RNA–Protein interactions for RNA: ENST00000382186.6

SMARCA2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3 BASIC

Gene SMARCA2, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-207ENST00000382186 AEBP2Q6ZN18 517 aaPredicted RBP24.33■■□□□ 1.49
SMARCA2-207ENST00000382186 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
SMARCA2-207ENST00000382186 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
SMARCA2-207ENST00000382186 PHF23Q9BUL5 403 aaPredicted RBP20.53■□□□□ 0.88
SMARCA2-207ENST00000382186 FOXD1Q16676 465 aa19.34■□□□□ 0.69
SMARCA2-207ENST00000382186 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
SMARCA2-207ENST00000382186 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
SMARCA2-207ENST00000382186 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
SMARCA2-207ENST00000382186 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
SMARCA2-207ENST00000382186 MSH5O43196 834 aa18.1■□□□□ 0.49
SMARCA2-207ENST00000382186 ADRA2BP18089 450 aa18.1■□□□□ 0.49
SMARCA2-207ENST00000382186 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
SMARCA2-207ENST00000382186 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
SMARCA2-207ENST00000382186 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
SMARCA2-207ENST00000382186 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
SMARCA2-207ENST00000382186 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.16
SMARCA2-207ENST00000382186 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
SMARCA2-207ENST00000382186 RNF216Q9NWF9 866 aaPredicted RBP15.84■□□□□ 0.13
SMARCA2-207ENST00000382186 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
SMARCA2-207ENST00000382186 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
SMARCA2-207ENST00000382186 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
SMARCA2-207ENST00000382186 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
SMARCA2-207ENST00000382186 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
SMARCA2-207ENST00000382186 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
SMARCA2-207ENST00000382186 KCNA4P22459 653 aa15.27■□□□□ 0.04
SMARCA2-207ENST00000382186 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
SMARCA2-207ENST00000382186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
SMARCA2-207ENST00000382186 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
SMARCA2-207ENST00000382186 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
SMARCA2-207ENST00000382186 SPINK5Q9NQ38 1064 aaPredicted RBP14.61□□□□□ -0.07
SMARCA2-207ENST00000382186 CAPN15O75808 1086 aa14.6□□□□□ -0.07
SMARCA2-207ENST00000382186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
SMARCA2-207ENST00000382186 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
SMARCA2-207ENST00000382186 APLP2Q06481 763 aa14.52□□□□□ -0.09
SMARCA2-207ENST00000382186 DSG3P32926 999 aa14.48□□□□□ -0.09
SMARCA2-207ENST00000382186 SLC4A1APQ9BWU0 796 aaKnown RBP14.46□□□□□ -0.09
SMARCA2-207ENST00000382186 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
SMARCA2-207ENST00000382186 NISCHQ9Y2I1 1504 aa14.4□□□□□ -0.1
SMARCA2-207ENST00000382186 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
SMARCA2-207ENST00000382186 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
SMARCA2-207ENST00000382186 POTEHQ6S545 545 aa14.36□□□□□ -0.11
SMARCA2-207ENST00000382186 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
SMARCA2-207ENST00000382186 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
SMARCA2-207ENST00000382186 ABCB7O75027 752 aa14.24□□□□□ -0.13
SMARCA2-207ENST00000382186 POLA2Q14181 598 aa14.03□□□□□ -0.16
SMARCA2-207ENST00000382186 ZBTB22O15209 634 aa14.02□□□□□ -0.17
SMARCA2-207ENST00000382186 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
SMARCA2-207ENST00000382186 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
SMARCA2-207ENST00000382186 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
SMARCA2-207ENST00000382186 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
SMARCA2-207ENST00000382186 OSCARQ8IYS5 282 aa13.56□□□□□ -0.24
SMARCA2-207ENST00000382186 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
SMARCA2-207ENST00000382186 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
SMARCA2-207ENST00000382186 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
SMARCA2-207ENST00000382186 FBLN2P98095 1184 aa13.48□□□□□ -0.25
SMARCA2-207ENST00000382186 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
SMARCA2-207ENST00000382186 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
SMARCA2-207ENST00000382186 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
SMARCA2-207ENST00000382186 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
SMARCA2-207ENST00000382186 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
SMARCA2-207ENST00000382186 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
SMARCA2-207ENST00000382186 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
SMARCA2-207ENST00000382186 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
SMARCA2-207ENST00000382186 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
SMARCA2-207ENST00000382186 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
SMARCA2-207ENST00000382186 SP7Q8TDD2 431 aaPredicted RBP13.14□□□□□ -0.31
SMARCA2-207ENST00000382186 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMARCA2-207ENST00000382186 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
SMARCA2-207ENST00000382186 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
SMARCA2-207ENST00000382186 ABCC9O60706 1549 aa13.01□□□□□ -0.33
SMARCA2-207ENST00000382186 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
SMARCA2-207ENST00000382186 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
SMARCA2-207ENST00000382186 HAX1O00165 279 aa12.94□□□□□ -0.34
SMARCA2-207ENST00000382186 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-207ENST00000382186 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
SMARCA2-207ENST00000382186 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
SMARCA2-207ENST00000382186 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
SMARCA2-207ENST00000382186 EVX2Q03828 476 aa12.73□□□□□ -0.37
SMARCA2-207ENST00000382186 STAG3Q9UJ98 1225 aa12.71□□□□□ -0.37
SMARCA2-207ENST00000382186 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
SMARCA2-207ENST00000382186 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
SMARCA2-207ENST00000382186 CREBZFQ9NS37 354 aa12.54□□□□□ -0.4
SMARCA2-207ENST00000382186 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
SMARCA2-207ENST00000382186 GABBR2O75899 941 aa12.48□□□□□ -0.41
SMARCA2-207ENST00000382186 PROM2Q8N271 834 aa12.48□□□□□ -0.41
SMARCA2-207ENST00000382186 CLCN6P51797 869 aa12.39□□□□□ -0.43
SMARCA2-207ENST00000382186 RB1CC1Q8TDY2 1594 aa12.39□□□□□ -0.43
SMARCA2-207ENST00000382186 NPM1P06748 294 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMARCA2-207ENST00000382186 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
SMARCA2-207ENST00000382186 MNX1P50219 401 aaPredicted RBP12.34□□□□□ -0.43
SMARCA2-207ENST00000382186 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
SMARCA2-207ENST00000382186 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
SMARCA2-207ENST00000382186 LHX8Q68G74 356 aa12.31□□□□□ -0.44
SMARCA2-207ENST00000382186 NACADO15069 1562 aa12.3□□□□□ -0.44
SMARCA2-207ENST00000382186 FKBP8Q14318 412 aa12.24□□□□□ -0.45
SMARCA2-207ENST00000382186 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
SMARCA2-207ENST00000382186 DCAF8L2P0C7V8 631 aa12.22□□□□□ -0.45
SMARCA2-207ENST00000382186 MIER1Q8N108 512 aa12.21□□□□□ -0.45
SMARCA2-207ENST00000382186 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
SMARCA2-207ENST00000382186 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms