RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 AEBP2Q6ZN18 517 aaPredicted RBP8.31□□□□□ -1.08
SNORD28B-201ENST00000390993 CHIC1Q5VXU3 224 aa8.08□□□□□ -1.12
SNORD28B-201ENST00000390993 SENP3Q9H4L4 574 aaPredicted RBP7.22□□□□□ -1.25
SNORD28B-201ENST00000390993 PHF23Q9BUL5 403 aaPredicted RBP7.09□□□□□ -1.27
SNORD28B-201ENST00000390993 FOXD1Q16676 465 aa6.61□□□□□ -1.35
SNORD28B-201ENST00000390993 PLPPR3Q6T4P5 718 aa6.56□□□□□ -1.36
SNORD28B-201ENST00000390993 PIAS4Q8N2W9 510 aaPredicted RBP6.28□□□□□ -1.4
SNORD28B-201ENST00000390993 MSH5O43196 834 aa6.27□□□□□ -1.41
SNORD28B-201ENST00000390993 ADRA2BP18089 450 aa6.25□□□□□ -1.41
SNORD28B-201ENST00000390993 PPP6R1Q9UPN7 881 aa6.22□□□□□ -1.41
SNORD28B-201ENST00000390993 SCAF1Q9H7N4 1312 aaKnown RBP5.88□□□□□ -1.47
SNORD28B-201ENST00000390993 POTEDQ86YR6 584 aa5.84□□□□□ -1.47
SNORD28B-201ENST00000390993 PPP4R3CPQ6ZMV5 832 aa5.72□□□□□ -1.49
SNORD28B-201ENST00000390993 DMRT2Q9Y5R5 561 aa5.69□□□□□ -1.5
SNORD28B-201ENST00000390993 MAPK8IP2Q13387 824 aaPredicted RBP5.68□□□□□ -1.5
SNORD28B-201ENST00000390993 NCBP3Q53F19 620 aaKnown RBP5.64□□□□□ -1.51
SNORD28B-201ENST00000390993 CNKSR2Q8WXI2 1034 aa5.63□□□□□ -1.51
SNORD28B-201ENST00000390993 RNF216Q9NWF9 866 aaPredicted RBP5.54□□□□□ -1.52
SNORD28B-201ENST00000390993 DCAF8L1A6NGE4 600 aa5.53□□□□□ -1.52
SNORD28B-201ENST00000390993 HOXD11P31277 338 aaPredicted RBP5.51□□□□□ -1.53
SNORD28B-201ENST00000390993 NPM3O75607 178 aaKnown RBP5.42□□□□□ -1.54
SNORD28B-201ENST00000390993 KCNA4P22459 653 aa5.4□□□□□ -1.54
SNORD28B-201ENST00000390993 DNAJC5BQ9UF47 199 aa5.36□□□□□ -1.55
SNORD28B-201ENST00000390993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.34□□□□□ -1.55
SNORD28B-201ENST00000390993 CACNB1Q02641 598 aaPredicted RBP5.31□□□□□ -1.56
SNORD28B-201ENST00000390993 RNF39Q9H2S5 420 aa5.28□□□□□ -1.56
SNORD28B-201ENST00000390993 C1QBPQ07021 282 aaKnown RBP5.27□□□□□ -1.57
SNORD28B-201ENST00000390993 APLP2Q06481 763 aa5.21□□□□□ -1.58
SNORD28B-201ENST00000390993 SLC4A1APQ9BWU0 796 aaKnown RBP5.2□□□□□ -1.58
SNORD28B-201ENST00000390993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.19□□□□□ -1.58
SNORD28B-201ENST00000390993 HNRNPUL2Q1KMD3 747 aaKnown RBP5.19□□□□□ -1.58
SNORD28B-201ENST00000390993 U3KPZ7 1027 aaPredicted RBP5.14□□□□□ -1.59
SNORD28B-201ENST00000390993 SAMD1Q6SPF0 538 aaPredicted RBP5.13□□□□□ -1.59
SNORD28B-201ENST00000390993 CAPN15O75808 1086 aa5.11□□□□□ -1.59
SNORD28B-201ENST00000390993 SLC4A2P04920 1241 aa5.11□□□□□ -1.59
SNORD28B-201ENST00000390993 MYCNP04198 464 aaPredicted RBP5.09□□□□□ -1.59
SNORD28B-201ENST00000390993 FOXD4L1Q9NU39 408 aa5.08□□□□□ -1.6
SNORD28B-201ENST00000390993 ZNF219Q9P2Y4 722 aaPredicted RBP5.08□□□□□ -1.6
SNORD28B-201ENST00000390993 TRHP20396 242 aaPredicted RBP5.04□□□□□ -1.6
SNORD28B-201ENST00000390993 SPINK5Q9NQ38 1064 aaPredicted RBP5.02□□□□□ -1.61
SNORD28B-201ENST00000390993 DSG3P32926 999 aa4.98□□□□□ -1.61
SNORD28B-201ENST00000390993 ABCB7O75027 752 aa4.94□□□□□ -1.62
SNORD28B-201ENST00000390993 ATXN8OSP0DMR3 200 aa4.93□□□□□ -1.62
SNORD28B-201ENST00000390993 ZBTB12Q9Y330 459 aaPredicted RBP4.91□□□□□ -1.62
SNORD28B-201ENST00000390993 ZBTB22O15209 634 aa4.9□□□□□ -1.63
SNORD28B-201ENST00000390993 POLA2Q14181 598 aa4.89□□□□□ -1.63
SNORD28B-201ENST00000390993 EHMT2Q96KQ7 1210 aa4.87□□□□□ -1.63
SNORD28B-201ENST00000390993 RBM42Q9BTD8 480 aaKnown RBP4.87□□□□□ -1.63
SNORD28B-201ENST00000390993 FBLN2P98095 1184 aa4.83□□□□□ -1.64
SNORD28B-201ENST00000390993 ATF5Q9Y2D1 282 aaPredicted RBP4.83□□□□□ -1.64
SNORD28B-201ENST00000390993 CSRNP3Q8WYN3 585 aa4.82□□□□□ -1.64
SNORD28B-201ENST00000390993 OSCARQ8IYS5 282 aa4.73□□□□□ -1.65
SNORD28B-201ENST00000390993 AKT1S1Q96B36 256 aa4.73□□□□□ -1.65
SNORD28B-201ENST00000390993 SPDYE2BA6NHP3 402 aa4.71□□□□□ -1.66
SNORD28B-201ENST00000390993 SPDYE6P0CI01 402 aa4.71□□□□□ -1.66
SNORD28B-201ENST00000390993 SPDYE2Q495Y8 402 aa4.71□□□□□ -1.66
SNORD28B-201ENST00000390993 ZNF692Q9BU19 519 aaPredicted RBP4.67□□□□□ -1.66
SNORD28B-201ENST00000390993 POTEHQ6S545 545 aa4.64□□□□□ -1.67
SNORD28B-201ENST00000390993 CHRDL2Q6WN34 429 aa4.64□□□□□ -1.67
SNORD28B-201ENST00000390993 REM2Q8IYK8 340 aaPredicted RBP4.64□□□□□ -1.67
SNORD28B-201ENST00000390993 SPDYE1Q8NFV5 336 aaPredicted RBP4.63□□□□□ -1.67
SNORD28B-201ENST00000390993 MKRN4PQ13434 485 aaPredicted RBP4.62□□□□□ -1.67
SNORD28B-201ENST00000390993 SSUH2Q9Y2M2 353 aa4.6□□□□□ -1.67
SNORD28B-201ENST00000390993 CLEC11AQ9Y240 323 aa4.59□□□□□ -1.67
SNORD28B-201ENST00000390993 PABPN1Q86U42 306 aaKnown RBP eCLIP4.58□□□□□ -1.68
SNORD28B-201ENST00000390993 SPDYE4A6NLX3 237 aa4.57□□□□□ -1.68
SNORD28B-201ENST00000390993 PITPNM1O00562 1244 aa4.57□□□□□ -1.68
SNORD28B-201ENST00000390993 STAG3Q9UJ98 1225 aa4.56□□□□□ -1.68
SNORD28B-201ENST00000390993 PRR29P0C7W0 189 aa4.55□□□□□ -1.68
SNORD28B-201ENST00000390993 PIP4P2Q8N4L2 257 aa4.53□□□□□ -1.68
SNORD28B-201ENST00000390993 FXR2P51116 673 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNORD28B-201ENST00000390993 PRKAR2AP13861 404 aaKnown RBP4.49□□□□□ -1.69
SNORD28B-201ENST00000390993 HAX1O00165 279 aa4.48□□□□□ -1.69
SNORD28B-201ENST00000390993 PLEKHG5O94827 1062 aa4.48□□□□□ -1.69
SNORD28B-201ENST00000390993 FKBP8Q14318 412 aa4.44□□□□□ -1.7
SNORD28B-201ENST00000390993 NPM1P06748 294 aaKnown RBP eCLIP4.42□□□□□ -1.7
SNORD28B-201ENST00000390993 CHADLQ6NUI6 762 aa4.42□□□□□ -1.7
SNORD28B-201ENST00000390993 PAK3O75914 559 aaPredicted RBP4.41□□□□□ -1.7
SNORD28B-201ENST00000390993 SP7Q8TDD2 431 aaPredicted RBP4.41□□□□□ -1.7
SNORD28B-201ENST00000390993 FBXO3Q9UK99 471 aa4.4□□□□□ -1.71
SNORD28B-201ENST00000390993 FARP1Q9Y4F1 1045 aaPredicted RBP4.4□□□□□ -1.71
SNORD28B-201ENST00000390993 PROM2Q8N271 834 aa4.39□□□□□ -1.71
SNORD28B-201ENST00000390993 PLCD3Q8N3E9 789 aa4.38□□□□□ -1.71
SNORD28B-201ENST00000390993 ZBTB47Q9UFB7 747 aaPredicted RBP4.38□□□□□ -1.71
SNORD28B-201ENST00000390993 C19orf67A6NJJ6 358 aa4.37□□□□□ -1.71
SNORD28B-201ENST00000390993 CD44P16070 742 aaKnown RBP4.37□□□□□ -1.71
SNORD28B-201ENST00000390993 CLCN6P51797 869 aa4.37□□□□□ -1.71
SNORD28B-201ENST00000390993 MIER1Q8N108 512 aa4.37□□□□□ -1.71
SNORD28B-201ENST00000390993 CREBZFQ9NS37 354 aa4.37□□□□□ -1.71
SNORD28B-201ENST00000390993 ZRANB1Q9UGI0 708 aa4.33□□□□□ -1.72
SNORD28B-201ENST00000390993 KLHL34Q8N239 644 aa4.29□□□□□ -1.72
SNORD28B-201ENST00000390993 ZNF579Q8NAF0 562 aaKnown RBP4.29□□□□□ -1.72
SNORD28B-201ENST00000390993 GABBR2O75899 941 aa4.28□□□□□ -1.72
SNORD28B-201ENST00000390993 EVX2Q03828 476 aa4.28□□□□□ -1.72
SNORD28B-201ENST00000390993 DCBLD2Q96PD2 775 aa4.28□□□□□ -1.72
SNORD28B-201ENST00000390993 FAM212AQ96EL1 285 aa4.27□□□□□ -1.73
SNORD28B-201ENST00000390993 TSPYL2Q9H2G4 693 aaPredicted RBP4.27□□□□□ -1.73
SNORD28B-201ENST00000390993 MNX1P50219 401 aaPredicted RBP4.26□□□□□ -1.73
SNORD28B-201ENST00000390993 VASPP50552 380 aaPredicted RBP4.26□□□□□ -1.73
SNORD28B-201ENST00000390993 DCAF8Q5TAQ9 597 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms