RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 DNAJC5Q9H3Z4 198 aa4.88□□□□□ -1.63
RNU6-42P-201ENST00000384165 DNAJC5BQ9UF47 199 aa4.51□□□□□ -1.69
RNU6-42P-201ENST00000384165 AEBP2Q6ZN18 517 aaPredicted RBP4.48□□□□□ -1.69
RNU6-42P-201ENST00000384165 ILDR1Q86SU0 546 aaPredicted RBP4.4□□□□□ -1.71
RNU6-42P-201ENST00000384165 TRIM41Q8WV44 630 aa4.35□□□□□ -1.71
RNU6-42P-201ENST00000384165 SOCS7O14512 581 aa4.14□□□□□ -1.75
RNU6-42P-201ENST00000384165 LMTK3Q96Q04 1460 aa4.03□□□□□ -1.76
RNU6-42P-201ENST00000384165 ILDR2Q71H61 639 aa3.94□□□□□ -1.78
RNU6-42P-201ENST00000384165 FBXO41Q8TF61 875 aa3.89□□□□□ -1.79
RNU6-42P-201ENST00000384165 ABCC9O60706 1549 aa3.88□□□□□ -1.79
RNU6-42P-201ENST00000384165 TRHP20396 242 aaPredicted RBP3.87□□□□□ -1.79
RNU6-42P-201ENST00000384165 PABPN1Q86U42 306 aaKnown RBP eCLIP3.87□□□□□ -1.79
RNU6-42P-201ENST00000384165 DISP3Q9P2K9 1392 aa3.86□□□□□ -1.79
RNU6-42P-201ENST00000384165 IFFO2Q5TF58 517 aa3.77□□□□□ -1.81
RNU6-42P-201ENST00000384165 CUX2O14529 1486 aa3.68□□□□□ -1.82
RNU6-42P-201ENST00000384165 CECR2Q9BXF3 1484 aa3.6□□□□□ -1.83
RNU6-42P-201ENST00000384165 PCDH10Q9P2E7 1040 aa3.59□□□□□ -1.83
RNU6-42P-201ENST00000384165 OSCARQ8IYS5 282 aa3.58□□□□□ -1.84
RNU6-42P-201ENST00000384165 CYB5RLQ6IPT4 315 aa3.56□□□□□ -1.84
RNU6-42P-201ENST00000384165 KDM4FA0A1W2PPD8 638 aa3.54□□□□□ -1.84
RNU6-42P-201ENST00000384165 ERCC6L2Q5T890 1561 aa3.54□□□□□ -1.84
RNU6-42P-201ENST00000384165 SLC34A2O95436 690 aa3.49□□□□□ -1.85
RNU6-42P-201ENST00000384165 ERCC6Q03468 1493 aa3.47□□□□□ -1.85
RNU6-42P-201ENST00000384165 SPATA31D1Q6ZQQ2 1576 aa3.46□□□□□ -1.85
RNU6-42P-201ENST00000384165 SYNJ2O15056 1496 aa3.45□□□□□ -1.86
RNU6-42P-201ENST00000384165 CERKQ8TCT0 537 aa3.41□□□□□ -1.86
RNU6-42P-201ENST00000384165 HECW2Q9P2P5 1572 aa3.39□□□□□ -1.87
RNU6-42P-201ENST00000384165 CC2D2AQ9P2K1 1620 aa3.37□□□□□ -1.87
RNU6-42P-201ENST00000384165 RIMBP3CA6NJZ7 1639 aa3.36□□□□□ -1.87
RNU6-42P-201ENST00000384165 RIMBP3BA6NNM3 1639 aa3.36□□□□□ -1.87
RNU6-42P-201ENST00000384165 RIMBP3Q9UFD9 1639 aa3.36□□□□□ -1.87
RNU6-42P-201ENST00000384165 PHF23Q9BUL5 403 aaPredicted RBP3.35□□□□□ -1.87
RNU6-42P-201ENST00000384165 NISCHQ9Y2I1 1504 aa3.3□□□□□ -1.88
RNU6-42P-201ENST00000384165 SENP3-EIF4A1A0A087X0R7 540 aa3.3□□□□□ -1.88
RNU6-42P-201ENST00000384165 PLPPR3Q6T4P5 718 aa3.3□□□□□ -1.88
RNU6-42P-201ENST00000384165 SRCAPQ6ZRS2 3230 aa3.29□□□□□ -1.88
RNU6-42P-201ENST00000384165 ARHGEF11O15085 1522 aa3.29□□□□□ -1.88
RNU6-42P-201ENST00000384165 RBM33Q96EV2 1170 aaKnown RBP3.28□□□□□ -1.88
RNU6-42P-201ENST00000384165 PPP6R1Q9UPN7 881 aa3.27□□□□□ -1.89
RNU6-42P-201ENST00000384165 CAPN15O75808 1086 aa3.25□□□□□ -1.89
RNU6-42P-201ENST00000384165 RB1CC1Q8TDY2 1594 aa3.23□□□□□ -1.89
RNU6-42P-201ENST00000384165 YY1P25490 414 aa3.22□□□□□ -1.89
RNU6-42P-201ENST00000384165 FOXD1Q16676 465 aa3.21□□□□□ -1.9
RNU6-42P-201ENST00000384165 BAZ1AQ9NRL2 1556 aaPredicted RBP3.21□□□□□ -1.9
RNU6-42P-201ENST00000384165 ADGRL1O94910 1474 aa3.19□□□□□ -1.9
RNU6-42P-201ENST00000384165 ARAP1Q96P48 1450 aa3.18□□□□□ -1.9
RNU6-42P-201ENST00000384165 PRELPP51888 382 aa3.16□□□□□ -1.9
RNU6-42P-201ENST00000384165 MPNDQ8N594 471 aa3.15□□□□□ -1.91
RNU6-42P-201ENST00000384165 UPF1Q92900 1129 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU6-42P-201ENST00000384165 ZRANB1Q9UGI0 708 aa3.15□□□□□ -1.91
RNU6-42P-201ENST00000384165 DCAF8L2P0C7V8 631 aa3.14□□□□□ -1.91
RNU6-42P-201ENST00000384165 C1QTNF8P60827 252 aa3.14□□□□□ -1.91
RNU6-42P-201ENST00000384165 UBAP1LF5GYI3 381 aa3.13□□□□□ -1.91
RNU6-42P-201ENST00000384165 EIF4G1Q04637 1599 aaKnown RBP3.12□□□□□ -1.91
RNU6-42P-201ENST00000384165 DMRT2Q9Y5R5 561 aa3.12□□□□□ -1.91
RNU6-42P-201ENST00000384165 FAM69CQ0P6D2 419 aa3.11□□□□□ -1.91
RNU6-42P-201ENST00000384165 IGSF5Q9NSI5 407 aa3.11□□□□□ -1.91
RNU6-42P-201ENST00000384165 SCAF1Q9H7N4 1312 aaKnown RBP3.1□□□□□ -1.91
RNU6-42P-201ENST00000384165 MED1Q15648 1581 aaPredicted RBP3.09□□□□□ -1.91
RNU6-42P-201ENST00000384165 HSPA1LP34931 641 aa3.09□□□□□ -1.91
RNU6-42P-201ENST00000384165 DCAF8L1A6NGE4 600 aa3.08□□□□□ -1.92
RNU6-42P-201ENST00000384165 HSPA2P54652 639 aa3.08□□□□□ -1.92
RNU6-42P-201ENST00000384165 TNS4Q8IZW8 715 aa3.08□□□□□ -1.92
RNU6-42P-201ENST00000384165 RGS17Q9UGC6 210 aaPredicted RBP3.07□□□□□ -1.92
RNU6-42P-201ENST00000384165 BICRAQ9NZM4 1560 aa3.07□□□□□ -1.92
RNU6-42P-201ENST00000384165 KDM6BO15054 1643 aa3.06□□□□□ -1.92
RNU6-42P-201ENST00000384165 FBLN2P98095 1184 aa3.06□□□□□ -1.92
RNU6-42P-201ENST00000384165 POTEAQ6S8J7 498 aa3.06□□□□□ -1.92
RNU6-42P-201ENST00000384165 LTBP4Q8N2S1 1624 aa3.05□□□□□ -1.92
RNU6-42P-201ENST00000384165 RSF1Q96T23 1441 aaPredicted RBP3.04□□□□□ -1.92
RNU6-42P-201ENST00000384165 PIP4K2BP78356 416 aa3.04□□□□□ -1.92
RNU6-42P-201ENST00000384165 THOC2Q8NI27 1593 aaKnown RBP3.04□□□□□ -1.92
RNU6-42P-201ENST00000384165 CEP350Q5VT06 3117 aa3.03□□□□□ -1.92
RNU6-42P-201ENST00000384165 NESP48681 1621 aa3.02□□□□□ -1.93
RNU6-42P-201ENST00000384165 COL13A1Q5TAT6 717 aaPredicted RBP3.02□□□□□ -1.93
RNU6-42P-201ENST00000384165 PTPRTO14522 1441 aa3.02□□□□□ -1.93
RNU6-42P-201ENST00000384165 TOP2BQ02880 1626 aa3.01□□□□□ -1.93
RNU6-42P-201ENST00000384165 PITPNM2Q9BZ72 1349 aa3.01□□□□□ -1.93
RNU6-42P-201ENST00000384165 NACADO15069 1562 aa3.01□□□□□ -1.93
RNU6-42P-201ENST00000384165 SMARCA2P51531 1590 aa3.01□□□□□ -1.93
RNU6-42P-201ENST00000384165 NPM1P06748 294 aaKnown RBP eCLIP3.01□□□□□ -1.93
RNU6-42P-201ENST00000384165 ZNF784Q8NCA9 323 aaPredicted RBP3.01□□□□□ -1.93
RNU6-42P-201ENST00000384165 DLL1O00548 723 aa3□□□□□ -1.93
RNU6-42P-201ENST00000384165 TOM1O60784 492 aa3□□□□□ -1.93
RNU6-42P-201ENST00000384165 CHMP7Q8WUX9 453 aaPredicted RBP3□□□□□ -1.93
RNU6-42P-201ENST00000384165 EHMT2Q96KQ7 1210 aa3□□□□□ -1.93
RNU6-42P-201ENST00000384165 PDS5BQ9NTI5 1447 aa2.99□□□□□ -1.93
RNU6-42P-201ENST00000384165 SHROOM4Q9ULL8 1493 aa2.98□□□□□ -1.93
RNU6-42P-201ENST00000384165 TRIM52Q96A61 297 aa2.98□□□□□ -1.93
RNU6-42P-201ENST00000384165 SENP3Q9H4L4 574 aaPredicted RBP2.98□□□□□ -1.93
RNU6-42P-201ENST00000384165 PCF11O94913 1555 aaKnown RBP2.97□□□□□ -1.93
RNU6-42P-201ENST00000384165 WWC3Q9ULE0 1092 aa2.97□□□□□ -1.93
RNU6-42P-201ENST00000384165 IQSEC2Q5JU85 1478 aa2.96□□□□□ -1.93
RNU6-42P-201ENST00000384165 CEP164Q9UPV0 1460 aa2.96□□□□□ -1.93
RNU6-42P-201ENST00000384165 GIGYF1O75420 1035 aaPredicted RBP2.96□□□□□ -1.94
RNU6-42P-201ENST00000384165 UNC13AQ9UPW8 1703 aa2.96□□□□□ -1.94
RNU6-42P-201ENST00000384165 FAM161AQ3B820 660 aa2.95□□□□□ -1.94
RNU6-42P-201ENST00000384165 COL26A1Q96A83 441 aa2.95□□□□□ -1.94
RNU6-42P-201ENST00000384165 MLLT1Q03111 559 aaPredicted RBP2.93□□□□□ -1.94
RNU6-42P-201ENST00000384165 CACNA1AO00555 2505 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms