RNA–Protein interactions for RNA: ENST00000384625.1

RNU6-1257P-201, Transcript of RNA, U6 small nuclear 1257, pseudogene, humanhuman

BASIC

Gene RNU6-1257P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1257P-201ENST00000384625 AEBP2Q6ZN18 517 aaPredicted RBP26.73■■□□□ 1.87
RNU6-1257P-201ENST00000384625 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
RNU6-1257P-201ENST00000384625 PHF23Q9BUL5 403 aaPredicted RBP23.08■■□□□ 1.29
RNU6-1257P-201ENST00000384625 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
RNU6-1257P-201ENST00000384625 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
RNU6-1257P-201ENST00000384625 FOXD1Q16676 465 aa20.98■□□□□ 0.95
RNU6-1257P-201ENST00000384625 PPP6R1Q9UPN7 881 aa20.38■□□□□ 0.85
RNU6-1257P-201ENST00000384625 ADRA2BP18089 450 aa20.37■□□□□ 0.85
RNU6-1257P-201ENST00000384625 PIAS4Q8N2W9 510 aaPredicted RBP19.78■□□□□ 0.76
RNU6-1257P-201ENST00000384625 MSH5O43196 834 aa19.09■□□□□ 0.65
RNU6-1257P-201ENST00000384625 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
RNU6-1257P-201ENST00000384625 KCNA4P22459 653 aa18.57■□□□□ 0.56
RNU6-1257P-201ENST00000384625 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
RNU6-1257P-201ENST00000384625 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
RNU6-1257P-201ENST00000384625 NCBP3Q53F19 620 aaKnown RBP18.17■□□□□ 0.5
RNU6-1257P-201ENST00000384625 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
RNU6-1257P-201ENST00000384625 NPM3O75607 178 aaKnown RBP18.06■□□□□ 0.48
RNU6-1257P-201ENST00000384625 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
RNU6-1257P-201ENST00000384625 RNF216Q9NWF9 866 aaPredicted RBP17.72■□□□□ 0.43
RNU6-1257P-201ENST00000384625 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
RNU6-1257P-201ENST00000384625 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
RNU6-1257P-201ENST00000384625 EHMT2Q96KQ7 1210 aa17.43■□□□□ 0.38
RNU6-1257P-201ENST00000384625 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
RNU6-1257P-201ENST00000384625 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
RNU6-1257P-201ENST00000384625 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
RNU6-1257P-201ENST00000384625 ZBTB22O15209 634 aa17.12■□□□□ 0.33
RNU6-1257P-201ENST00000384625 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
RNU6-1257P-201ENST00000384625 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
RNU6-1257P-201ENST00000384625 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
RNU6-1257P-201ENST00000384625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.89■□□□□ 0.29
RNU6-1257P-201ENST00000384625 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
RNU6-1257P-201ENST00000384625 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
RNU6-1257P-201ENST00000384625 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
RNU6-1257P-201ENST00000384625 ATF5Q9Y2D1 282 aaPredicted RBP16.36■□□□□ 0.21
RNU6-1257P-201ENST00000384625 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
RNU6-1257P-201ENST00000384625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.24■□□□□ 0.19
RNU6-1257P-201ENST00000384625 HNRNPUL2Q1KMD3 747 aaKnown RBP16.24■□□□□ 0.19
RNU6-1257P-201ENST00000384625 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
RNU6-1257P-201ENST00000384625 C1QBPQ07021 282 aaKnown RBP16.19■□□□□ 0.18
RNU6-1257P-201ENST00000384625 ATXN8OSP0DMR3 200 aa16.17■□□□□ 0.18
RNU6-1257P-201ENST00000384625 CAPN15O75808 1086 aa16.1■□□□□ 0.17
RNU6-1257P-201ENST00000384625 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
RNU6-1257P-201ENST00000384625 CACNB1Q02641 598 aaPredicted RBP16.01■□□□□ 0.15
RNU6-1257P-201ENST00000384625 APLP2Q06481 763 aa16■□□□□ 0.15
RNU6-1257P-201ENST00000384625 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
RNU6-1257P-201ENST00000384625 ABCB7O75027 752 aa15.9■□□□□ 0.14
RNU6-1257P-201ENST00000384625 POLA2Q14181 598 aa15.83■□□□□ 0.12
RNU6-1257P-201ENST00000384625 DSG3P32926 999 aa15.75■□□□□ 0.11
RNU6-1257P-201ENST00000384625 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
RNU6-1257P-201ENST00000384625 FBLN2P98095 1184 aa15.44■□□□□ 0.06
RNU6-1257P-201ENST00000384625 FKBP8Q14318 412 aa15.44■□□□□ 0.06
RNU6-1257P-201ENST00000384625 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
RNU6-1257P-201ENST00000384625 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
RNU6-1257P-201ENST00000384625 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
RNU6-1257P-201ENST00000384625 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
RNU6-1257P-201ENST00000384625 SPDYE2BA6NHP3 402 aa15.01□□□□□ -0.01
RNU6-1257P-201ENST00000384625 SPDYE6P0CI01 402 aa15.01□□□□□ -0.01
RNU6-1257P-201ENST00000384625 SPDYE2Q495Y8 402 aa15.01□□□□□ -0.01
RNU6-1257P-201ENST00000384625 SSUH2Q9Y2M2 353 aa14.94□□□□□ -0.02
RNU6-1257P-201ENST00000384625 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
RNU6-1257P-201ENST00000384625 PROM2Q8N271 834 aa14.89□□□□□ -0.03
RNU6-1257P-201ENST00000384625 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
RNU6-1257P-201ENST00000384625 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
RNU6-1257P-201ENST00000384625 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
RNU6-1257P-201ENST00000384625 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
RNU6-1257P-201ENST00000384625 FBXO3Q9UK99 471 aa14.64□□□□□ -0.07
RNU6-1257P-201ENST00000384625 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
RNU6-1257P-201ENST00000384625 VASPP50552 380 aaPredicted RBP14.57□□□□□ -0.08
RNU6-1257P-201ENST00000384625 SPDYE1Q8NFV5 336 aaPredicted RBP14.55□□□□□ -0.08
RNU6-1257P-201ENST00000384625 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
RNU6-1257P-201ENST00000384625 MIER1Q8N108 512 aa14.47□□□□□ -0.09
RNU6-1257P-201ENST00000384625 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
RNU6-1257P-201ENST00000384625 IFNLR1Q8IU57 520 aaPredicted RBP14.44□□□□□ -0.1
RNU6-1257P-201ENST00000384625 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
RNU6-1257P-201ENST00000384625 CHADLQ6NUI6 762 aa14.35□□□□□ -0.11
RNU6-1257P-201ENST00000384625 KLHL34Q8N239 644 aa14.35□□□□□ -0.11
RNU6-1257P-201ENST00000384625 CREBZFQ9NS37 354 aa14.33□□□□□ -0.12
RNU6-1257P-201ENST00000384625 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
RNU6-1257P-201ENST00000384625 RTN4Q9NQC3 1192 aaKnown RBP14.31□□□□□ -0.12
RNU6-1257P-201ENST00000384625 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
RNU6-1257P-201ENST00000384625 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
RNU6-1257P-201ENST00000384625 FXR2P51116 673 aaKnown RBP eCLIP14.2□□□□□ -0.14
RNU6-1257P-201ENST00000384625 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
RNU6-1257P-201ENST00000384625 MNX1P50219 401 aaPredicted RBP14.17□□□□□ -0.14
RNU6-1257P-201ENST00000384625 SPOCK2Q92563 424 aa14.17□□□□□ -0.14
RNU6-1257P-201ENST00000384625 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
RNU6-1257P-201ENST00000384625 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
RNU6-1257P-201ENST00000384625 NUBP1P53384 320 aa14.05□□□□□ -0.16
RNU6-1257P-201ENST00000384625 ZBTB47Q9UFB7 747 aaPredicted RBP14.05□□□□□ -0.16
RNU6-1257P-201ENST00000384625 CIZ1Q9ULV3 898 aaPredicted RBP14.04□□□□□ -0.16
RNU6-1257P-201ENST00000384625 RASEFQ8IZ41 740 aa14.02□□□□□ -0.17
RNU6-1257P-201ENST00000384625 PKD2Q13563 968 aa14□□□□□ -0.17
RNU6-1257P-201ENST00000384625 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
RNU6-1257P-201ENST00000384625 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
RNU6-1257P-201ENST00000384625 TSPYL2Q9H2G4 693 aaPredicted RBP13.95□□□□□ -0.18
RNU6-1257P-201ENST00000384625 ECM2O94769 699 aaPredicted RBP13.88□□□□□ -0.19
RNU6-1257P-201ENST00000384625 FAM212AQ96EL1 285 aa13.86□□□□□ -0.19
RNU6-1257P-201ENST00000384625 GSE1Q14687 1217 aa13.82□□□□□ -0.2
RNU6-1257P-201ENST00000384625 PYGBP11216 843 aa13.81□□□□□ -0.2
RNU6-1257P-201ENST00000384625 RGL2O15211 777 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms