RNA–Protein interactions for RNA: ENST00000391046.1

RNU6-1300P-201, Transcript of RNA, U6 small nuclear 1300, pseudogene, humanhuman

BASIC

Gene RNU6-1300P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1300P-201ENST00000391046 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
RNU6-1300P-201ENST00000391046 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
RNU6-1300P-201ENST00000391046 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
RNU6-1300P-201ENST00000391046 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
RNU6-1300P-201ENST00000391046 PLPPR3Q6T4P5 718 aa15.24■□□□□ 0.03
RNU6-1300P-201ENST00000391046 FOXD1Q16676 465 aa14.54□□□□□ -0.08
RNU6-1300P-201ENST00000391046 ADRA2BP18089 450 aa14.32□□□□□ -0.12
RNU6-1300P-201ENST00000391046 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
RNU6-1300P-201ENST00000391046 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
RNU6-1300P-201ENST00000391046 KCNA4P22459 653 aa13.62□□□□□ -0.23
RNU6-1300P-201ENST00000391046 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
RNU6-1300P-201ENST00000391046 MSH5O43196 834 aa13.24□□□□□ -0.29
RNU6-1300P-201ENST00000391046 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
RNU6-1300P-201ENST00000391046 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
RNU6-1300P-201ENST00000391046 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
RNU6-1300P-201ENST00000391046 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
RNU6-1300P-201ENST00000391046 SLC4A1APQ9BWU0 796 aaKnown RBP13.03□□□□□ -0.32
RNU6-1300P-201ENST00000391046 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
RNU6-1300P-201ENST00000391046 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
RNU6-1300P-201ENST00000391046 CSRNP3Q8WYN3 585 aa12.81□□□□□ -0.36
RNU6-1300P-201ENST00000391046 RNF216Q9NWF9 866 aaPredicted RBP12.67□□□□□ -0.38
RNU6-1300P-201ENST00000391046 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
RNU6-1300P-201ENST00000391046 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
RNU6-1300P-201ENST00000391046 ZBTB22O15209 634 aa12.54□□□□□ -0.4
RNU6-1300P-201ENST00000391046 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
RNU6-1300P-201ENST00000391046 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
RNU6-1300P-201ENST00000391046 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
RNU6-1300P-201ENST00000391046 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
RNU6-1300P-201ENST00000391046 POTEDQ86YR6 584 aa12.02□□□□□ -0.49
RNU6-1300P-201ENST00000391046 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
RNU6-1300P-201ENST00000391046 ATXN8OSP0DMR3 200 aa11.96□□□□□ -0.49
RNU6-1300P-201ENST00000391046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
RNU6-1300P-201ENST00000391046 U3KPZ7 1027 aaPredicted RBP11.77□□□□□ -0.53
RNU6-1300P-201ENST00000391046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
RNU6-1300P-201ENST00000391046 HNRNPUL2Q1KMD3 747 aaKnown RBP11.75□□□□□ -0.53
RNU6-1300P-201ENST00000391046 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
RNU6-1300P-201ENST00000391046 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
RNU6-1300P-201ENST00000391046 FKBP8Q14318 412 aa11.53□□□□□ -0.56
RNU6-1300P-201ENST00000391046 APLP2Q06481 763 aa11.52□□□□□ -0.57
RNU6-1300P-201ENST00000391046 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
RNU6-1300P-201ENST00000391046 RNF39Q9H2S5 420 aa11.4□□□□□ -0.58
RNU6-1300P-201ENST00000391046 SPINK5Q9NQ38 1064 aaPredicted RBP11.32□□□□□ -0.6
RNU6-1300P-201ENST00000391046 TRHP20396 242 aaPredicted RBP11.29□□□□□ -0.6
RNU6-1300P-201ENST00000391046 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
RNU6-1300P-201ENST00000391046 CAPN15O75808 1086 aa11.24□□□□□ -0.61
RNU6-1300P-201ENST00000391046 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
RNU6-1300P-201ENST00000391046 POLA2Q14181 598 aa11.21□□□□□ -0.61
RNU6-1300P-201ENST00000391046 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
RNU6-1300P-201ENST00000391046 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
RNU6-1300P-201ENST00000391046 FBLN2P98095 1184 aa11.16□□□□□ -0.62
RNU6-1300P-201ENST00000391046 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
RNU6-1300P-201ENST00000391046 ABCB7O75027 752 aa11.06□□□□□ -0.64
RNU6-1300P-201ENST00000391046 ZBTB12Q9Y330 459 aaPredicted RBP11.04□□□□□ -0.64
RNU6-1300P-201ENST00000391046 PROM2Q8N271 834 aa11.03□□□□□ -0.64
RNU6-1300P-201ENST00000391046 FBXO3Q9UK99 471 aa11.02□□□□□ -0.65
RNU6-1300P-201ENST00000391046 DSG3P32926 999 aa10.99□□□□□ -0.65
RNU6-1300P-201ENST00000391046 VASPP50552 380 aaPredicted RBP10.86□□□□□ -0.67
RNU6-1300P-201ENST00000391046 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
RNU6-1300P-201ENST00000391046 CACNB1Q02641 598 aaPredicted RBP10.8□□□□□ -0.68
RNU6-1300P-201ENST00000391046 SPDYE2BA6NHP3 402 aa10.79□□□□□ -0.68
RNU6-1300P-201ENST00000391046 SPDYE6P0CI01 402 aa10.79□□□□□ -0.68
RNU6-1300P-201ENST00000391046 SPDYE2Q495Y8 402 aa10.79□□□□□ -0.68
RNU6-1300P-201ENST00000391046 OSCARQ8IYS5 282 aa10.79□□□□□ -0.68
RNU6-1300P-201ENST00000391046 IFNLR1Q8IU57 520 aaPredicted RBP10.75□□□□□ -0.69
RNU6-1300P-201ENST00000391046 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
RNU6-1300P-201ENST00000391046 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
RNU6-1300P-201ENST00000391046 PABPN1Q86U42 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
RNU6-1300P-201ENST00000391046 STAG3Q9UJ98 1225 aa10.67□□□□□ -0.7
RNU6-1300P-201ENST00000391046 KLHL34Q8N239 644 aa10.57□□□□□ -0.72
RNU6-1300P-201ENST00000391046 PKD2Q13563 968 aa10.55□□□□□ -0.72
RNU6-1300P-201ENST00000391046 PLCD3Q8N3E9 789 aa10.55□□□□□ -0.72
RNU6-1300P-201ENST00000391046 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
RNU6-1300P-201ENST00000391046 MIER1Q8N108 512 aa10.53□□□□□ -0.72
RNU6-1300P-201ENST00000391046 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
RNU6-1300P-201ENST00000391046 PLEKHG5O94827 1062 aa10.42□□□□□ -0.74
RNU6-1300P-201ENST00000391046 DCAF8L2P0C7V8 631 aa10.42□□□□□ -0.74
RNU6-1300P-201ENST00000391046 AKT1S1Q96B36 256 aa10.41□□□□□ -0.74
RNU6-1300P-201ENST00000391046 ZBTB47Q9UFB7 747 aaPredicted RBP10.41□□□□□ -0.74
RNU6-1300P-201ENST00000391046 ECM2O94769 699 aaPredicted RBP10.39□□□□□ -0.75
RNU6-1300P-201ENST00000391046 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
RNU6-1300P-201ENST00000391046 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
RNU6-1300P-201ENST00000391046 REM2Q8IYK8 340 aaPredicted RBP10.31□□□□□ -0.76
RNU6-1300P-201ENST00000391046 CIZ1Q9ULV3 898 aaPredicted RBP10.3□□□□□ -0.76
RNU6-1300P-201ENST00000391046 CLEC11AQ9Y240 323 aa10.3□□□□□ -0.76
RNU6-1300P-201ENST00000391046 RGL2O15211 777 aa10.29□□□□□ -0.76
RNU6-1300P-201ENST00000391046 PRR29P0C7W0 189 aa10.27□□□□□ -0.77
RNU6-1300P-201ENST00000391046 NPM1P06748 294 aaKnown RBP eCLIP10.24□□□□□ -0.77
RNU6-1300P-201ENST00000391046 CREBZFQ9NS37 354 aa10.24□□□□□ -0.77
RNU6-1300P-201ENST00000391046 NUBP1P53384 320 aa10.23□□□□□ -0.77
RNU6-1300P-201ENST00000391046 TRIM41Q8WV44 630 aa10.23□□□□□ -0.77
RNU6-1300P-201ENST00000391046 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
RNU6-1300P-201ENST00000391046 GSE1Q14687 1217 aa10.21□□□□□ -0.77
RNU6-1300P-201ENST00000391046 MNX1P50219 401 aaPredicted RBP10.19□□□□□ -0.78
RNU6-1300P-201ENST00000391046 HAP1P54257 671 aaPredicted RBP10.19□□□□□ -0.78
RNU6-1300P-201ENST00000391046 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
RNU6-1300P-201ENST00000391046 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
RNU6-1300P-201ENST00000391046 DCAF8Q5TAQ9 597 aa10.16□□□□□ -0.78
RNU6-1300P-201ENST00000391046 CHGAP10645 457 aaKnown RBP10.12□□□□□ -0.79
RNU6-1300P-201ENST00000391046 PAXIP1Q6ZW49 1069 aaPredicted RBP10.11□□□□□ -0.79
RNU6-1300P-201ENST00000391046 FAM212AQ96EL1 285 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms