
RNFT2-203ENST00000392549 DCAF1Q9Y4B6 1507 aa26.81■■□□□ 1.88
RNFT2-203ENST00000392549 ABCC9O60706 1549 aa26.54■■□□□ 1.84
RNFT2-203ENST00000392549 SCRIBQ14160 1630 aa26.25■■□□□ 1.79
RNFT2-203ENST00000392549 MYO15BQ96JP2 1530 aa26.22■■□□□ 1.79
RNFT2-203ENST00000392549 PELP1Q8IZL8 1130 aaKnown RBP26.07■■□□□ 1.76
RNFT2-203ENST00000392549 NACADO15069 1562 aa26.05■■□□□ 1.76
RNFT2-203ENST00000392549 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
RNFT2-203ENST00000392549 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
RNFT2-203ENST00000392549 RB1CC1Q8TDY2 1594 aa25.74■■□□□ 1.71
RNFT2-203ENST00000392549 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
RNFT2-203ENST00000392549 HRCP23327 699 aa25.5■■□□□ 1.67
RNFT2-203ENST00000392549 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
RNFT2-203ENST00000392549 PABPN1Q86U42 306 aaKnown RBP eCLIP25.37■■□□□ 1.65
RNFT2-203ENST00000392549 MYT1Q01538 1121 aa25.32■■□□□ 1.64
RNFT2-203ENST00000392549 UNC13AQ9UPW8 1703 aa25.3■■□□□ 1.64
RNFT2-203ENST00000392549 WIZO95785 1651 aa25.29■■□□□ 1.64
RNFT2-203ENST00000392549 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.62
RNFT2-203ENST00000392549 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
RNFT2-203ENST00000392549 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
RNFT2-203ENST00000392549 BICRAQ9NZM4 1560 aa25.08■■□□□ 1.61
RNFT2-203ENST00000392549 PPARGC1BQ86YN6 1023 aaKnown RBP25.07■■□□□ 1.6
RNFT2-203ENST00000392549 SMARCA4P51532 1647 aa25.02■■□□□ 1.6
RNFT2-203ENST00000392549 FAM9AQ8IZU1 332 aaPredicted RBP24.95■■□□□ 1.58
RNFT2-203ENST00000392549 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
RNFT2-203ENST00000392549 CCDC88BA6NC98 1476 aa24.81■■□□□ 1.56
RNFT2-203ENST00000392549 EHMT2Q96KQ7 1210 aa24.8■■□□□ 1.56
RNFT2-203ENST00000392549 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
RNFT2-203ENST00000392549 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
RNFT2-203ENST00000392549 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
RNFT2-203ENST00000392549 PCGF6Q9BYE7 350 aa24.62■■□□□ 1.53
RNFT2-203ENST00000392549 ABCC8Q09428 1581 aa24.57■■□□□ 1.52
RNFT2-203ENST00000392549 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
RNFT2-203ENST00000392549 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
RNFT2-203ENST00000392549 BAZ1BQ9UIG0 1483 aaKnown RBP24.46■■□□□ 1.51
RNFT2-203ENST00000392549 SOGA1O94964 1423 aa24.29■■□□□ 1.48
RNFT2-203ENST00000392549 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.47
RNFT2-203ENST00000392549 TRIM26Q12899 539 aaPredicted RBP24.21■■□□□ 1.47
RNFT2-203ENST00000392549 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
RNFT2-203ENST00000392549 NCAPD3P42695 1498 aa24.17■■□□□ 1.46
RNFT2-203ENST00000392549 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
RNFT2-203ENST00000392549 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
RNFT2-203ENST00000392549 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
RNFT2-203ENST00000392549 TTBK1Q5TCY1 1321 aaPredicted RBP24.04■■□□□ 1.44
RNFT2-203ENST00000392549 UBTFP17480 764 aaKnown RBP24.02■■□□□ 1.44
RNFT2-203ENST00000392549 EEA1Q15075 1411 aa23.96■■□□□ 1.43
RNFT2-203ENST00000392549 CEP162Q5TB80 1403 aa23.88■■□□□ 1.41
RNFT2-203ENST00000392549 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
RNFT2-203ENST00000392549 CFTRP13569 1480 aa23.83■■□□□ 1.41
RNFT2-203ENST00000392549 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
RNFT2-203ENST00000392549 GOLGA3Q08378 1498 aa23.8■■□□□ 1.4
RNFT2-203ENST00000392549 TOP2BQ02880 1626 aa23.8■■□□□ 1.4
RNFT2-203ENST00000392549 ACIN1Q9UKV3 1341 aaKnown RBP23.78■■□□□ 1.4
RNFT2-203ENST00000392549 RANGAP1P46060 587 aaPredicted RBP23.75■■□□□ 1.39
RNFT2-203ENST00000392549 BCL11AQ9H165 835 aa23.75■■□□□ 1.39
RNFT2-203ENST00000392549 CUX1P39880 1505 aa23.73■■□□□ 1.39
RNFT2-203ENST00000392549 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
RNFT2-203ENST00000392549 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
RNFT2-203ENST00000392549 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
RNFT2-203ENST00000392549 GTF3C3Q9Y5Q9 886 aa23.7■■□□□ 1.38
RNFT2-203ENST00000392549 RAPGEF2Q9Y4G8 1499 aa23.69■■□□□ 1.38
RNFT2-203ENST00000392549 BIVM-ERCC5R4GMW8 1640 aa23.68■■□□□ 1.38
RNFT2-203ENST00000392549 PRKCSHP14314 528 aaPredicted RBP23.64■■□□□ 1.38
RNFT2-203ENST00000392549 KIF21BO75037 1637 aa23.63■■□□□ 1.37
RNFT2-203ENST00000392549 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.36
RNFT2-203ENST00000392549 CLIP1P30622 1438 aa23.56■■□□□ 1.36
RNFT2-203ENST00000392549 KIF27Q86VH2 1401 aa23.51■■□□□ 1.35
RNFT2-203ENST00000392549 NESP48681 1621 aa23.49■■□□□ 1.35
RNFT2-203ENST00000392549 PRXQ9BXM0 1461 aa23.48■■□□□ 1.35
RNFT2-203ENST00000392549 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
RNFT2-203ENST00000392549 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.35
RNFT2-203ENST00000392549 CENPBP07199 599 aaPredicted RBP23.45■■□□□ 1.34
RNFT2-203ENST00000392549 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
RNFT2-203ENST00000392549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.43■■□□□ 1.34
RNFT2-203ENST00000392549 CUX2O14529 1486 aa23.42■■□□□ 1.34
RNFT2-203ENST00000392549 FGD5Q6ZNL6 1462 aa23.4■■□□□ 1.34
RNFT2-203ENST00000392549 IGF1RP08069 1367 aa23.36■■□□□ 1.33
RNFT2-203ENST00000392549 VPS8Q8N3P4 1428 aa23.36■■□□□ 1.33
RNFT2-203ENST00000392549 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
RNFT2-203ENST00000392549 APLP2Q06481 763 aa23.32■■□□□ 1.32
RNFT2-203ENST00000392549 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
RNFT2-203ENST00000392549 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
RNFT2-203ENST00000392549 CARMIL1Q5VZK9 1371 aa23.24■■□□□ 1.31
RNFT2-203ENST00000392549 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
RNFT2-203ENST00000392549 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
RNFT2-203ENST00000392549 POLA1P09884 1462 aaPredicted RBP23.2■■□□□ 1.3
RNFT2-203ENST00000392549 HNRNPUL2Q1KMD3 747 aaKnown RBP23.19■■□□□ 1.3
RNFT2-203ENST00000392549 DNMBPQ6XZF7 1577 aa23.19■■□□□ 1.3
RNFT2-203ENST00000392549 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
RNFT2-203ENST00000392549 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
RNFT2-203ENST00000392549 URB2Q14146 1524 aaKnown RBP23.14■■□□□ 1.29
RNFT2-203ENST00000392549 ARHGAP35Q9NRY4 1499 aa23.12■■□□□ 1.29
RNFT2-203ENST00000392549 PDS5BQ9NTI5 1447 aa23.1■■□□□ 1.29
RNFT2-203ENST00000392549 ABCA10Q8WWZ4 1543 aa23.08■■□□□ 1.29
RNFT2-203ENST00000392549 P3H3Q8IVL6 736 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms