RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 AEBP2Q6ZN18 517 aaPredicted RBP32.55■■■□□ 2.8
SNORA40.4-201ENST00000390971 CHIC1Q5VXU3 224 aa31.82■■■□□ 2.68
SNORA40.4-201ENST00000390971 PHF23Q9BUL5 403 aaPredicted RBP27.94■■■□□ 2.06
SNORA40.4-201ENST00000390971 SENP3Q9H4L4 574 aaPredicted RBP27.7■■■□□ 2.02
SNORA40.4-201ENST00000390971 PLPPR3Q6T4P5 718 aa25.86■■□□□ 1.73
SNORA40.4-201ENST00000390971 FOXD1Q16676 465 aa25.67■■□□□ 1.7
SNORA40.4-201ENST00000390971 PPP6R1Q9UPN7 881 aa24.67■■□□□ 1.54
SNORA40.4-201ENST00000390971 ADRA2BP18089 450 aa24.66■■□□□ 1.54
SNORA40.4-201ENST00000390971 PIAS4Q8N2W9 510 aaPredicted RBP24.21■■□□□ 1.47
SNORA40.4-201ENST00000390971 MSH5O43196 834 aa23.73■■□□□ 1.39
SNORA40.4-201ENST00000390971 PPP4R3CPQ6ZMV5 832 aa22.77■■□□□ 1.24
SNORA40.4-201ENST00000390971 SCAF1Q9H7N4 1312 aaKnown RBP22.67■■□□□ 1.22
SNORA40.4-201ENST00000390971 MAPK8IP2Q13387 824 aaPredicted RBP22.37■■□□□ 1.17
SNORA40.4-201ENST00000390971 NCBP3Q53F19 620 aaKnown RBP22.23■■□□□ 1.15
SNORA40.4-201ENST00000390971 KCNA4P22459 653 aa22.18■■□□□ 1.14
SNORA40.4-201ENST00000390971 CNKSR2Q8WXI2 1034 aa22.16■■□□□ 1.14
SNORA40.4-201ENST00000390971 DMRT2Q9Y5R5 561 aa22.09■■□□□ 1.13
SNORA40.4-201ENST00000390971 NPM3O75607 178 aaKnown RBP21.82■■□□□ 1.08
SNORA40.4-201ENST00000390971 RNF216Q9NWF9 866 aaPredicted RBP21.72■■□□□ 1.07
SNORA40.4-201ENST00000390971 HOXD11P31277 338 aaPredicted RBP21.63■■□□□ 1.05
SNORA40.4-201ENST00000390971 POTEDQ86YR6 584 aa21.6■■□□□ 1.05
SNORA40.4-201ENST00000390971 DNAJC5BQ9UF47 199 aa21.24■□□□□ 0.99
SNORA40.4-201ENST00000390971 SLC4A1APQ9BWU0 796 aaKnown RBP21.15■□□□□ 0.98
SNORA40.4-201ENST00000390971 DCAF8L1A6NGE4 600 aa21.14■□□□□ 0.97
SNORA40.4-201ENST00000390971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.89
SNORA40.4-201ENST00000390971 SLC4A2P04920 1241 aa20.6■□□□□ 0.89
SNORA40.4-201ENST00000390971 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
SNORA40.4-201ENST00000390971 FOXD4L1Q9NU39 408 aa20.45■□□□□ 0.86
SNORA40.4-201ENST00000390971 ZBTB22O15209 634 aa20.36■□□□□ 0.85
SNORA40.4-201ENST00000390971 RNF39Q9H2S5 420 aa20.3■□□□□ 0.84
SNORA40.4-201ENST00000390971 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
SNORA40.4-201ENST00000390971 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
SNORA40.4-201ENST00000390971 MYCNP04198 464 aaPredicted RBP20.19■□□□□ 0.82
SNORA40.4-201ENST00000390971 C1QBPQ07021 282 aaKnown RBP20.1■□□□□ 0.81
SNORA40.4-201ENST00000390971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.81
SNORA40.4-201ENST00000390971 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.81
SNORA40.4-201ENST00000390971 SAMD1Q6SPF0 538 aaPredicted RBP19.99■□□□□ 0.79
SNORA40.4-201ENST00000390971 APLP2Q06481 763 aa19.89■□□□□ 0.77
SNORA40.4-201ENST00000390971 CACNB1Q02641 598 aaPredicted RBP19.82■□□□□ 0.76
SNORA40.4-201ENST00000390971 ATXN8OSP0DMR3 200 aa19.79■□□□□ 0.76
SNORA40.4-201ENST00000390971 SPINK5Q9NQ38 1064 aaPredicted RBP19.68■□□□□ 0.74
SNORA40.4-201ENST00000390971 CAPN15O75808 1086 aa19.65■□□□□ 0.74
SNORA40.4-201ENST00000390971 ATF5Q9Y2D1 282 aaPredicted RBP19.59■□□□□ 0.73
SNORA40.4-201ENST00000390971 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
SNORA40.4-201ENST00000390971 TRHP20396 242 aaPredicted RBP19.54■□□□□ 0.72
SNORA40.4-201ENST00000390971 DSG3P32926 999 aa19.31■□□□□ 0.68
SNORA40.4-201ENST00000390971 ABCB7O75027 752 aa19.23■□□□□ 0.67
SNORA40.4-201ENST00000390971 POLA2Q14181 598 aa19.23■□□□□ 0.67
SNORA40.4-201ENST00000390971 ZBTB12Q9Y330 459 aaPredicted RBP18.96■□□□□ 0.63
SNORA40.4-201ENST00000390971 FBLN2P98095 1184 aa18.87■□□□□ 0.61
SNORA40.4-201ENST00000390971 MKRN4PQ13434 485 aaPredicted RBP18.75■□□□□ 0.59
SNORA40.4-201ENST00000390971 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
SNORA40.4-201ENST00000390971 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
SNORA40.4-201ENST00000390971 SPDYE2BA6NHP3 402 aa18.43■□□□□ 0.54
SNORA40.4-201ENST00000390971 SPDYE6P0CI01 402 aa18.43■□□□□ 0.54
SNORA40.4-201ENST00000390971 SPDYE2Q495Y8 402 aa18.43■□□□□ 0.54
SNORA40.4-201ENST00000390971 SPDYE4A6NLX3 237 aa18.37■□□□□ 0.53
SNORA40.4-201ENST00000390971 FKBP8Q14318 412 aa18.35■□□□□ 0.53
SNORA40.4-201ENST00000390971 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
SNORA40.4-201ENST00000390971 SSUH2Q9Y2M2 353 aa18.24■□□□□ 0.51
SNORA40.4-201ENST00000390971 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
SNORA40.4-201ENST00000390971 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
SNORA40.4-201ENST00000390971 PROM2Q8N271 834 aa18.04■□□□□ 0.48
SNORA40.4-201ENST00000390971 REM2Q8IYK8 340 aaPredicted RBP18.01■□□□□ 0.47
SNORA40.4-201ENST00000390971 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.45
SNORA40.4-201ENST00000390971 STAG3Q9UJ98 1225 aa17.85■□□□□ 0.45
SNORA40.4-201ENST00000390971 CLEC11AQ9Y240 323 aa17.79■□□□□ 0.44
SNORA40.4-201ENST00000390971 FBXO3Q9UK99 471 aa17.78■□□□□ 0.44
SNORA40.4-201ENST00000390971 PITPNM1O00562 1244 aa17.77■□□□□ 0.44
SNORA40.4-201ENST00000390971 CHRDL2Q6WN34 429 aa17.66■□□□□ 0.42
SNORA40.4-201ENST00000390971 PRR29P0C7W0 189 aa17.65■□□□□ 0.42
SNORA40.4-201ENST00000390971 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
SNORA40.4-201ENST00000390971 VASPP50552 380 aaPredicted RBP17.47■□□□□ 0.39
SNORA40.4-201ENST00000390971 MIER1Q8N108 512 aa17.45■□□□□ 0.38
SNORA40.4-201ENST00000390971 PLCD3Q8N3E9 789 aa17.42■□□□□ 0.38
SNORA40.4-201ENST00000390971 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
SNORA40.4-201ENST00000390971 PIP4P2Q8N4L2 257 aa17.41■□□□□ 0.38
SNORA40.4-201ENST00000390971 CREBZFQ9NS37 354 aa17.38■□□□□ 0.37
SNORA40.4-201ENST00000390971 PRKAR2AP13861 404 aaKnown RBP17.35■□□□□ 0.37
SNORA40.4-201ENST00000390971 CHADLQ6NUI6 762 aa17.31■□□□□ 0.36
SNORA40.4-201ENST00000390971 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
SNORA40.4-201ENST00000390971 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
SNORA40.4-201ENST00000390971 IFNLR1Q8IU57 520 aaPredicted RBP17.21■□□□□ 0.35
SNORA40.4-201ENST00000390971 FARP1Q9Y4F1 1045 aaPredicted RBP17.19■□□□□ 0.34
SNORA40.4-201ENST00000390971 MNX1P50219 401 aaPredicted RBP17.17■□□□□ 0.34
SNORA40.4-201ENST00000390971 NPM1P06748 294 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNORA40.4-201ENST00000390971 POTEHQ6S545 545 aa17.12■□□□□ 0.33
SNORA40.4-201ENST00000390971 SPOCK2Q92563 424 aa17.06■□□□□ 0.32
SNORA40.4-201ENST00000390971 NUBP1P53384 320 aa16.97■□□□□ 0.31
SNORA40.4-201ENST00000390971 HAX1O00165 279 aa16.9■□□□□ 0.3
SNORA40.4-201ENST00000390971 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
SNORA40.4-201ENST00000390971 C19orf67A6NJJ6 358 aa16.87■□□□□ 0.29
SNORA40.4-201ENST00000390971 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
SNORA40.4-201ENST00000390971 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
SNORA40.4-201ENST00000390971 FAM212AQ96EL1 285 aa16.86■□□□□ 0.29
SNORA40.4-201ENST00000390971 DCAF8Q5TAQ9 597 aa16.84■□□□□ 0.29
SNORA40.4-201ENST00000390971 GSE1Q14687 1217 aa16.83■□□□□ 0.28
SNORA40.4-201ENST00000390971 TSPYL2Q9H2G4 693 aaPredicted RBP16.82■□□□□ 0.28
SNORA40.4-201ENST00000390971 CIZ1Q9ULV3 898 aaPredicted RBP16.79■□□□□ 0.28
SNORA40.4-201ENST00000390971 ZRANB1Q9UGI0 708 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms