RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 AEBP2Q6ZN18 517 aaPredicted RBP11.11□□□□□ -0.63
TRAV41-201ENST00000390468 CHIC1Q5VXU3 224 aa10.44□□□□□ -0.74
TRAV41-201ENST00000390468 SENP3Q9H4L4 574 aaPredicted RBP9.48□□□□□ -0.89
TRAV41-201ENST00000390468 PHF23Q9BUL5 403 aaPredicted RBP9.36□□□□□ -0.91
TRAV41-201ENST00000390468 FOXD1Q16676 465 aa8.87□□□□□ -0.99
TRAV41-201ENST00000390468 PLPPR3Q6T4P5 718 aa8.32□□□□□ -1.08
TRAV41-201ENST00000390468 PIAS4Q8N2W9 510 aaPredicted RBP8.32□□□□□ -1.08
TRAV41-201ENST00000390468 MSH5O43196 834 aa8.3□□□□□ -1.08
TRAV41-201ENST00000390468 POTEDQ86YR6 584 aa8.28□□□□□ -1.08
TRAV41-201ENST00000390468 ADRA2BP18089 450 aa8.24□□□□□ -1.09
TRAV41-201ENST00000390468 PPP6R1Q9UPN7 881 aa8.23□□□□□ -1.09
TRAV41-201ENST00000390468 MAPK8IP2Q13387 824 aaPredicted RBP7.59□□□□□ -1.19
TRAV41-201ENST00000390468 DMRT2Q9Y5R5 561 aa7.49□□□□□ -1.21
TRAV41-201ENST00000390468 SCAF1Q9H7N4 1312 aaKnown RBP7.49□□□□□ -1.21
TRAV41-201ENST00000390468 DCAF8L1A6NGE4 600 aa7.35□□□□□ -1.23
TRAV41-201ENST00000390468 PPP4R3CPQ6ZMV5 832 aa7.31□□□□□ -1.24
TRAV41-201ENST00000390468 CACNB1Q02641 598 aaPredicted RBP7.26□□□□□ -1.25
TRAV41-201ENST00000390468 CNKSR2Q8WXI2 1034 aa7.16□□□□□ -1.26
TRAV41-201ENST00000390468 HOXD11P31277 338 aaPredicted RBP7.15□□□□□ -1.26
TRAV41-201ENST00000390468 RNF216Q9NWF9 866 aaPredicted RBP7.09□□□□□ -1.27
TRAV41-201ENST00000390468 RNF39Q9H2S5 420 aa7.07□□□□□ -1.28
TRAV41-201ENST00000390468 NCBP3Q53F19 620 aaKnown RBP7□□□□□ -1.29
TRAV41-201ENST00000390468 C1QBPQ07021 282 aaKnown RBP6.95□□□□□ -1.3
TRAV41-201ENST00000390468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.93□□□□□ -1.3
TRAV41-201ENST00000390468 NPM3O75607 178 aaKnown RBP6.89□□□□□ -1.31
TRAV41-201ENST00000390468 DNAJC5BQ9UF47 199 aa6.83□□□□□ -1.32
TRAV41-201ENST00000390468 CAPN15O75808 1086 aa6.72□□□□□ -1.33
TRAV41-201ENST00000390468 U3KPZ7 1027 aaPredicted RBP6.72□□□□□ -1.33
TRAV41-201ENST00000390468 KCNA4P22459 653 aa6.71□□□□□ -1.34
TRAV41-201ENST00000390468 SPINK5Q9NQ38 1064 aaPredicted RBP6.69□□□□□ -1.34
TRAV41-201ENST00000390468 DSG3P32926 999 aa6.61□□□□□ -1.35
TRAV41-201ENST00000390468 TRHP20396 242 aaPredicted RBP6.6□□□□□ -1.35
TRAV41-201ENST00000390468 SLC4A2P04920 1241 aa6.59□□□□□ -1.35
TRAV41-201ENST00000390468 ABCB7O75027 752 aa6.57□□□□□ -1.36
TRAV41-201ENST00000390468 APLP2Q06481 763 aa6.51□□□□□ -1.37
TRAV41-201ENST00000390468 ZNF219Q9P2Y4 722 aaPredicted RBP6.5□□□□□ -1.37
TRAV41-201ENST00000390468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.48□□□□□ -1.37
TRAV41-201ENST00000390468 HNRNPUL2Q1KMD3 747 aaKnown RBP6.48□□□□□ -1.37
TRAV41-201ENST00000390468 POTEHQ6S545 545 aa6.48□□□□□ -1.37
TRAV41-201ENST00000390468 SAMD1Q6SPF0 538 aaPredicted RBP6.45□□□□□ -1.38
TRAV41-201ENST00000390468 MYCNP04198 464 aaPredicted RBP6.37□□□□□ -1.39
TRAV41-201ENST00000390468 POLA2Q14181 598 aa6.35□□□□□ -1.39
TRAV41-201ENST00000390468 SLC4A1APQ9BWU0 796 aaKnown RBP6.33□□□□□ -1.4
TRAV41-201ENST00000390468 RBM42Q9BTD8 480 aaKnown RBP6.31□□□□□ -1.4
TRAV41-201ENST00000390468 FOXD4L1Q9NU39 408 aa6.26□□□□□ -1.41
TRAV41-201ENST00000390468 ATF5Q9Y2D1 282 aaPredicted RBP6.26□□□□□ -1.41
TRAV41-201ENST00000390468 CHRDL2Q6WN34 429 aa6.24□□□□□ -1.41
TRAV41-201ENST00000390468 OSCARQ8IYS5 282 aa6.18□□□□□ -1.42
TRAV41-201ENST00000390468 ZBTB12Q9Y330 459 aaPredicted RBP6.17□□□□□ -1.42
TRAV41-201ENST00000390468 ZBTB22O15209 634 aa6.15□□□□□ -1.42
TRAV41-201ENST00000390468 AKT1S1Q96B36 256 aa6.14□□□□□ -1.43
TRAV41-201ENST00000390468 REM2Q8IYK8 340 aaPredicted RBP6.11□□□□□ -1.43
TRAV41-201ENST00000390468 PIP4P2Q8N4L2 257 aa6.07□□□□□ -1.44
TRAV41-201ENST00000390468 PITPNM1O00562 1244 aa6.06□□□□□ -1.44
TRAV41-201ENST00000390468 HAX1O00165 279 aa6.03□□□□□ -1.44
TRAV41-201ENST00000390468 FBLN2P98095 1184 aa6.03□□□□□ -1.44
TRAV41-201ENST00000390468 SP7Q8TDD2 431 aaPredicted RBP6.03□□□□□ -1.44
TRAV41-201ENST00000390468 ATXN8OSP0DMR3 200 aa6.01□□□□□ -1.45
TRAV41-201ENST00000390468 CLEC11AQ9Y240 323 aa6□□□□□ -1.45
TRAV41-201ENST00000390468 SPDYE2BA6NHP3 402 aa5.97□□□□□ -1.45
TRAV41-201ENST00000390468 SPDYE6P0CI01 402 aa5.97□□□□□ -1.45
TRAV41-201ENST00000390468 SPDYE2Q495Y8 402 aa5.97□□□□□ -1.45
TRAV41-201ENST00000390468 FXR2P51116 673 aaKnown RBP eCLIP5.96□□□□□ -1.46
TRAV41-201ENST00000390468 MKRN4PQ13434 485 aaPredicted RBP5.94□□□□□ -1.46
TRAV41-201ENST00000390468 ZNF692Q9BU19 519 aaPredicted RBP5.94□□□□□ -1.46
TRAV41-201ENST00000390468 PRKAR2AP13861 404 aaKnown RBP5.93□□□□□ -1.46
TRAV41-201ENST00000390468 EVX2Q03828 476 aa5.91□□□□□ -1.46
TRAV41-201ENST00000390468 SPDYE1Q8NFV5 336 aaPredicted RBP5.91□□□□□ -1.46
TRAV41-201ENST00000390468 CHADLQ6NUI6 762 aa5.87□□□□□ -1.47
TRAV41-201ENST00000390468 PABPN1Q86U42 306 aaKnown RBP eCLIP5.86□□□□□ -1.47
TRAV41-201ENST00000390468 SSUH2Q9Y2M2 353 aa5.86□□□□□ -1.47
TRAV41-201ENST00000390468 PRR29P0C7W0 189 aa5.83□□□□□ -1.48
TRAV41-201ENST00000390468 C19orf67A6NJJ6 358 aa5.79□□□□□ -1.48
TRAV41-201ENST00000390468 EHMT2Q96KQ7 1210 aa5.79□□□□□ -1.48
TRAV41-201ENST00000390468 CSRNP3Q8WYN3 585 aa5.78□□□□□ -1.48
TRAV41-201ENST00000390468 GABBR2O75899 941 aa5.76□□□□□ -1.49
TRAV41-201ENST00000390468 CD44P16070 742 aaKnown RBP5.74□□□□□ -1.49
TRAV41-201ENST00000390468 FARP1Q9Y4F1 1045 aaPredicted RBP5.72□□□□□ -1.49
TRAV41-201ENST00000390468 LHX8Q68G74 356 aa5.67□□□□□ -1.5
TRAV41-201ENST00000390468 SPDYE4A6NLX3 237 aa5.65□□□□□ -1.5
TRAV41-201ENST00000390468 ZRANB1Q9UGI0 708 aa5.65□□□□□ -1.5
TRAV41-201ENST00000390468 DCBLD2Q96PD2 775 aa5.63□□□□□ -1.51
TRAV41-201ENST00000390468 POTEIP0CG38 1075 aa5.62□□□□□ -1.51
TRAV41-201ENST00000390468 CREBZFQ9NS37 354 aa5.62□□□□□ -1.51
TRAV41-201ENST00000390468 STAG3Q9UJ98 1225 aa5.62□□□□□ -1.51
TRAV41-201ENST00000390468 PAK3O75914 559 aaPredicted RBP5.58□□□□□ -1.52
TRAV41-201ENST00000390468 ZNF579Q8NAF0 562 aaKnown RBP5.58□□□□□ -1.52
TRAV41-201ENST00000390468 GALR2O43603 387 aaPredicted RBP5.57□□□□□ -1.52
TRAV41-201ENST00000390468 PHF12Q96QT6 1004 aa5.57□□□□□ -1.52
TRAV41-201ENST00000390468 NPM1P06748 294 aaKnown RBP eCLIP5.54□□□□□ -1.52
TRAV41-201ENST00000390468 CLCN6P51797 869 aa5.54□□□□□ -1.52
TRAV41-201ENST00000390468 NISCHQ9Y2I1 1504 aa5.5□□□□□ -1.53
TRAV41-201ENST00000390468 TSPYL2Q9H2G4 693 aaPredicted RBP5.5□□□□□ -1.53
TRAV41-201ENST00000390468 MNX1P50219 401 aaPredicted RBP5.48□□□□□ -1.53
TRAV41-201ENST00000390468 PLSCR2Q9NRY7 297 aa5.48□□□□□ -1.53
TRAV41-201ENST00000390468 MS4A3Q96HJ5 214 aa5.47□□□□□ -1.53
TRAV41-201ENST00000390468 PELP1Q8IZL8 1130 aaKnown RBP5.45□□□□□ -1.54
TRAV41-201ENST00000390468 POTEB2H3BUK9 544 aa5.44□□□□□ -1.54
TRAV41-201ENST00000390468 MIER1Q8N108 512 aa5.44□□□□□ -1.54
TRAV41-201ENST00000390468 OTUD5Q96G74 571 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms