RNA–Protein interactions for RNA: ENST00000385247.1

MIR548B-201, Transcript of microRNA 548b, humanhuman

BASIC

Gene MIR548B, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548B-201ENST00000385247 AEBP2Q6ZN18 517 aaPredicted RBP11.43□□□□□ -0.58
MIR548B-201ENST00000385247 CHIC1Q5VXU3 224 aa11.19□□□□□ -0.62
MIR548B-201ENST00000385247 PHF23Q9BUL5 403 aaPredicted RBP9.81□□□□□ -0.84
MIR548B-201ENST00000385247 SENP3Q9H4L4 574 aaPredicted RBP9.76□□□□□ -0.85
MIR548B-201ENST00000385247 PLPPR3Q6T4P5 718 aa9.11□□□□□ -0.95
MIR548B-201ENST00000385247 FOXD1Q16676 465 aa9.03□□□□□ -0.96
MIR548B-201ENST00000385247 ADRA2BP18089 450 aa8.68□□□□□ -1.02
MIR548B-201ENST00000385247 PPP6R1Q9UPN7 881 aa8.66□□□□□ -1.02
MIR548B-201ENST00000385247 PIAS4Q8N2W9 510 aaPredicted RBP8.54□□□□□ -1.04
MIR548B-201ENST00000385247 MSH5O43196 834 aa8.37□□□□□ -1.07
MIR548B-201ENST00000385247 PPP4R3CPQ6ZMV5 832 aa8.02□□□□□ -1.13
MIR548B-201ENST00000385247 SCAF1Q9H7N4 1312 aaKnown RBP8.02□□□□□ -1.13
MIR548B-201ENST00000385247 MAPK8IP2Q13387 824 aaPredicted RBP7.87□□□□□ -1.15
MIR548B-201ENST00000385247 NCBP3Q53F19 620 aaKnown RBP7.86□□□□□ -1.15
MIR548B-201ENST00000385247 CNKSR2Q8WXI2 1034 aa7.81□□□□□ -1.16
MIR548B-201ENST00000385247 KCNA4P22459 653 aa7.79□□□□□ -1.16
MIR548B-201ENST00000385247 DMRT2Q9Y5R5 561 aa7.77□□□□□ -1.17
MIR548B-201ENST00000385247 NPM3O75607 178 aaKnown RBP7.67□□□□□ -1.18
MIR548B-201ENST00000385247 RNF216Q9NWF9 866 aaPredicted RBP7.65□□□□□ -1.18
MIR548B-201ENST00000385247 HOXD11P31277 338 aaPredicted RBP7.6□□□□□ -1.19
MIR548B-201ENST00000385247 POTEDQ86YR6 584 aa7.6□□□□□ -1.19
MIR548B-201ENST00000385247 DCAF8L1A6NGE4 600 aa7.49□□□□□ -1.21
MIR548B-201ENST00000385247 SLC4A1APQ9BWU0 796 aaKnown RBP7.45□□□□□ -1.22
MIR548B-201ENST00000385247 DNAJC5BQ9UF47 199 aa7.43□□□□□ -1.22
MIR548B-201ENST00000385247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.3□□□□□ -1.24
MIR548B-201ENST00000385247 SLC4A2P04920 1241 aa7.23□□□□□ -1.25
MIR548B-201ENST00000385247 EHMT2Q96KQ7 1210 aa7.21□□□□□ -1.26
MIR548B-201ENST00000385247 FOXD4L1Q9NU39 408 aa7.2□□□□□ -1.26
MIR548B-201ENST00000385247 RNF39Q9H2S5 420 aa7.14□□□□□ -1.27
MIR548B-201ENST00000385247 ZBTB22O15209 634 aa7.12□□□□□ -1.27
MIR548B-201ENST00000385247 CSRNP3Q8WYN3 585 aa7.12□□□□□ -1.27
MIR548B-201ENST00000385247 MYCNP04198 464 aaPredicted RBP7.11□□□□□ -1.27
MIR548B-201ENST00000385247 U3KPZ7 1027 aaPredicted RBP7.11□□□□□ -1.27
MIR548B-201ENST00000385247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.1□□□□□ -1.27
MIR548B-201ENST00000385247 HNRNPUL2Q1KMD3 747 aaKnown RBP7.1□□□□□ -1.27
MIR548B-201ENST00000385247 C1QBPQ07021 282 aaKnown RBP7.09□□□□□ -1.27
MIR548B-201ENST00000385247 SAMD1Q6SPF0 538 aaPredicted RBP7.05□□□□□ -1.28
MIR548B-201ENST00000385247 APLP2Q06481 763 aa7.04□□□□□ -1.28
MIR548B-201ENST00000385247 CACNB1Q02641 598 aaPredicted RBP7.02□□□□□ -1.29
MIR548B-201ENST00000385247 ATXN8OSP0DMR3 200 aa6.96□□□□□ -1.3
MIR548B-201ENST00000385247 CAPN15O75808 1086 aa6.95□□□□□ -1.3
MIR548B-201ENST00000385247 SPINK5Q9NQ38 1064 aaPredicted RBP6.92□□□□□ -1.3
MIR548B-201ENST00000385247 TRHP20396 242 aaPredicted RBP6.91□□□□□ -1.3
MIR548B-201ENST00000385247 ZNF219Q9P2Y4 722 aaPredicted RBP6.91□□□□□ -1.3
MIR548B-201ENST00000385247 ATF5Q9Y2D1 282 aaPredicted RBP6.87□□□□□ -1.31
MIR548B-201ENST00000385247 DSG3P32926 999 aa6.8□□□□□ -1.32
MIR548B-201ENST00000385247 ABCB7O75027 752 aa6.79□□□□□ -1.32
MIR548B-201ENST00000385247 POLA2Q14181 598 aa6.78□□□□□ -1.32
MIR548B-201ENST00000385247 ZBTB12Q9Y330 459 aaPredicted RBP6.69□□□□□ -1.34
MIR548B-201ENST00000385247 FBLN2P98095 1184 aa6.67□□□□□ -1.34
MIR548B-201ENST00000385247 MKRN4PQ13434 485 aaPredicted RBP6.57□□□□□ -1.36
MIR548B-201ENST00000385247 OSCARQ8IYS5 282 aa6.52□□□□□ -1.37
MIR548B-201ENST00000385247 RBM42Q9BTD8 480 aaKnown RBP6.52□□□□□ -1.37
MIR548B-201ENST00000385247 SPDYE2BA6NHP3 402 aa6.5□□□□□ -1.37
MIR548B-201ENST00000385247 SPDYE6P0CI01 402 aa6.5□□□□□ -1.37
MIR548B-201ENST00000385247 SPDYE2Q495Y8 402 aa6.5□□□□□ -1.37
MIR548B-201ENST00000385247 SPDYE4A6NLX3 237 aa6.48□□□□□ -1.37
MIR548B-201ENST00000385247 ZNF692Q9BU19 519 aaPredicted RBP6.48□□□□□ -1.37
MIR548B-201ENST00000385247 FKBP8Q14318 412 aa6.47□□□□□ -1.37
MIR548B-201ENST00000385247 AKT1S1Q96B36 256 aa6.43□□□□□ -1.38
MIR548B-201ENST00000385247 SSUH2Q9Y2M2 353 aa6.4□□□□□ -1.38
MIR548B-201ENST00000385247 PABPN1Q86U42 306 aaKnown RBP eCLIP6.38□□□□□ -1.39
MIR548B-201ENST00000385247 REM2Q8IYK8 340 aaPredicted RBP6.35□□□□□ -1.39
MIR548B-201ENST00000385247 SPDYE1Q8NFV5 336 aaPredicted RBP6.32□□□□□ -1.4
MIR548B-201ENST00000385247 STAG3Q9UJ98 1225 aa6.32□□□□□ -1.4
MIR548B-201ENST00000385247 PROM2Q8N271 834 aa6.31□□□□□ -1.4
MIR548B-201ENST00000385247 CLEC11AQ9Y240 323 aa6.31□□□□□ -1.4
MIR548B-201ENST00000385247 FBXO3Q9UK99 471 aa6.28□□□□□ -1.4
MIR548B-201ENST00000385247 PITPNM1O00562 1244 aa6.25□□□□□ -1.41
MIR548B-201ENST00000385247 PRR29P0C7W0 189 aa6.25□□□□□ -1.41
MIR548B-201ENST00000385247 CHRDL2Q6WN34 429 aa6.22□□□□□ -1.41
MIR548B-201ENST00000385247 PLEKHG5O94827 1062 aa6.18□□□□□ -1.42
MIR548B-201ENST00000385247 MIER1Q8N108 512 aa6.18□□□□□ -1.42
MIR548B-201ENST00000385247 PLCD3Q8N3E9 789 aa6.17□□□□□ -1.42
MIR548B-201ENST00000385247 VASPP50552 380 aaPredicted RBP6.15□□□□□ -1.42
MIR548B-201ENST00000385247 FXR2P51116 673 aaKnown RBP eCLIP6.15□□□□□ -1.42
MIR548B-201ENST00000385247 PRKAR2AP13861 404 aaKnown RBP6.13□□□□□ -1.43
MIR548B-201ENST00000385247 PIP4P2Q8N4L2 257 aa6.13□□□□□ -1.43
MIR548B-201ENST00000385247 CHADLQ6NUI6 762 aa6.11□□□□□ -1.43
MIR548B-201ENST00000385247 KLHL34Q8N239 644 aa6.11□□□□□ -1.43
MIR548B-201ENST00000385247 CREBZFQ9NS37 354 aa6.11□□□□□ -1.43
MIR548B-201ENST00000385247 ZBTB47Q9UFB7 747 aaPredicted RBP6.11□□□□□ -1.43
MIR548B-201ENST00000385247 NPM1P06748 294 aaKnown RBP eCLIP6.08□□□□□ -1.44
MIR548B-201ENST00000385247 FARP1Q9Y4F1 1045 aaPredicted RBP6.06□□□□□ -1.44
MIR548B-201ENST00000385247 POTEHQ6S545 545 aa6.05□□□□□ -1.44
MIR548B-201ENST00000385247 IFNLR1Q8IU57 520 aaPredicted RBP6.04□□□□□ -1.44
MIR548B-201ENST00000385247 SPOCK2Q92563 424 aa6.02□□□□□ -1.45
MIR548B-201ENST00000385247 MNX1P50219 401 aaPredicted RBP6.01□□□□□ -1.45
MIR548B-201ENST00000385247 HAX1O00165 279 aa5.99□□□□□ -1.45
MIR548B-201ENST00000385247 PAK3O75914 559 aaPredicted RBP5.98□□□□□ -1.45
MIR548B-201ENST00000385247 DCAF8Q5TAQ9 597 aa5.97□□□□□ -1.45
MIR548B-201ENST00000385247 NUBP1P53384 320 aa5.96□□□□□ -1.46
MIR548B-201ENST00000385247 CD44P16070 742 aaKnown RBP5.95□□□□□ -1.46
MIR548B-201ENST00000385247 GSE1Q14687 1217 aa5.95□□□□□ -1.46
MIR548B-201ENST00000385247 FAM212AQ96EL1 285 aa5.95□□□□□ -1.46
MIR548B-201ENST00000385247 TSPYL2Q9H2G4 693 aaPredicted RBP5.95□□□□□ -1.46
MIR548B-201ENST00000385247 CIZ1Q9ULV3 898 aaPredicted RBP5.95□□□□□ -1.46
MIR548B-201ENST00000385247 C19orf67A6NJJ6 358 aa5.94□□□□□ -1.46
MIR548B-201ENST00000385247 RASEFQ8IZ41 740 aa5.93□□□□□ -1.46
MIR548B-201ENST00000385247 ZRANB1Q9UGI0 708 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms