RNA–Protein interactions for RNA: ENST00000391307.1

RNU1-139P-201, Transcript of RNA, U1 small nuclear 139, pseudogene, humanhuman

BASIC

Gene RNU1-139P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-139P-201ENST00000391307 AEBP2Q6ZN18 517 aaPredicted RBP14.23□□□□□ -0.13
RNU1-139P-201ENST00000391307 CHIC1Q5VXU3 224 aa13.71□□□□□ -0.21
RNU1-139P-201ENST00000391307 PHF23Q9BUL5 403 aaPredicted RBP12.09□□□□□ -0.47
RNU1-139P-201ENST00000391307 SENP3Q9H4L4 574 aaPredicted RBP12.01□□□□□ -0.49
RNU1-139P-201ENST00000391307 FOXD1Q16676 465 aa11.22□□□□□ -0.61
RNU1-139P-201ENST00000391307 PLPPR3Q6T4P5 718 aa11.06□□□□□ -0.64
RNU1-139P-201ENST00000391307 PPP6R1Q9UPN7 881 aa10.73□□□□□ -0.69
RNU1-139P-201ENST00000391307 ADRA2BP18089 450 aa10.72□□□□□ -0.69
RNU1-139P-201ENST00000391307 PIAS4Q8N2W9 510 aaPredicted RBP10.56□□□□□ -0.72
RNU1-139P-201ENST00000391307 MSH5O43196 834 aa10.33□□□□□ -0.76
RNU1-139P-201ENST00000391307 MAPK8IP2Q13387 824 aaPredicted RBP9.78□□□□□ -0.84
RNU1-139P-201ENST00000391307 PPP4R3CPQ6ZMV5 832 aa9.77□□□□□ -0.85
RNU1-139P-201ENST00000391307 SCAF1Q9H7N4 1312 aaKnown RBP9.69□□□□□ -0.86
RNU1-139P-201ENST00000391307 POTEDQ86YR6 584 aa9.68□□□□□ -0.86
RNU1-139P-201ENST00000391307 DMRT2Q9Y5R5 561 aa9.58□□□□□ -0.88
RNU1-139P-201ENST00000391307 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
RNU1-139P-201ENST00000391307 KCNA4P22459 653 aa9.45□□□□□ -0.9
RNU1-139P-201ENST00000391307 NCBP3Q53F19 620 aaKnown RBP9.41□□□□□ -0.9
RNU1-139P-201ENST00000391307 NPM3O75607 178 aaKnown RBP9.35□□□□□ -0.91
RNU1-139P-201ENST00000391307 RNF216Q9NWF9 866 aaPredicted RBP9.33□□□□□ -0.92
RNU1-139P-201ENST00000391307 HOXD11P31277 338 aaPredicted RBP9.32□□□□□ -0.92
RNU1-139P-201ENST00000391307 DCAF8L1A6NGE4 600 aa9.25□□□□□ -0.93
RNU1-139P-201ENST00000391307 DNAJC5BQ9UF47 199 aa8.96□□□□□ -0.98
RNU1-139P-201ENST00000391307 SLC4A1APQ9BWU0 796 aaKnown RBP8.94□□□□□ -0.98
RNU1-139P-201ENST00000391307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.92□□□□□ -0.98
RNU1-139P-201ENST00000391307 SLC4A2P04920 1241 aa8.87□□□□□ -0.99
RNU1-139P-201ENST00000391307 RNF39Q9H2S5 420 aa8.87□□□□□ -0.99
RNU1-139P-201ENST00000391307 U3KPZ7 1027 aaPredicted RBP8.78□□□□□ -1
RNU1-139P-201ENST00000391307 CACNB1Q02641 598 aaPredicted RBP8.75□□□□□ -1.01
RNU1-139P-201ENST00000391307 ZBTB22O15209 634 aa8.71□□□□□ -1.02
RNU1-139P-201ENST00000391307 C1QBPQ07021 282 aaKnown RBP8.71□□□□□ -1.02
RNU1-139P-201ENST00000391307 FOXD4L1Q9NU39 408 aa8.67□□□□□ -1.02
RNU1-139P-201ENST00000391307 EHMT2Q96KQ7 1210 aa8.63□□□□□ -1.03
RNU1-139P-201ENST00000391307 MYCNP04198 464 aaPredicted RBP8.6□□□□□ -1.03
RNU1-139P-201ENST00000391307 SPINK5Q9NQ38 1064 aaPredicted RBP8.6□□□□□ -1.03
RNU1-139P-201ENST00000391307 CAPN15O75808 1086 aa8.55□□□□□ -1.04
RNU1-139P-201ENST00000391307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.53□□□□□ -1.04
RNU1-139P-201ENST00000391307 HNRNPUL2Q1KMD3 747 aaKnown RBP8.53□□□□□ -1.04
RNU1-139P-201ENST00000391307 SAMD1Q6SPF0 538 aaPredicted RBP8.52□□□□□ -1.05
RNU1-139P-201ENST00000391307 CSRNP3Q8WYN3 585 aa8.52□□□□□ -1.05
RNU1-139P-201ENST00000391307 TRHP20396 242 aaPredicted RBP8.5□□□□□ -1.05
RNU1-139P-201ENST00000391307 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
RNU1-139P-201ENST00000391307 APLP2Q06481 763 aa8.45□□□□□ -1.06
RNU1-139P-201ENST00000391307 ABCB7O75027 752 aa8.42□□□□□ -1.06
RNU1-139P-201ENST00000391307 DSG3P32926 999 aa8.41□□□□□ -1.06
RNU1-139P-201ENST00000391307 ZNF219Q9P2Y4 722 aaPredicted RBP8.41□□□□□ -1.06
RNU1-139P-201ENST00000391307 ATXN8OSP0DMR3 200 aa8.31□□□□□ -1.08
RNU1-139P-201ENST00000391307 POLA2Q14181 598 aa8.31□□□□□ -1.08
RNU1-139P-201ENST00000391307 MKRN4PQ13434 485 aaPredicted RBP8.07□□□□□ -1.12
RNU1-139P-201ENST00000391307 ZBTB12Q9Y330 459 aaPredicted RBP8.07□□□□□ -1.12
RNU1-139P-201ENST00000391307 OSCARQ8IYS5 282 aa8.06□□□□□ -1.12
RNU1-139P-201ENST00000391307 FBLN2P98095 1184 aa8.03□□□□□ -1.12
RNU1-139P-201ENST00000391307 RBM42Q9BTD8 480 aaKnown RBP7.96□□□□□ -1.14
RNU1-139P-201ENST00000391307 SPDYE2BA6NHP3 402 aa7.87□□□□□ -1.15
RNU1-139P-201ENST00000391307 SPDYE6P0CI01 402 aa7.87□□□□□ -1.15
RNU1-139P-201ENST00000391307 SPDYE2Q495Y8 402 aa7.87□□□□□ -1.15
RNU1-139P-201ENST00000391307 ZNF692Q9BU19 519 aaPredicted RBP7.86□□□□□ -1.15
RNU1-139P-201ENST00000391307 AKT1S1Q96B36 256 aa7.84□□□□□ -1.15
RNU1-139P-201ENST00000391307 REM2Q8IYK8 340 aaPredicted RBP7.82□□□□□ -1.16
RNU1-139P-201ENST00000391307 SSUH2Q9Y2M2 353 aa7.82□□□□□ -1.16
RNU1-139P-201ENST00000391307 SPDYE4A6NLX3 237 aa7.8□□□□□ -1.16
RNU1-139P-201ENST00000391307 PABPN1Q86U42 306 aaKnown RBP eCLIP7.78□□□□□ -1.16
RNU1-139P-201ENST00000391307 PITPNM1O00562 1244 aa7.75□□□□□ -1.17
RNU1-139P-201ENST00000391307 FKBP8Q14318 412 aa7.73□□□□□ -1.17
RNU1-139P-201ENST00000391307 CHRDL2Q6WN34 429 aa7.73□□□□□ -1.17
RNU1-139P-201ENST00000391307 CLEC11AQ9Y240 323 aa7.72□□□□□ -1.17
RNU1-139P-201ENST00000391307 SPDYE1Q8NFV5 336 aaPredicted RBP7.68□□□□□ -1.18
RNU1-139P-201ENST00000391307 POTEHQ6S545 545 aa7.64□□□□□ -1.19
RNU1-139P-201ENST00000391307 PIP4P2Q8N4L2 257 aa7.62□□□□□ -1.19
RNU1-139P-201ENST00000391307 PROM2Q8N271 834 aa7.61□□□□□ -1.19
RNU1-139P-201ENST00000391307 PRR29P0C7W0 189 aa7.59□□□□□ -1.19
RNU1-139P-201ENST00000391307 FXR2P51116 673 aaKnown RBP eCLIP7.58□□□□□ -1.2
RNU1-139P-201ENST00000391307 CHADLQ6NUI6 762 aa7.57□□□□□ -1.2
RNU1-139P-201ENST00000391307 PRKAR2AP13861 404 aaKnown RBP7.55□□□□□ -1.2
RNU1-139P-201ENST00000391307 STAG3Q9UJ98 1225 aa7.52□□□□□ -1.21
RNU1-139P-201ENST00000391307 CREBZFQ9NS37 354 aa7.48□□□□□ -1.21
RNU1-139P-201ENST00000391307 FARP1Q9Y4F1 1045 aaPredicted RBP7.42□□□□□ -1.22
RNU1-139P-201ENST00000391307 HAX1O00165 279 aa7.41□□□□□ -1.22
RNU1-139P-201ENST00000391307 MIER1Q8N108 512 aa7.41□□□□□ -1.22
RNU1-139P-201ENST00000391307 PLCD3Q8N3E9 789 aa7.39□□□□□ -1.23
RNU1-139P-201ENST00000391307 FBXO3Q9UK99 471 aa7.39□□□□□ -1.23
RNU1-139P-201ENST00000391307 MNX1P50219 401 aaPredicted RBP7.38□□□□□ -1.23
RNU1-139P-201ENST00000391307 EVX2Q03828 476 aa7.38□□□□□ -1.23
RNU1-139P-201ENST00000391307 VASPP50552 380 aaPredicted RBP7.36□□□□□ -1.23
RNU1-139P-201ENST00000391307 C19orf67A6NJJ6 358 aa7.34□□□□□ -1.23
RNU1-139P-201ENST00000391307 PLEKHG5O94827 1062 aa7.32□□□□□ -1.24
RNU1-139P-201ENST00000391307 CD44P16070 742 aaKnown RBP7.32□□□□□ -1.24
RNU1-139P-201ENST00000391307 NPM1P06748 294 aaKnown RBP eCLIP7.3□□□□□ -1.24
RNU1-139P-201ENST00000391307 IFNLR1Q8IU57 520 aaPredicted RBP7.27□□□□□ -1.25
RNU1-139P-201ENST00000391307 KLHL34Q8N239 644 aa7.27□□□□□ -1.25
RNU1-139P-201ENST00000391307 SP7Q8TDD2 431 aaPredicted RBP7.27□□□□□ -1.25
RNU1-139P-201ENST00000391307 ZRANB1Q9UGI0 708 aa7.27□□□□□ -1.25
RNU1-139P-201ENST00000391307 RASEFQ8IZ41 740 aa7.26□□□□□ -1.25
RNU1-139P-201ENST00000391307 TSPYL2Q9H2G4 693 aaPredicted RBP7.26□□□□□ -1.25
RNU1-139P-201ENST00000391307 ZBTB47Q9UFB7 747 aaPredicted RBP7.24□□□□□ -1.25
RNU1-139P-201ENST00000391307 NUBP1P53384 320 aa7.23□□□□□ -1.25
RNU1-139P-201ENST00000391307 PHF12Q96QT6 1004 aa7.23□□□□□ -1.25
RNU1-139P-201ENST00000391307 PAK3O75914 559 aaPredicted RBP7.22□□□□□ -1.25
RNU1-139P-201ENST00000391307 GABBR2O75899 941 aa7.19□□□□□ -1.26
RNU1-139P-201ENST00000391307 ZNF579Q8NAF0 562 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms