RNA–Protein interactions for RNA: ENST00000385041.1

MIR548A1-201, Transcript of microRNA 548a-1, humanhuman

BASIC

Gene MIR548A1, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A1-201ENST00000385041 AEBP2Q6ZN18 517 aaPredicted RBP14.21□□□□□ -0.13
MIR548A1-201ENST00000385041 CHIC1Q5VXU3 224 aa13.4□□□□□ -0.26
MIR548A1-201ENST00000385041 SENP3Q9H4L4 574 aaPredicted RBP12.31□□□□□ -0.44
MIR548A1-201ENST00000385041 PHF23Q9BUL5 403 aaPredicted RBP12.03□□□□□ -0.48
MIR548A1-201ENST00000385041 FOXD1Q16676 465 aa11.45□□□□□ -0.58
MIR548A1-201ENST00000385041 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
MIR548A1-201ENST00000385041 MSH5O43196 834 aa11□□□□□ -0.65
MIR548A1-201ENST00000385041 PIAS4Q8N2W9 510 aaPredicted RBP10.6□□□□□ -0.71
MIR548A1-201ENST00000385041 PLPPR3Q6T4P5 718 aa10.32□□□□□ -0.76
MIR548A1-201ENST00000385041 PPP6R1Q9UPN7 881 aa10.31□□□□□ -0.76
MIR548A1-201ENST00000385041 ADRA2BP18089 450 aa10.25□□□□□ -0.77
MIR548A1-201ENST00000385041 DMRT2Q9Y5R5 561 aa9.67□□□□□ -0.86
MIR548A1-201ENST00000385041 CACNB1Q02641 598 aaPredicted RBP9.66□□□□□ -0.86
MIR548A1-201ENST00000385041 SCAF1Q9H7N4 1312 aaKnown RBP9.54□□□□□ -0.88
MIR548A1-201ENST00000385041 MAPK8IP2Q13387 824 aaPredicted RBP9.53□□□□□ -0.88
MIR548A1-201ENST00000385041 RNF39Q9H2S5 420 aa9.29□□□□□ -0.92
MIR548A1-201ENST00000385041 DCAF8L1A6NGE4 600 aa9.22□□□□□ -0.93
MIR548A1-201ENST00000385041 C1QBPQ07021 282 aaKnown RBP9.19□□□□□ -0.94
MIR548A1-201ENST00000385041 HOXD11P31277 338 aaPredicted RBP9.14□□□□□ -0.95
MIR548A1-201ENST00000385041 DNAJC5BQ9UF47 199 aa9.04□□□□□ -0.96
MIR548A1-201ENST00000385041 RNF216Q9NWF9 866 aaPredicted RBP8.97□□□□□ -0.97
MIR548A1-201ENST00000385041 PPP4R3CPQ6ZMV5 832 aa8.93□□□□□ -0.98
MIR548A1-201ENST00000385041 CNKSR2Q8WXI2 1034 aa8.93□□□□□ -0.98
MIR548A1-201ENST00000385041 POTEHQ6S545 545 aa8.9□□□□□ -0.98
MIR548A1-201ENST00000385041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.68□□□□□ -1.02
MIR548A1-201ENST00000385041 DSG3P32926 999 aa8.54□□□□□ -1.04
MIR548A1-201ENST00000385041 NCBP3Q53F19 620 aaKnown RBP8.52□□□□□ -1.05
MIR548A1-201ENST00000385041 CAPN15O75808 1086 aa8.45□□□□□ -1.06
MIR548A1-201ENST00000385041 U3KPZ7 1027 aaPredicted RBP8.42□□□□□ -1.06
MIR548A1-201ENST00000385041 SPINK5Q9NQ38 1064 aaPredicted RBP8.4□□□□□ -1.06
MIR548A1-201ENST00000385041 NPM3O75607 178 aaKnown RBP8.31□□□□□ -1.08
MIR548A1-201ENST00000385041 APLP2Q06481 763 aa8.29□□□□□ -1.08
MIR548A1-201ENST00000385041 ZNF219Q9P2Y4 722 aaPredicted RBP8.25□□□□□ -1.09
MIR548A1-201ENST00000385041 RBM42Q9BTD8 480 aaKnown RBP8.24□□□□□ -1.09
MIR548A1-201ENST00000385041 TRHP20396 242 aaPredicted RBP8.19□□□□□ -1.1
MIR548A1-201ENST00000385041 CHRDL2Q6WN34 429 aa8.16□□□□□ -1.1
MIR548A1-201ENST00000385041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.15□□□□□ -1.1
MIR548A1-201ENST00000385041 ABCB7O75027 752 aa8.15□□□□□ -1.1
MIR548A1-201ENST00000385041 HNRNPUL2Q1KMD3 747 aaKnown RBP8.15□□□□□ -1.1
MIR548A1-201ENST00000385041 SP7Q8TDD2 431 aaPredicted RBP8.13□□□□□ -1.11
MIR548A1-201ENST00000385041 SAMD1Q6SPF0 538 aaPredicted RBP8.04□□□□□ -1.12
MIR548A1-201ENST00000385041 SLC4A2P04920 1241 aa8.03□□□□□ -1.12
MIR548A1-201ENST00000385041 AKT1S1Q96B36 256 aa7.93□□□□□ -1.14
MIR548A1-201ENST00000385041 POLA2Q14181 598 aa7.89□□□□□ -1.15
MIR548A1-201ENST00000385041 HAX1O00165 279 aa7.85□□□□□ -1.15
MIR548A1-201ENST00000385041 PIP4P2Q8N4L2 257 aa7.85□□□□□ -1.15
MIR548A1-201ENST00000385041 REM2Q8IYK8 340 aaPredicted RBP7.8□□□□□ -1.16
MIR548A1-201ENST00000385041 ZBTB12Q9Y330 459 aaPredicted RBP7.79□□□□□ -1.16
MIR548A1-201ENST00000385041 FXR2P51116 673 aaKnown RBP eCLIP7.77□□□□□ -1.17
MIR548A1-201ENST00000385041 MYCNP04198 464 aaPredicted RBP7.75□□□□□ -1.17
MIR548A1-201ENST00000385041 PITPNM1O00562 1244 aa7.69□□□□□ -1.18
MIR548A1-201ENST00000385041 KCNA4P22459 653 aa7.69□□□□□ -1.18
MIR548A1-201ENST00000385041 EVX2Q03828 476 aa7.64□□□□□ -1.19
MIR548A1-201ENST00000385041 LHX8Q68G74 356 aa7.61□□□□□ -1.19
MIR548A1-201ENST00000385041 OSCARQ8IYS5 282 aa7.61□□□□□ -1.19
MIR548A1-201ENST00000385041 C19orf67A6NJJ6 358 aa7.53□□□□□ -1.2
MIR548A1-201ENST00000385041 GABBR2O75899 941 aa7.51□□□□□ -1.21
MIR548A1-201ENST00000385041 PRKAR2AP13861 404 aaKnown RBP7.5□□□□□ -1.21
MIR548A1-201ENST00000385041 ATF5Q9Y2D1 282 aaPredicted RBP7.49□□□□□ -1.21
MIR548A1-201ENST00000385041 SPDYE2BA6NHP3 402 aa7.47□□□□□ -1.21
MIR548A1-201ENST00000385041 SPDYE6P0CI01 402 aa7.47□□□□□ -1.21
MIR548A1-201ENST00000385041 SPDYE2Q495Y8 402 aa7.47□□□□□ -1.21
MIR548A1-201ENST00000385041 PLSCR2Q9NRY7 297 aa7.46□□□□□ -1.22
MIR548A1-201ENST00000385041 SPDYE1Q8NFV5 336 aaPredicted RBP7.45□□□□□ -1.22
MIR548A1-201ENST00000385041 CLCN6P51797 869 aa7.42□□□□□ -1.22
MIR548A1-201ENST00000385041 CLEC11AQ9Y240 323 aa7.4□□□□□ -1.22
MIR548A1-201ENST00000385041 FOXD4L1Q9NU39 408 aa7.39□□□□□ -1.23
MIR548A1-201ENST00000385041 FBLN2P98095 1184 aa7.36□□□□□ -1.23
MIR548A1-201ENST00000385041 POTEIP0CG38 1075 aa7.31□□□□□ -1.24
MIR548A1-201ENST00000385041 ATXN8OSP0DMR3 200 aa7.29□□□□□ -1.24
MIR548A1-201ENST00000385041 ZNF692Q9BU19 519 aaPredicted RBP7.28□□□□□ -1.24
MIR548A1-201ENST00000385041 SSUH2Q9Y2M2 353 aa7.28□□□□□ -1.24
MIR548A1-201ENST00000385041 PRR29P0C7W0 189 aa7.26□□□□□ -1.25
MIR548A1-201ENST00000385041 CHADLQ6NUI6 762 aa7.26□□□□□ -1.25
MIR548A1-201ENST00000385041 CD44P16070 742 aaKnown RBP7.24□□□□□ -1.25
MIR548A1-201ENST00000385041 DCBLD2Q96PD2 775 aa7.24□□□□□ -1.25
MIR548A1-201ENST00000385041 PCDH10Q9P2E7 1040 aa7.23□□□□□ -1.25
MIR548A1-201ENST00000385041 SLC4A1APQ9BWU0 796 aaKnown RBP7.21□□□□□ -1.26
MIR548A1-201ENST00000385041 POTEMA6NI47 508 aa7.18□□□□□ -1.26
MIR548A1-201ENST00000385041 FARP1Q9Y4F1 1045 aaPredicted RBP7.17□□□□□ -1.26
MIR548A1-201ENST00000385041 OTUD5Q96G74 571 aa7.15□□□□□ -1.26
MIR548A1-201ENST00000385041 MKRN4PQ13434 485 aaPredicted RBP7.14□□□□□ -1.27
MIR548A1-201ENST00000385041 POTEGQ6S5H5 508 aa7.13□□□□□ -1.27
MIR548A1-201ENST00000385041 ZNF579Q8NAF0 562 aaKnown RBP7.13□□□□□ -1.27
MIR548A1-201ENST00000385041 PABPN1Q86U42 306 aaKnown RBP eCLIP7.12□□□□□ -1.27
MIR548A1-201ENST00000385041 ZRANB1Q9UGI0 708 aa7.06□□□□□ -1.28
MIR548A1-201ENST00000385041 POTEB2H3BUK9 544 aa7.05□□□□□ -1.28
MIR548A1-201ENST00000385041 ZBTB22O15209 634 aa7.02□□□□□ -1.29
MIR548A1-201ENST00000385041 GALR2O43603 387 aaPredicted RBP7.02□□□□□ -1.29
MIR548A1-201ENST00000385041 MAMSTRQ6ZN01 415 aa6.99□□□□□ -1.29
MIR548A1-201ENST00000385041 PAK3O75914 559 aaPredicted RBP6.98□□□□□ -1.29
MIR548A1-201ENST00000385041 C7P10643 843 aa6.94□□□□□ -1.3
MIR548A1-201ENST00000385041 SLC39A7Q92504 469 aa6.93□□□□□ -1.3
MIR548A1-201ENST00000385041 STAG3Q9UJ98 1225 aa6.93□□□□□ -1.3
MIR548A1-201ENST00000385041 CREBZFQ9NS37 354 aa6.92□□□□□ -1.3
MIR548A1-201ENST00000385041 ASTLQ6HA08 431 aaPredicted RBP6.91□□□□□ -1.3
MIR548A1-201ENST00000385041 PELP1Q8IZL8 1130 aaKnown RBP6.91□□□□□ -1.3
MIR548A1-201ENST00000385041 METRNQ9UJH8 293 aa6.9□□□□□ -1.3
MIR548A1-201ENST00000385041 SCUBE2Q9NQ36 999 aa6.89□□□□□ -1.31
MIR548A1-201ENST00000385041 LCE2DQ5TA82 110 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms