RNA–Protein interactions for RNA: ENST00000390955.1

RNU6-1176P-201, Transcript of RNA, U6 small nuclear 1176, pseudogene, humanhuman

BASIC

Gene RNU6-1176P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1176P-201ENST00000390955 AEBP2Q6ZN18 517 aaPredicted RBP31.8■■■□□ 2.68
RNU6-1176P-201ENST00000390955 CHIC1Q5VXU3 224 aa30.84■■■□□ 2.53
RNU6-1176P-201ENST00000390955 SENP3Q9H4L4 574 aaPredicted RBP27.15■■□□□ 1.94
RNU6-1176P-201ENST00000390955 PHF23Q9BUL5 403 aaPredicted RBP27.04■■□□□ 1.92
RNU6-1176P-201ENST00000390955 FOXD1Q16676 465 aa25.21■■□□□ 1.63
RNU6-1176P-201ENST00000390955 PLPPR3Q6T4P5 718 aa25.04■■□□□ 1.6
RNU6-1176P-201ENST00000390955 ADRA2BP18089 450 aa23.99■■□□□ 1.43
RNU6-1176P-201ENST00000390955 PPP6R1Q9UPN7 881 aa23.94■■□□□ 1.42
RNU6-1176P-201ENST00000390955 PIAS4Q8N2W9 510 aaPredicted RBP23.7■■□□□ 1.38
RNU6-1176P-201ENST00000390955 MSH5O43196 834 aa23.54■■□□□ 1.36
RNU6-1176P-201ENST00000390955 POTEDQ86YR6 584 aa22.35■■□□□ 1.17
RNU6-1176P-201ENST00000390955 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
RNU6-1176P-201ENST00000390955 PPP4R3CPQ6ZMV5 832 aa22.03■■□□□ 1.12
RNU6-1176P-201ENST00000390955 MAPK8IP2Q13387 824 aaPredicted RBP21.79■■□□□ 1.08
RNU6-1176P-201ENST00000390955 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
RNU6-1176P-201ENST00000390955 NCBP3Q53F19 620 aaKnown RBP21.5■■□□□ 1.03
RNU6-1176P-201ENST00000390955 CNKSR2Q8WXI2 1034 aa21.45■■□□□ 1.02
RNU6-1176P-201ENST00000390955 KCNA4P22459 653 aa21.32■■□□□ 1
RNU6-1176P-201ENST00000390955 NPM3O75607 178 aaKnown RBP21.07■□□□□ 0.96
RNU6-1176P-201ENST00000390955 RNF216Q9NWF9 866 aaPredicted RBP21.04■□□□□ 0.96
RNU6-1176P-201ENST00000390955 HOXD11P31277 338 aaPredicted RBP20.95■□□□□ 0.94
RNU6-1176P-201ENST00000390955 DCAF8L1A6NGE4 600 aa20.83■□□□□ 0.93
RNU6-1176P-201ENST00000390955 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
RNU6-1176P-201ENST00000390955 DNAJC5BQ9UF47 199 aa20.3■□□□□ 0.84
RNU6-1176P-201ENST00000390955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.17■□□□□ 0.82
RNU6-1176P-201ENST00000390955 RNF39Q9H2S5 420 aa20.09■□□□□ 0.81
RNU6-1176P-201ENST00000390955 CACNB1Q02641 598 aaPredicted RBP19.96■□□□□ 0.79
RNU6-1176P-201ENST00000390955 SLC4A2P04920 1241 aa19.87■□□□□ 0.77
RNU6-1176P-201ENST00000390955 C1QBPQ07021 282 aaKnown RBP19.84■□□□□ 0.77
RNU6-1176P-201ENST00000390955 FOXD4L1Q9NU39 408 aa19.7■□□□□ 0.74
RNU6-1176P-201ENST00000390955 U3KPZ7 1027 aaPredicted RBP19.67■□□□□ 0.74
RNU6-1176P-201ENST00000390955 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
RNU6-1176P-201ENST00000390955 ZBTB22O15209 634 aa19.54■□□□□ 0.72
RNU6-1176P-201ENST00000390955 MYCNP04198 464 aaPredicted RBP19.52■□□□□ 0.72
RNU6-1176P-201ENST00000390955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.48■□□□□ 0.71
RNU6-1176P-201ENST00000390955 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
RNU6-1176P-201ENST00000390955 SAMD1Q6SPF0 538 aaPredicted RBP19.39■□□□□ 0.69
RNU6-1176P-201ENST00000390955 APLP2Q06481 763 aa19.37■□□□□ 0.69
RNU6-1176P-201ENST00000390955 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
RNU6-1176P-201ENST00000390955 CAPN15O75808 1086 aa19.27■□□□□ 0.68
RNU6-1176P-201ENST00000390955 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
RNU6-1176P-201ENST00000390955 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
RNU6-1176P-201ENST00000390955 ZNF219Q9P2Y4 722 aaPredicted RBP19.07■□□□□ 0.64
RNU6-1176P-201ENST00000390955 ATXN8OSP0DMR3 200 aa18.98■□□□□ 0.63
RNU6-1176P-201ENST00000390955 ATF5Q9Y2D1 282 aaPredicted RBP18.93■□□□□ 0.62
RNU6-1176P-201ENST00000390955 DSG3P32926 999 aa18.91■□□□□ 0.62
RNU6-1176P-201ENST00000390955 ABCB7O75027 752 aa18.86■□□□□ 0.61
RNU6-1176P-201ENST00000390955 POLA2Q14181 598 aa18.7■□□□□ 0.58
RNU6-1176P-201ENST00000390955 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
RNU6-1176P-201ENST00000390955 FBLN2P98095 1184 aa18.32■□□□□ 0.52
RNU6-1176P-201ENST00000390955 MKRN4PQ13434 485 aaPredicted RBP18.09■□□□□ 0.49
RNU6-1176P-201ENST00000390955 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
RNU6-1176P-201ENST00000390955 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
RNU6-1176P-201ENST00000390955 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
RNU6-1176P-201ENST00000390955 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
RNU6-1176P-201ENST00000390955 SPDYE2Q495Y8 402 aa17.86■□□□□ 0.45
RNU6-1176P-201ENST00000390955 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
RNU6-1176P-201ENST00000390955 SPDYE4A6NLX3 237 aa17.73■□□□□ 0.43
RNU6-1176P-201ENST00000390955 AKT1S1Q96B36 256 aa17.73■□□□□ 0.43
RNU6-1176P-201ENST00000390955 SSUH2Q9Y2M2 353 aa17.63■□□□□ 0.41
RNU6-1176P-201ENST00000390955 FKBP8Q14318 412 aa17.61■□□□□ 0.41
RNU6-1176P-201ENST00000390955 POTEHQ6S545 545 aa17.6■□□□□ 0.41
RNU6-1176P-201ENST00000390955 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
RNU6-1176P-201ENST00000390955 REM2Q8IYK8 340 aaPredicted RBP17.56■□□□□ 0.4
RNU6-1176P-201ENST00000390955 CHRDL2Q6WN34 429 aa17.52■□□□□ 0.4
RNU6-1176P-201ENST00000390955 CLEC11AQ9Y240 323 aa17.43■□□□□ 0.38
RNU6-1176P-201ENST00000390955 SPDYE1Q8NFV5 336 aaPredicted RBP17.42■□□□□ 0.38
RNU6-1176P-201ENST00000390955 PITPNM1O00562 1244 aa17.37■□□□□ 0.37
RNU6-1176P-201ENST00000390955 STAG3Q9UJ98 1225 aa17.25■□□□□ 0.35
RNU6-1176P-201ENST00000390955 PROM2Q8N271 834 aa17.22■□□□□ 0.35
RNU6-1176P-201ENST00000390955 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
RNU6-1176P-201ENST00000390955 PIP4P2Q8N4L2 257 aa17.16■□□□□ 0.34
RNU6-1176P-201ENST00000390955 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.33
RNU6-1176P-201ENST00000390955 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
RNU6-1176P-201ENST00000390955 PRKAR2AP13861 404 aaKnown RBP16.98■□□□□ 0.31
RNU6-1176P-201ENST00000390955 CHADLQ6NUI6 762 aa16.94■□□□□ 0.3
RNU6-1176P-201ENST00000390955 PLEKHG5O94827 1062 aa16.9■□□□□ 0.3
RNU6-1176P-201ENST00000390955 MIER1Q8N108 512 aa16.89■□□□□ 0.29
RNU6-1176P-201ENST00000390955 PLCD3Q8N3E9 789 aa16.88■□□□□ 0.29
RNU6-1176P-201ENST00000390955 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
RNU6-1176P-201ENST00000390955 VASPP50552 380 aaPredicted RBP16.77■□□□□ 0.28
RNU6-1176P-201ENST00000390955 HAX1O00165 279 aa16.76■□□□□ 0.27
RNU6-1176P-201ENST00000390955 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
RNU6-1176P-201ENST00000390955 NPM1P06748 294 aaKnown RBP eCLIP16.67■□□□□ 0.26
RNU6-1176P-201ENST00000390955 ZBTB47Q9UFB7 747 aaPredicted RBP16.67■□□□□ 0.26
RNU6-1176P-201ENST00000390955 KLHL34Q8N239 644 aa16.66■□□□□ 0.26
RNU6-1176P-201ENST00000390955 SP7Q8TDD2 431 aaPredicted RBP16.66■□□□□ 0.26
RNU6-1176P-201ENST00000390955 C19orf67A6NJJ6 358 aa16.57■□□□□ 0.24
RNU6-1176P-201ENST00000390955 MNX1P50219 401 aaPredicted RBP16.55■□□□□ 0.24
RNU6-1176P-201ENST00000390955 EVX2Q03828 476 aa16.53■□□□□ 0.24
RNU6-1176P-201ENST00000390955 CD44P16070 742 aaKnown RBP16.5■□□□□ 0.23
RNU6-1176P-201ENST00000390955 PAK3O75914 559 aaPredicted RBP16.49■□□□□ 0.23
RNU6-1176P-201ENST00000390955 IFNLR1Q8IU57 520 aaPredicted RBP16.46■□□□□ 0.23
RNU6-1176P-201ENST00000390955 TSPYL2Q9H2G4 693 aaPredicted RBP16.4■□□□□ 0.22
RNU6-1176P-201ENST00000390955 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
RNU6-1176P-201ENST00000390955 SPOCK2Q92563 424 aa16.38■□□□□ 0.21
RNU6-1176P-201ENST00000390955 RASEFQ8IZ41 740 aa16.34■□□□□ 0.21
RNU6-1176P-201ENST00000390955 FAM212AQ96EL1 285 aa16.34■□□□□ 0.21
RNU6-1176P-201ENST00000390955 NUBP1P53384 320 aa16.32■□□□□ 0.2
RNU6-1176P-201ENST00000390955 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms