RNA–Protein interactions for RNA: ENST00000392451.6

TRIM46-205, Transcript of tripartite motif containing 46, humanhuman

TSL 2 BASIC

Gene TRIM46, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-205ENST00000392451 NISCHQ9Y2I1 1504 aa27.75■■■□□ 2.03
TRIM46-205ENST00000392451 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
TRIM46-205ENST00000392451 CCDC180Q9P1Z9 1646 aa23.58■■□□□ 1.37
TRIM46-205ENST00000392451 ZCCHC6Q5VYS8 1495 aaKnown RBP23.52■■□□□ 1.36
TRIM46-205ENST00000392451 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.34
TRIM46-205ENST00000392451 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
TRIM46-205ENST00000392451 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
TRIM46-205ENST00000392451 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
TRIM46-205ENST00000392451 MYO15BQ96JP2 1530 aa22.69■■□□□ 1.22
TRIM46-205ENST00000392451 HRCP23327 699 aa22.59■■□□□ 1.21
TRIM46-205ENST00000392451 PCGF6Q9BYE7 350 aa22.37■■□□□ 1.17
TRIM46-205ENST00000392451 ABCC9O60706 1549 aa22.24■■□□□ 1.15
TRIM46-205ENST00000392451 LOC105371045A0A1W2PR82 267 aa22.09■■□□□ 1.13
TRIM46-205ENST00000392451 TRIM26Q12899 539 aaPredicted RBP22.03■■□□□ 1.12
TRIM46-205ENST00000392451 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
TRIM46-205ENST00000392451 SCRIBQ14160 1630 aa22■■□□□ 1.11
TRIM46-205ENST00000392451 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
TRIM46-205ENST00000392451 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
TRIM46-205ENST00000392451 PPARGC1BQ86YN6 1023 aaKnown RBP21.87■■□□□ 1.09
TRIM46-205ENST00000392451 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
TRIM46-205ENST00000392451 NACADO15069 1562 aa21.77■■□□□ 1.08
TRIM46-205ENST00000392451 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
TRIM46-205ENST00000392451 CECR2Q9BXF3 1484 aa21.51■■□□□ 1.03
TRIM46-205ENST00000392451 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
TRIM46-205ENST00000392451 BAZ1AQ9NRL2 1556 aaPredicted RBP21.39■■□□□ 1.02
TRIM46-205ENST00000392451 WIZO95785 1651 aa21.39■■□□□ 1.01
TRIM46-205ENST00000392451 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
TRIM46-205ENST00000392451 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
TRIM46-205ENST00000392451 SLC24A1O60721 1099 aa21.2■□□□□ 0.98
TRIM46-205ENST00000392451 TOP2AP11388 1531 aaKnown RBP21.18■□□□□ 0.98
TRIM46-205ENST00000392451 PELP1Q8IZL8 1130 aaKnown RBP21.14■□□□□ 0.98
TRIM46-205ENST00000392451 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
TRIM46-205ENST00000392451 CCER1Q8TC90 406 aaPredicted RBP21.06■□□□□ 0.96
TRIM46-205ENST00000392451 PRKCSHP14314 528 aaPredicted RBP21.04■□□□□ 0.96
TRIM46-205ENST00000392451 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
TRIM46-205ENST00000392451 EEA1Q15075 1411 aa21.03■□□□□ 0.96
TRIM46-205ENST00000392451 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
TRIM46-205ENST00000392451 SMARCA2P51531 1590 aa21.01■□□□□ 0.95
TRIM46-205ENST00000392451 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
TRIM46-205ENST00000392451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.95■□□□□ 0.94
TRIM46-205ENST00000392451 TNIKQ9UKE5 1360 aa20.95■□□□□ 0.94
TRIM46-205ENST00000392451 CEP162Q5TB80 1403 aa20.95■□□□□ 0.94
TRIM46-205ENST00000392451 MYT1Q01538 1121 aa20.9■□□□□ 0.94
TRIM46-205ENST00000392451 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
TRIM46-205ENST00000392451 UNC13AQ9UPW8 1703 aa20.86■□□□□ 0.93
TRIM46-205ENST00000392451 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
TRIM46-205ENST00000392451 SOGA1O94964 1423 aa20.84■□□□□ 0.93
TRIM46-205ENST00000392451 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
TRIM46-205ENST00000392451 GOLGA3Q08378 1498 aa20.81■□□□□ 0.92
TRIM46-205ENST00000392451 CENPBP07199 599 aaPredicted RBP20.74■□□□□ 0.91
TRIM46-205ENST00000392451 DIEXFQ68CQ4 756 aaKnown RBP20.74■□□□□ 0.91
TRIM46-205ENST00000392451 ACIN1Q9UKV3 1341 aaKnown RBP20.71■□□□□ 0.91
TRIM46-205ENST00000392451 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
TRIM46-205ENST00000392451 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.9
TRIM46-205ENST00000392451 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
TRIM46-205ENST00000392451 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
TRIM46-205ENST00000392451 KIF21BO75037 1637 aa20.62■□□□□ 0.89
TRIM46-205ENST00000392451 BICRAQ9NZM4 1560 aa20.6■□□□□ 0.89
TRIM46-205ENST00000392451 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRIM46-205ENST00000392451 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
TRIM46-205ENST00000392451 CLIP1P30622 1438 aa20.55■□□□□ 0.88
TRIM46-205ENST00000392451 APLP2Q06481 763 aa20.55■□□□□ 0.88
TRIM46-205ENST00000392451 NEUROD1Q13562 356 aa20.55■□□□□ 0.88
TRIM46-205ENST00000392451 BAZ1BQ9UIG0 1483 aaKnown RBP20.55■□□□□ 0.88
TRIM46-205ENST00000392451 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
TRIM46-205ENST00000392451 VPS8Q8N3P4 1428 aa20.5■□□□□ 0.87
TRIM46-205ENST00000392451 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
TRIM46-205ENST00000392451 GTF3C3Q9Y5Q9 886 aa20.43■□□□□ 0.86
TRIM46-205ENST00000392451 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
TRIM46-205ENST00000392451 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
TRIM46-205ENST00000392451 TOP2BQ02880 1626 aa20.34■□□□□ 0.85
TRIM46-205ENST00000392451 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
TRIM46-205ENST00000392451 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
TRIM46-205ENST00000392451 BIVM-ERCC5R4GMW8 1640 aa20.26■□□□□ 0.83
TRIM46-205ENST00000392451 RANGAP1P46060 587 aaPredicted RBP20.19■□□□□ 0.82
TRIM46-205ENST00000392451 PRXQ9BXM0 1461 aa20.19■□□□□ 0.82
TRIM46-205ENST00000392451 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
TRIM46-205ENST00000392451 MIER1Q8N108 512 aa20.17■□□□□ 0.82
TRIM46-205ENST00000392451 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
TRIM46-205ENST00000392451 KIF27Q86VH2 1401 aa20.13■□□□□ 0.81
TRIM46-205ENST00000392451 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
TRIM46-205ENST00000392451 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
TRIM46-205ENST00000392451 ERICH6Q7L0X2 663 aa20.07■□□□□ 0.8
TRIM46-205ENST00000392451 DHX57Q6P158 1386 aaKnown RBP20.06■□□□□ 0.8
TRIM46-205ENST00000392451 RRBP1Q9P2E9 1410 aaKnown RBP20.03■□□□□ 0.8
TRIM46-205ENST00000392451 CUX1P39880 1505 aa20.03■□□□□ 0.8
TRIM46-205ENST00000392451 CFTRP13569 1480 aa19.98■□□□□ 0.79
TRIM46-205ENST00000392451 KANK4Q5T7N3 995 aaPredicted RBP19.97■□□□□ 0.79
TRIM46-205ENST00000392451 CUX2O14529 1486 aa19.96■□□□□ 0.79
TRIM46-205ENST00000392451 CCNB3Q8WWL7 1395 aa19.96■□□□□ 0.79
TRIM46-205ENST00000392451 ARHGAP35Q9NRY4 1499 aa19.91■□□□□ 0.78
TRIM46-205ENST00000392451 MAP3K1Q13233 1512 aa19.87■□□□□ 0.77
TRIM46-205ENST00000392451 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
TRIM46-205ENST00000392451 BCL11AQ9H165 835 aa19.84■□□□□ 0.77
TRIM46-205ENST00000392451 TIAM1Q13009 1591 aa19.79■□□□□ 0.76
TRIM46-205ENST00000392451 IGF1RP08069 1367 aa19.78■□□□□ 0.76
TRIM46-205ENST00000392451 ITGAEP38570 1179 aa19.77■□□□□ 0.76
TRIM46-205ENST00000392451 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
TRIM46-205ENST00000392451 CARMIL1Q5VZK9 1371 aa19.76■□□□□ 0.75
TRIM46-205ENST00000392451 RAB3GAP2Q9H2M9 1393 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms