RNA–Protein interactions for RNA: ENST00000392257.7

ALS2CR12-202, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALS2CR12, Length 1,943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-202ENST00000392257 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
ALS2CR12-202ENST00000392257 CHIC1Q5VXU3 224 aa15.36■□□□□ 0.05
ALS2CR12-202ENST00000392257 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
ALS2CR12-202ENST00000392257 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
ALS2CR12-202ENST00000392257 PHF23Q9BUL5 403 aaPredicted RBP13.82□□□□□ -0.2
ALS2CR12-202ENST00000392257 FOXD1Q16676 465 aa13.32□□□□□ -0.28
ALS2CR12-202ENST00000392257 MSH5O43196 834 aa13.03□□□□□ -0.32
ALS2CR12-202ENST00000392257 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
ALS2CR12-202ENST00000392257 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
ALS2CR12-202ENST00000392257 PPP6R1Q9UPN7 881 aa11.49□□□□□ -0.57
ALS2CR12-202ENST00000392257 ADRA2BP18089 450 aa11.41□□□□□ -0.58
ALS2CR12-202ENST00000392257 POTEHQ6S545 545 aa11.25□□□□□ -0.61
ALS2CR12-202ENST00000392257 DMRT2Q9Y5R5 561 aa11.06□□□□□ -0.64
ALS2CR12-202ENST00000392257 PLPPR3Q6T4P5 718 aa11.03□□□□□ -0.64
ALS2CR12-202ENST00000392257 RNF39Q9H2S5 420 aa10.94□□□□□ -0.66
ALS2CR12-202ENST00000392257 MAPK8IP2Q13387 824 aaPredicted RBP10.82□□□□□ -0.68
ALS2CR12-202ENST00000392257 SLC24A1O60721 1099 aa10.82□□□□□ -0.68
ALS2CR12-202ENST00000392257 C1QBPQ07021 282 aaKnown RBP10.76□□□□□ -0.69
ALS2CR12-202ENST00000392257 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
ALS2CR12-202ENST00000392257 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
ALS2CR12-202ENST00000392257 EHMT2Q96KQ7 1210 aa10.23□□□□□ -0.77
ALS2CR12-202ENST00000392257 HOXD11P31277 338 aaPredicted RBP10.19□□□□□ -0.78
ALS2CR12-202ENST00000392257 DNAJC5BQ9UF47 199 aa10.14□□□□□ -0.79
ALS2CR12-202ENST00000392257 KCNA4P22459 653 aa10.01□□□□□ -0.81
ALS2CR12-202ENST00000392257 SP7Q8TDD2 431 aaPredicted RBP10□□□□□ -0.81
ALS2CR12-202ENST00000392257 DSG3P32926 999 aa9.84□□□□□ -0.83
ALS2CR12-202ENST00000392257 RNF216Q9NWF9 866 aaPredicted RBP9.82□□□□□ -0.84
ALS2CR12-202ENST00000392257 DAXXQ9UER7 740 aaPredicted RBP9.82□□□□□ -0.84
ALS2CR12-202ENST00000392257 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
ALS2CR12-202ENST00000392257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.74□□□□□ -0.85
ALS2CR12-202ENST00000392257 CSRNP3Q8WYN3 585 aa9.73□□□□□ -0.85
ALS2CR12-202ENST00000392257 RTN4Q9NQC3 1192 aaKnown RBP9.72□□□□□ -0.85
ALS2CR12-202ENST00000392257 CHRDL2Q6WN34 429 aa9.7□□□□□ -0.86
ALS2CR12-202ENST00000392257 NCBP3Q53F19 620 aaKnown RBP9.68□□□□□ -0.86
ALS2CR12-202ENST00000392257 SLC4A1APQ9BWU0 796 aaKnown RBP9.66□□□□□ -0.86
ALS2CR12-202ENST00000392257 CAPN15O75808 1086 aa9.65□□□□□ -0.86
ALS2CR12-202ENST00000392257 CNKSR2Q8WXI2 1034 aa9.61□□□□□ -0.87
ALS2CR12-202ENST00000392257 AMER1Q5JTC6 1135 aaPredicted RBP9.58□□□□□ -0.88
ALS2CR12-202ENST00000392257 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
ALS2CR12-202ENST00000392257 RBM42Q9BTD8 480 aaKnown RBP9.52□□□□□ -0.89
ALS2CR12-202ENST00000392257 PPP4R3CPQ6ZMV5 832 aa9.48□□□□□ -0.89
ALS2CR12-202ENST00000392257 TTBK1Q5TCY1 1321 aaPredicted RBP9.42□□□□□ -0.9
ALS2CR12-202ENST00000392257 HAX1O00165 279 aa9.39□□□□□ -0.91
ALS2CR12-202ENST00000392257 LHX8Q68G74 356 aa9.37□□□□□ -0.91
ALS2CR12-202ENST00000392257 U3KPZ7 1027 aaPredicted RBP9.35□□□□□ -0.91
ALS2CR12-202ENST00000392257 MYT1Q01538 1121 aa9.34□□□□□ -0.91
ALS2CR12-202ENST00000392257 ARXQ96QS3 562 aa9.3□□□□□ -0.92
ALS2CR12-202ENST00000392257 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
ALS2CR12-202ENST00000392257 APLP2Q06481 763 aa9.29□□□□□ -0.92
ALS2CR12-202ENST00000392257 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
ALS2CR12-202ENST00000392257 ABCB7O75027 752 aa9.27□□□□□ -0.93
ALS2CR12-202ENST00000392257 NPM3O75607 178 aaKnown RBP9.24□□□□□ -0.93
ALS2CR12-202ENST00000392257 ZBTB22O15209 634 aa9.22□□□□□ -0.93
ALS2CR12-202ENST00000392257 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
ALS2CR12-202ENST00000392257 PIP4P2Q8N4L2 257 aa9.19□□□□□ -0.94
ALS2CR12-202ENST00000392257 ERICH6Q7L0X2 663 aa9.19□□□□□ -0.94
ALS2CR12-202ENST00000392257 ZNF219Q9P2Y4 722 aaPredicted RBP9.19□□□□□ -0.94
ALS2CR12-202ENST00000392257 TIMELESSQ9UNS1 1208 aa9.13□□□□□ -0.95
ALS2CR12-202ENST00000392257 EVX2Q03828 476 aa9.07□□□□□ -0.96
ALS2CR12-202ENST00000392257 TAOK2Q9UL54 1235 aa9.05□□□□□ -0.96
ALS2CR12-202ENST00000392257 RANGAP1P46060 587 aaPredicted RBP9.01□□□□□ -0.97
ALS2CR12-202ENST00000392257 AKT1S1Q96B36 256 aa9.01□□□□□ -0.97
ALS2CR12-202ENST00000392257 TULP1O00294 542 aaPredicted RBP9□□□□□ -0.97
ALS2CR12-202ENST00000392257 FOXD4L1Q9NU39 408 aa8.99□□□□□ -0.97
ALS2CR12-202ENST00000392257 HOMEZQ8IX15 550 aa8.99□□□□□ -0.97
ALS2CR12-202ENST00000392257 BCANQ96GW7 911 aa8.97□□□□□ -0.97
ALS2CR12-202ENST00000392257 FXR2P51116 673 aaKnown RBP eCLIP8.96□□□□□ -0.97
ALS2CR12-202ENST00000392257 POTEMA6NI47 508 aa8.89□□□□□ -0.99
ALS2CR12-202ENST00000392257 PCDH10Q9P2E7 1040 aa8.89□□□□□ -0.99
ALS2CR12-202ENST00000392257 GABBR2O75899 941 aa8.88□□□□□ -0.99
ALS2CR12-202ENST00000392257 REM2Q8IYK8 340 aaPredicted RBP8.88□□□□□ -0.99
ALS2CR12-202ENST00000392257 TPRNQ4KMQ1 711 aa8.88□□□□□ -0.99
ALS2CR12-202ENST00000392257 POTEGQ6S5H5 508 aa8.81□□□□□ -1
ALS2CR12-202ENST00000392257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.79□□□□□ -1
ALS2CR12-202ENST00000392257 PITPNM1O00562 1244 aa8.79□□□□□ -1
ALS2CR12-202ENST00000392257 PLCB2Q00722 1185 aa8.79□□□□□ -1
ALS2CR12-202ENST00000392257 HNRNPUL2Q1KMD3 747 aaKnown RBP8.79□□□□□ -1
ALS2CR12-202ENST00000392257 NISCHQ9Y2I1 1504 aa8.79□□□□□ -1
ALS2CR12-202ENST00000392257 FKBP8Q14318 412 aa8.78□□□□□ -1
ALS2CR12-202ENST00000392257 KLHL34Q8N239 644 aa8.77□□□□□ -1.01
ALS2CR12-202ENST00000392257 PODXL2Q9NZ53 605 aa8.76□□□□□ -1.01
ALS2CR12-202ENST00000392257 GTF3C3Q9Y5Q9 886 aa8.76□□□□□ -1.01
ALS2CR12-202ENST00000392257 C19orf67A6NJJ6 358 aa8.73□□□□□ -1.01
ALS2CR12-202ENST00000392257 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
ALS2CR12-202ENST00000392257 HAP1P54257 671 aaPredicted RBP8.68□□□□□ -1.02
ALS2CR12-202ENST00000392257 POLA2Q14181 598 aa8.66□□□□□ -1.02
ALS2CR12-202ENST00000392257 SAMD1Q6SPF0 538 aaPredicted RBP8.65□□□□□ -1.02
ALS2CR12-202ENST00000392257 POTEIP0CG38 1075 aa8.64□□□□□ -1.03
ALS2CR12-202ENST00000392257 ATXN8OSP0DMR3 200 aa8.58□□□□□ -1.04
ALS2CR12-202ENST00000392257 NPM2Q86SE8 214 aaKnown RBP8.58□□□□□ -1.04
ALS2CR12-202ENST00000392257 PRKAR2AP13861 404 aaKnown RBP8.57□□□□□ -1.04
ALS2CR12-202ENST00000392257 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
ALS2CR12-202ENST00000392257 OTUD5Q96G74 571 aa8.56□□□□□ -1.04
ALS2CR12-202ENST00000392257 SLC4A2P04920 1241 aa8.54□□□□□ -1.04
ALS2CR12-202ENST00000392257 VSIG10Q8N0Z9 540 aa8.53□□□□□ -1.04
ALS2CR12-202ENST00000392257 MYCNP04198 464 aaPredicted RBP8.52□□□□□ -1.05
ALS2CR12-202ENST00000392257 FBXO3Q9UK99 471 aa8.51□□□□□ -1.05
ALS2CR12-202ENST00000392257 ZBTB12Q9Y330 459 aaPredicted RBP8.5□□□□□ -1.05
ALS2CR12-202ENST00000392257 C14orf37Q86TY3 774 aa8.49□□□□□ -1.05
ALS2CR12-202ENST00000392257 CLCN6P51797 869 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 210.5 ms