RNA–Protein interactions for RNA: ENST00000383866.1

RNU6-47P-201, Transcript of RNA, U6 small nuclear 47, pseudogene, humanhuman

BASIC

Gene RNU6-47P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-47P-201ENST00000383866 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
RNU6-47P-201ENST00000383866 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
RNU6-47P-201ENST00000383866 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
RNU6-47P-201ENST00000383866 PHF23Q9BUL5 403 aaPredicted RBP14.55□□□□□ -0.08
RNU6-47P-201ENST00000383866 FOXD1Q16676 465 aa13.77□□□□□ -0.21
RNU6-47P-201ENST00000383866 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
RNU6-47P-201ENST00000383866 MSH5O43196 834 aa13.11□□□□□ -0.31
RNU6-47P-201ENST00000383866 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
RNU6-47P-201ENST00000383866 PLPPR3Q6T4P5 718 aa12.81□□□□□ -0.36
RNU6-47P-201ENST00000383866 PPP6R1Q9UPN7 881 aa12.61□□□□□ -0.39
RNU6-47P-201ENST00000383866 ADRA2BP18089 450 aa12.6□□□□□ -0.39
RNU6-47P-201ENST00000383866 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
RNU6-47P-201ENST00000383866 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
RNU6-47P-201ENST00000383866 MAPK8IP2Q13387 824 aaPredicted RBP11.63□□□□□ -0.55
RNU6-47P-201ENST00000383866 CACNB1Q02641 598 aaPredicted RBP11.42□□□□□ -0.58
RNU6-47P-201ENST00000383866 DCAF8L1A6NGE4 600 aa11.29□□□□□ -0.6
RNU6-47P-201ENST00000383866 PPP4R3CPQ6ZMV5 832 aa11.14□□□□□ -0.63
RNU6-47P-201ENST00000383866 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
RNU6-47P-201ENST00000383866 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
RNU6-47P-201ENST00000383866 CNKSR2Q8WXI2 1034 aa11.04□□□□□ -0.64
RNU6-47P-201ENST00000383866 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
RNU6-47P-201ENST00000383866 C1QBPQ07021 282 aaKnown RBP10.97□□□□□ -0.65
RNU6-47P-201ENST00000383866 DNAJC5BQ9UF47 199 aa10.85□□□□□ -0.67
RNU6-47P-201ENST00000383866 NCBP3Q53F19 620 aaKnown RBP10.73□□□□□ -0.69
RNU6-47P-201ENST00000383866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.68□□□□□ -0.7
RNU6-47P-201ENST00000383866 NPM3O75607 178 aaKnown RBP10.45□□□□□ -0.74
RNU6-47P-201ENST00000383866 CAPN15O75808 1086 aa10.35□□□□□ -0.75
RNU6-47P-201ENST00000383866 U3KPZ7 1027 aaPredicted RBP10.34□□□□□ -0.75
RNU6-47P-201ENST00000383866 POTEHQ6S545 545 aa10.31□□□□□ -0.76
RNU6-47P-201ENST00000383866 DSG3P32926 999 aa10.29□□□□□ -0.76
RNU6-47P-201ENST00000383866 SPINK5Q9NQ38 1064 aaPredicted RBP10.26□□□□□ -0.77
RNU6-47P-201ENST00000383866 APLP2Q06481 763 aa10.2□□□□□ -0.78
RNU6-47P-201ENST00000383866 ZNF219Q9P2Y4 722 aaPredicted RBP10.11□□□□□ -0.79
RNU6-47P-201ENST00000383866 TRHP20396 242 aaPredicted RBP10.1□□□□□ -0.79
RNU6-47P-201ENST00000383866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.09□□□□□ -0.79
RNU6-47P-201ENST00000383866 HNRNPUL2Q1KMD3 747 aaKnown RBP10.09□□□□□ -0.79
RNU6-47P-201ENST00000383866 ABCB7O75027 752 aa10.02□□□□□ -0.81
RNU6-47P-201ENST00000383866 SLC4A2P04920 1241 aa10.02□□□□□ -0.81
RNU6-47P-201ENST00000383866 KCNA4P22459 653 aa9.98□□□□□ -0.81
RNU6-47P-201ENST00000383866 SAMD1Q6SPF0 538 aaPredicted RBP9.98□□□□□ -0.81
RNU6-47P-201ENST00000383866 RBM42Q9BTD8 480 aaKnown RBP9.94□□□□□ -0.82
RNU6-47P-201ENST00000383866 CHRDL2Q6WN34 429 aa9.76□□□□□ -0.85
RNU6-47P-201ENST00000383866 POLA2Q14181 598 aa9.75□□□□□ -0.85
RNU6-47P-201ENST00000383866 MYCNP04198 464 aaPredicted RBP9.74□□□□□ -0.85
RNU6-47P-201ENST00000383866 ZBTB12Q9Y330 459 aaPredicted RBP9.61□□□□□ -0.87
RNU6-47P-201ENST00000383866 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
RNU6-47P-201ENST00000383866 SP7Q8TDD2 431 aaPredicted RBP9.55□□□□□ -0.88
RNU6-47P-201ENST00000383866 REM2Q8IYK8 340 aaPredicted RBP9.47□□□□□ -0.89
RNU6-47P-201ENST00000383866 FOXD4L1Q9NU39 408 aa9.47□□□□□ -0.89
RNU6-47P-201ENST00000383866 PIP4P2Q8N4L2 257 aa9.43□□□□□ -0.9
RNU6-47P-201ENST00000383866 SLC4A1APQ9BWU0 796 aaKnown RBP9.43□□□□□ -0.9
RNU6-47P-201ENST00000383866 OSCARQ8IYS5 282 aa9.42□□□□□ -0.9
RNU6-47P-201ENST00000383866 HAX1O00165 279 aa9.41□□□□□ -0.9
RNU6-47P-201ENST00000383866 ATF5Q9Y2D1 282 aaPredicted RBP9.41□□□□□ -0.9
RNU6-47P-201ENST00000383866 PITPNM1O00562 1244 aa9.36□□□□□ -0.91
RNU6-47P-201ENST00000383866 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.92
RNU6-47P-201ENST00000383866 SPDYE2BA6NHP3 402 aa9.24□□□□□ -0.93
RNU6-47P-201ENST00000383866 SPDYE6P0CI01 402 aa9.24□□□□□ -0.93
RNU6-47P-201ENST00000383866 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
RNU6-47P-201ENST00000383866 FBLN2P98095 1184 aa9.24□□□□□ -0.93
RNU6-47P-201ENST00000383866 SPDYE2Q495Y8 402 aa9.24□□□□□ -0.93
RNU6-47P-201ENST00000383866 SPDYE1Q8NFV5 336 aaPredicted RBP9.17□□□□□ -0.94
RNU6-47P-201ENST00000383866 PRKAR2AP13861 404 aaKnown RBP9.15□□□□□ -0.94
RNU6-47P-201ENST00000383866 CLEC11AQ9Y240 323 aa9.15□□□□□ -0.94
RNU6-47P-201ENST00000383866 EVX2Q03828 476 aa9.13□□□□□ -0.95
RNU6-47P-201ENST00000383866 ZBTB22O15209 634 aa9.11□□□□□ -0.95
RNU6-47P-201ENST00000383866 ZNF692Q9BU19 519 aaPredicted RBP9.09□□□□□ -0.95
RNU6-47P-201ENST00000383866 C19orf67A6NJJ6 358 aa9.05□□□□□ -0.96
RNU6-47P-201ENST00000383866 SSUH2Q9Y2M2 353 aa9.02□□□□□ -0.97
RNU6-47P-201ENST00000383866 GABBR2O75899 941 aa8.99□□□□□ -0.97
RNU6-47P-201ENST00000383866 MKRN4PQ13434 485 aaPredicted RBP8.98□□□□□ -0.97
RNU6-47P-201ENST00000383866 PRR29P0C7W0 189 aa8.97□□□□□ -0.97
RNU6-47P-201ENST00000383866 LHX8Q68G74 356 aa8.95□□□□□ -0.98
RNU6-47P-201ENST00000383866 CHADLQ6NUI6 762 aa8.94□□□□□ -0.98
RNU6-47P-201ENST00000383866 PABPN1Q86U42 306 aaKnown RBP eCLIP8.92□□□□□ -0.98
RNU6-47P-201ENST00000383866 CLCN6P51797 869 aa8.87□□□□□ -0.99
RNU6-47P-201ENST00000383866 CD44P16070 742 aaKnown RBP8.85□□□□□ -0.99
RNU6-47P-201ENST00000383866 FARP1Q9Y4F1 1045 aaPredicted RBP8.81□□□□□ -1
RNU6-47P-201ENST00000383866 DCBLD2Q96PD2 775 aa8.77□□□□□ -1.01
RNU6-47P-201ENST00000383866 POTEIP0CG38 1075 aa8.72□□□□□ -1.01
RNU6-47P-201ENST00000383866 STAG3Q9UJ98 1225 aa8.69□□□□□ -1.02
RNU6-47P-201ENST00000383866 ZNF579Q8NAF0 562 aaKnown RBP8.68□□□□□ -1.02
RNU6-47P-201ENST00000383866 ZRANB1Q9UGI0 708 aa8.68□□□□□ -1.02
RNU6-47P-201ENST00000383866 PLSCR2Q9NRY7 297 aa8.65□□□□□ -1.02
RNU6-47P-201ENST00000383866 PAK3O75914 559 aaPredicted RBP8.64□□□□□ -1.03
RNU6-47P-201ENST00000383866 CREBZFQ9NS37 354 aa8.59□□□□□ -1.03
RNU6-47P-201ENST00000383866 GALR2O43603 387 aaPredicted RBP8.56□□□□□ -1.04
RNU6-47P-201ENST00000383866 NPM1P06748 294 aaKnown RBP eCLIP8.56□□□□□ -1.04
RNU6-47P-201ENST00000383866 SPDYE4A6NLX3 237 aa8.51□□□□□ -1.05
RNU6-47P-201ENST00000383866 OTUD5Q96G74 571 aa8.5□□□□□ -1.05
RNU6-47P-201ENST00000383866 CSRNP3Q8WYN3 585 aa8.48□□□□□ -1.05
RNU6-47P-201ENST00000383866 PHF12Q96QT6 1004 aa8.48□□□□□ -1.05
RNU6-47P-201ENST00000383866 POTEMA6NI47 508 aa8.44□□□□□ -1.06
RNU6-47P-201ENST00000383866 POTEB2H3BUK9 544 aa8.43□□□□□ -1.06
RNU6-47P-201ENST00000383866 C7P10643 843 aa8.41□□□□□ -1.06
RNU6-47P-201ENST00000383866 POTEGQ6S5H5 508 aa8.41□□□□□ -1.06
RNU6-47P-201ENST00000383866 MAMSTRQ6ZN01 415 aa8.41□□□□□ -1.06
RNU6-47P-201ENST00000383866 SLC39A7Q92504 469 aa8.41□□□□□ -1.06
RNU6-47P-201ENST00000383866 PCDH10Q9P2E7 1040 aa8.4□□□□□ -1.06
RNU6-47P-201ENST00000383866 METRNQ9UJH8 293 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms