RNA–Protein interactions for RNA: ENST00000384415.1

RNU6-1297P-201, Transcript of RNA, U6 small nuclear 1297, pseudogene, humanhuman

BASIC

Gene RNU6-1297P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1297P-201ENST00000384415 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
RNU6-1297P-201ENST00000384415 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
RNU6-1297P-201ENST00000384415 SENP3Q9H4L4 574 aaPredicted RBP17.48■□□□□ 0.39
RNU6-1297P-201ENST00000384415 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
RNU6-1297P-201ENST00000384415 FOXD1Q16676 465 aa16.3■□□□□ 0.2
RNU6-1297P-201ENST00000384415 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
RNU6-1297P-201ENST00000384415 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
RNU6-1297P-201ENST00000384415 ADRA2BP18089 450 aa15.27■□□□□ 0.04
RNU6-1297P-201ENST00000384415 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
RNU6-1297P-201ENST00000384415 MSH5O43196 834 aa15.18■□□□□ 0.02
RNU6-1297P-201ENST00000384415 POTEDQ86YR6 584 aa14.64□□□□□ -0.07
RNU6-1297P-201ENST00000384415 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
RNU6-1297P-201ENST00000384415 SCAF1Q9H7N4 1312 aaKnown RBP13.92□□□□□ -0.18
RNU6-1297P-201ENST00000384415 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
RNU6-1297P-201ENST00000384415 PPP4R3CPQ6ZMV5 832 aa13.78□□□□□ -0.2
RNU6-1297P-201ENST00000384415 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
RNU6-1297P-201ENST00000384415 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
RNU6-1297P-201ENST00000384415 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
RNU6-1297P-201ENST00000384415 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
RNU6-1297P-201ENST00000384415 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
RNU6-1297P-201ENST00000384415 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
RNU6-1297P-201ENST00000384415 RNF39Q9H2S5 420 aa13□□□□□ -0.33
RNU6-1297P-201ENST00000384415 KCNA4P22459 653 aa12.97□□□□□ -0.33
RNU6-1297P-201ENST00000384415 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
RNU6-1297P-201ENST00000384415 CACNB1Q02641 598 aaPredicted RBP12.93□□□□□ -0.34
RNU6-1297P-201ENST00000384415 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
RNU6-1297P-201ENST00000384415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.75□□□□□ -0.37
RNU6-1297P-201ENST00000384415 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
RNU6-1297P-201ENST00000384415 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
RNU6-1297P-201ENST00000384415 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
RNU6-1297P-201ENST00000384415 CAPN15O75808 1086 aa12.25□□□□□ -0.45
RNU6-1297P-201ENST00000384415 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
RNU6-1297P-201ENST00000384415 DSG3P32926 999 aa12.2□□□□□ -0.46
RNU6-1297P-201ENST00000384415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
RNU6-1297P-201ENST00000384415 HNRNPUL2Q1KMD3 747 aaKnown RBP12.18□□□□□ -0.46
RNU6-1297P-201ENST00000384415 APLP2Q06481 763 aa12.14□□□□□ -0.47
RNU6-1297P-201ENST00000384415 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
RNU6-1297P-201ENST00000384415 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
RNU6-1297P-201ENST00000384415 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
RNU6-1297P-201ENST00000384415 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
RNU6-1297P-201ENST00000384415 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
RNU6-1297P-201ENST00000384415 ABCB7O75027 752 aa12□□□□□ -0.49
RNU6-1297P-201ENST00000384415 ZBTB22O15209 634 aa11.97□□□□□ -0.49
RNU6-1297P-201ENST00000384415 ATF5Q9Y2D1 282 aaPredicted RBP11.85□□□□□ -0.51
RNU6-1297P-201ENST00000384415 POLA2Q14181 598 aa11.79□□□□□ -0.52
RNU6-1297P-201ENST00000384415 ATXN8OSP0DMR3 200 aa11.68□□□□□ -0.54
RNU6-1297P-201ENST00000384415 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
RNU6-1297P-201ENST00000384415 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
RNU6-1297P-201ENST00000384415 POTEHQ6S545 545 aa11.48□□□□□ -0.57
RNU6-1297P-201ENST00000384415 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
RNU6-1297P-201ENST00000384415 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
RNU6-1297P-201ENST00000384415 AKT1S1Q96B36 256 aa11.38□□□□□ -0.59
RNU6-1297P-201ENST00000384415 EHMT2Q96KQ7 1210 aa11.36□□□□□ -0.59
RNU6-1297P-201ENST00000384415 FBLN2P98095 1184 aa11.32□□□□□ -0.6
RNU6-1297P-201ENST00000384415 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
RNU6-1297P-201ENST00000384415 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
RNU6-1297P-201ENST00000384415 REM2Q8IYK8 340 aaPredicted RBP11.27□□□□□ -0.61
RNU6-1297P-201ENST00000384415 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
RNU6-1297P-201ENST00000384415 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
RNU6-1297P-201ENST00000384415 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
RNU6-1297P-201ENST00000384415 PITPNM1O00562 1244 aa11.17□□□□□ -0.62
RNU6-1297P-201ENST00000384415 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
RNU6-1297P-201ENST00000384415 PIP4P2Q8N4L2 257 aa11.09□□□□□ -0.63
RNU6-1297P-201ENST00000384415 ZNF692Q9BU19 519 aaPredicted RBP11.09□□□□□ -0.63
RNU6-1297P-201ENST00000384415 FXR2P51116 673 aaKnown RBP eCLIP11.05□□□□□ -0.64
RNU6-1297P-201ENST00000384415 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
RNU6-1297P-201ENST00000384415 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
RNU6-1297P-201ENST00000384415 CLEC11AQ9Y240 323 aa10.94□□□□□ -0.66
RNU6-1297P-201ENST00000384415 PRKAR2AP13861 404 aaKnown RBP10.85□□□□□ -0.67
RNU6-1297P-201ENST00000384415 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
RNU6-1297P-201ENST00000384415 SPDYE4A6NLX3 237 aa10.8□□□□□ -0.68
RNU6-1297P-201ENST00000384415 HAX1O00165 279 aa10.8□□□□□ -0.68
RNU6-1297P-201ENST00000384415 PRR29P0C7W0 189 aa10.78□□□□□ -0.68
RNU6-1297P-201ENST00000384415 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
RNU6-1297P-201ENST00000384415 EVX2Q03828 476 aa10.73□□□□□ -0.69
RNU6-1297P-201ENST00000384415 C19orf67A6NJJ6 358 aa10.69□□□□□ -0.7
RNU6-1297P-201ENST00000384415 STAG3Q9UJ98 1225 aa10.65□□□□□ -0.7
RNU6-1297P-201ENST00000384415 PROM2Q8N271 834 aa10.64□□□□□ -0.71
RNU6-1297P-201ENST00000384415 FARP1Q9Y4F1 1045 aaPredicted RBP10.62□□□□□ -0.71
RNU6-1297P-201ENST00000384415 CREBZFQ9NS37 354 aa10.6□□□□□ -0.71
RNU6-1297P-201ENST00000384415 CD44P16070 742 aaKnown RBP10.52□□□□□ -0.73
RNU6-1297P-201ENST00000384415 GABBR2O75899 941 aa10.48□□□□□ -0.73
RNU6-1297P-201ENST00000384415 MNX1P50219 401 aaPredicted RBP10.46□□□□□ -0.73
RNU6-1297P-201ENST00000384415 ZNF579Q8NAF0 562 aaKnown RBP10.39□□□□□ -0.75
RNU6-1297P-201ENST00000384415 FKBP8Q14318 412 aa10.37□□□□□ -0.75
RNU6-1297P-201ENST00000384415 ZRANB1Q9UGI0 708 aa10.37□□□□□ -0.75
RNU6-1297P-201ENST00000384415 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
RNU6-1297P-201ENST00000384415 CLCN6P51797 869 aa10.34□□□□□ -0.75
RNU6-1297P-201ENST00000384415 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
RNU6-1297P-201ENST00000384415 POTEIP0CG38 1075 aa10.29□□□□□ -0.76
RNU6-1297P-201ENST00000384415 PHF12Q96QT6 1004 aa10.27□□□□□ -0.77
RNU6-1297P-201ENST00000384415 GALR2O43603 387 aaPredicted RBP10.24□□□□□ -0.77
RNU6-1297P-201ENST00000384415 MIER1Q8N108 512 aa10.24□□□□□ -0.77
RNU6-1297P-201ENST00000384415 PLEKHG5O94827 1062 aa10.21□□□□□ -0.77
RNU6-1297P-201ENST00000384415 PLCD3Q8N3E9 789 aa10.19□□□□□ -0.78
RNU6-1297P-201ENST00000384415 DCBLD2Q96PD2 775 aa10.18□□□□□ -0.78
RNU6-1297P-201ENST00000384415 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
RNU6-1297P-201ENST00000384415 TSPYL2Q9H2G4 693 aaPredicted RBP10.17□□□□□ -0.78
RNU6-1297P-201ENST00000384415 RASEFQ8IZ41 740 aa10.16□□□□□ -0.78
RNU6-1297P-201ENST00000384415 MS4A3Q96HJ5 214 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms