RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 NISCHQ9Y2I1 1504 aa3.95□□□□□ -1.78
TRAJ49-201ENST00000390488 CCDC180Q9P1Z9 1646 aa3.47□□□□□ -1.85
TRAJ49-201ENST00000390488 DCAF1Q9Y4B6 1507 aa3.43□□□□□ -1.86
TRAJ49-201ENST00000390488 ZCCHC6Q5VYS8 1495 aaKnown RBP3.41□□□□□ -1.86
TRAJ49-201ENST00000390488 MYO15BQ96JP2 1530 aa3.36□□□□□ -1.87
TRAJ49-201ENST00000390488 PELP1Q8IZL8 1130 aaKnown RBP3.27□□□□□ -1.89
TRAJ49-201ENST00000390488 ZEB1P37275 1124 aaPredicted RBP3.25□□□□□ -1.89
TRAJ49-201ENST00000390488 MYT1Q01538 1121 aa3.24□□□□□ -1.89
TRAJ49-201ENST00000390488 ABCC9O60706 1549 aa3.24□□□□□ -1.89
TRAJ49-201ENST00000390488 HRCP23327 699 aa3.21□□□□□ -1.9
TRAJ49-201ENST00000390488 NACADO15069 1562 aa3.17□□□□□ -1.9
TRAJ49-201ENST00000390488 RB1CC1Q8TDY2 1594 aa3.17□□□□□ -1.9
TRAJ49-201ENST00000390488 CHIC1Q5VXU3 224 aa3.15□□□□□ -1.91
TRAJ49-201ENST00000390488 EEA1Q15075 1411 aa3.15□□□□□ -1.91
TRAJ49-201ENST00000390488 SHROOM4Q9ULL8 1493 aa3.15□□□□□ -1.91
TRAJ49-201ENST00000390488 TRIM26Q12899 539 aaPredicted RBP3.14□□□□□ -1.91
TRAJ49-201ENST00000390488 CLSPNQ9HAW4 1339 aa3.14□□□□□ -1.91
TRAJ49-201ENST00000390488 SUPT5HO00267 1087 aaKnown RBP3.11□□□□□ -1.91
TRAJ49-201ENST00000390488 BAZ1AQ9NRL2 1556 aaPredicted RBP3.11□□□□□ -1.91
TRAJ49-201ENST00000390488 WRNQ14191 1432 aaPredicted RBP eCLIP3.1□□□□□ -1.91
TRAJ49-201ENST00000390488 RSF1Q96T23 1441 aaPredicted RBP3.1□□□□□ -1.91
TRAJ49-201ENST00000390488 TTBK1Q5TCY1 1321 aaPredicted RBP3.08□□□□□ -1.92
TRAJ49-201ENST00000390488 PEG3Q9GZU2 1588 aa3.05□□□□□ -1.92
TRAJ49-201ENST00000390488 TOP2AP11388 1531 aaKnown RBP3.05□□□□□ -1.92
TRAJ49-201ENST00000390488 CENPBP07199 599 aaPredicted RBP3.05□□□□□ -1.92
TRAJ49-201ENST00000390488 EIF4G1Q04637 1599 aaKnown RBP3.04□□□□□ -1.92
TRAJ49-201ENST00000390488 BAZ1BQ9UIG0 1483 aaKnown RBP3.04□□□□□ -1.92
TRAJ49-201ENST00000390488 PCGF6Q9BYE7 350 aa3.04□□□□□ -1.92
TRAJ49-201ENST00000390488 TRIM41Q8WV44 630 aa3.03□□□□□ -1.92
TRAJ49-201ENST00000390488 TNIKQ9UKE5 1360 aa3.02□□□□□ -1.93
TRAJ49-201ENST00000390488 SMARCA2P51531 1590 aa3.02□□□□□ -1.93
TRAJ49-201ENST00000390488 GOLGA3Q08378 1498 aa3.02□□□□□ -1.93
TRAJ49-201ENST00000390488 KIF21BO75037 1637 aa3.01□□□□□ -1.93
TRAJ49-201ENST00000390488 SCRIBQ14160 1630 aa3.01□□□□□ -1.93
TRAJ49-201ENST00000390488 ACIN1Q9UKV3 1341 aaKnown RBP3.01□□□□□ -1.93
TRAJ49-201ENST00000390488 CEP164Q9UPV0 1460 aa3.01□□□□□ -1.93
TRAJ49-201ENST00000390488 ERICH3Q5RHP9 1530 aa3□□□□□ -1.93
TRAJ49-201ENST00000390488 SMARCA4P51532 1647 aa2.99□□□□□ -1.93
TRAJ49-201ENST00000390488 MROH2BQ7Z745 1585 aa2.97□□□□□ -1.93
TRAJ49-201ENST00000390488 CEP162Q5TB80 1403 aa2.97□□□□□ -1.93
TRAJ49-201ENST00000390488 MAP3K1Q13233 1512 aa2.97□□□□□ -1.93
TRAJ49-201ENST00000390488 VPS8Q8N3P4 1428 aa2.96□□□□□ -1.94
TRAJ49-201ENST00000390488 TIMELESSQ9UNS1 1208 aa2.96□□□□□ -1.94
TRAJ49-201ENST00000390488 HMGXB3Q12766 1538 aa2.96□□□□□ -1.94
TRAJ49-201ENST00000390488 CUX2O14529 1486 aa2.96□□□□□ -1.94
TRAJ49-201ENST00000390488 DCAF8L2P0C7V8 631 aa2.95□□□□□ -1.94
TRAJ49-201ENST00000390488 MYT1LQ9UL68 1186 aa2.94□□□□□ -1.94
TRAJ49-201ENST00000390488 WIZO95785 1651 aa2.93□□□□□ -1.94
TRAJ49-201ENST00000390488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.93□□□□□ -1.94
TRAJ49-201ENST00000390488 CCER1Q8TC90 406 aaPredicted RBP2.93□□□□□ -1.94
TRAJ49-201ENST00000390488 TOP2BQ02880 1626 aa2.93□□□□□ -1.94
TRAJ49-201ENST00000390488 CECR2Q9BXF3 1484 aa2.92□□□□□ -1.94
TRAJ49-201ENST00000390488 APLP2Q06481 763 aa2.92□□□□□ -1.94
TRAJ49-201ENST00000390488 CSRNP3Q8WYN3 585 aa2.92□□□□□ -1.94
TRAJ49-201ENST00000390488 BIVM-ERCC5R4GMW8 1640 aa2.92□□□□□ -1.94
TRAJ49-201ENST00000390488 FHAD1B1AJZ9 1412 aa2.92□□□□□ -1.94
TRAJ49-201ENST00000390488 CLIP1P30622 1438 aa2.92□□□□□ -1.94
TRAJ49-201ENST00000390488 RRBP1Q9P2E9 1410 aaKnown RBP2.92□□□□□ -1.94
TRAJ49-201ENST00000390488 CCDC88BA6NC98 1476 aa2.91□□□□□ -1.94
TRAJ49-201ENST00000390488 DIEXFQ68CQ4 756 aaKnown RBP2.91□□□□□ -1.94
TRAJ49-201ENST00000390488 PRXQ9BXM0 1461 aa2.9□□□□□ -1.94
TRAJ49-201ENST00000390488 EFCAB5A4FU69 1503 aa2.9□□□□□ -1.95
TRAJ49-201ENST00000390488 ZNF316A6NFI3 1004 aaPredicted RBP2.9□□□□□ -1.95
TRAJ49-201ENST00000390488 KIF27Q86VH2 1401 aa2.9□□□□□ -1.95
TRAJ49-201ENST00000390488 THOC2Q8NI27 1593 aaKnown RBP2.9□□□□□ -1.95
TRAJ49-201ENST00000390488 LOC105371045A0A1W2PR82 267 aa2.89□□□□□ -1.95
TRAJ49-201ENST00000390488 AQRO60306 1485 aaKnown RBP eCLIP2.89□□□□□ -1.95
TRAJ49-201ENST00000390488 NCAPD3P42695 1498 aa2.89□□□□□ -1.95
TRAJ49-201ENST00000390488 ATAD2BQ9ULI0 1458 aa2.89□□□□□ -1.95
TRAJ49-201ENST00000390488 SYNJ1O43426 1573 aa2.88□□□□□ -1.95
TRAJ49-201ENST00000390488 ABCC8Q09428 1581 aa2.88□□□□□ -1.95
TRAJ49-201ENST00000390488 AKNAQ7Z591 1439 aa2.88□□□□□ -1.95
TRAJ49-201ENST00000390488 ERICH6BQ5W0A0 696 aa2.88□□□□□ -1.95
TRAJ49-201ENST00000390488 PRDM2Q13029 1718 aa2.88□□□□□ -1.95
TRAJ49-201ENST00000390488 CCDC18Q5T9S5 1454 aa2.87□□□□□ -1.95
TRAJ49-201ENST00000390488 KIF21AQ7Z4S6 1674 aa2.87□□□□□ -1.95
TRAJ49-201ENST00000390488 CUX1P39880 1505 aa2.87□□□□□ -1.95
TRAJ49-201ENST00000390488 SCAF1Q9H7N4 1312 aaKnown RBP2.87□□□□□ -1.95
TRAJ49-201ENST00000390488 CFTRP13569 1480 aa2.86□□□□□ -1.95
TRAJ49-201ENST00000390488 FYCO1Q9BQS8 1478 aa2.86□□□□□ -1.95
TRAJ49-201ENST00000390488 PPARGC1BQ86YN6 1023 aaKnown RBP2.86□□□□□ -1.95
TRAJ49-201ENST00000390488 WDR97A6NE52 1622 aa2.86□□□□□ -1.95
TRAJ49-201ENST00000390488 CCNB3Q8WWL7 1395 aa2.86□□□□□ -1.95
TRAJ49-201ENST00000390488 CC2D2AQ9P2K1 1620 aa2.86□□□□□ -1.95
TRAJ49-201ENST00000390488 FMN1Q68DA7 1419 aa2.85□□□□□ -1.95
TRAJ49-201ENST00000390488 UNC13AQ9UPW8 1703 aa2.85□□□□□ -1.95
TRAJ49-201ENST00000390488 UBTFP17480 764 aaKnown RBP2.85□□□□□ -1.95
TRAJ49-201ENST00000390488 FAM9AQ8IZU1 332 aaPredicted RBP2.85□□□□□ -1.95
TRAJ49-201ENST00000390488 BICRAQ9NZM4 1560 aa2.85□□□□□ -1.95
TRAJ49-201ENST00000390488 CUL7Q14999 1698 aa2.85□□□□□ -1.95
TRAJ49-201ENST00000390488 CFAP43Q8NDM7 1665 aa2.85□□□□□ -1.95
TRAJ49-201ENST00000390488 SOGA1O94964 1423 aa2.85□□□□□ -1.95
TRAJ49-201ENST00000390488 TIAM1Q13009 1591 aa2.84□□□□□ -1.95
TRAJ49-201ENST00000390488 CCER2I3L3R5 266 aa2.84□□□□□ -1.95
TRAJ49-201ENST00000390488 DHX57Q6P158 1386 aaKnown RBP2.84□□□□□ -1.96
TRAJ49-201ENST00000390488 RAPGEF2Q9Y4G8 1499 aa2.84□□□□□ -1.96
TRAJ49-201ENST00000390488 NEFLP07196 543 aa2.83□□□□□ -1.96
TRAJ49-201ENST00000390488 GTF3C3Q9Y5Q9 886 aa2.83□□□□□ -1.96
TRAJ49-201ENST00000390488 ARAP1Q96P48 1450 aa2.83□□□□□ -1.96
TRAJ49-201ENST00000390488 NEUROD1Q13562 356 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms