RNA–Protein interactions for RNA: ENST00000381571.5

COMMD8-201, Transcript of COMM domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD8, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-201ENST00000381571 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
COMMD8-201ENST00000381571 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
COMMD8-201ENST00000381571 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.02
COMMD8-201ENST00000381571 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
COMMD8-201ENST00000381571 FOXD1Q16676 465 aa19.72■□□□□ 0.75
COMMD8-201ENST00000381571 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
COMMD8-201ENST00000381571 PPP6R1Q9UPN7 881 aa18.93■□□□□ 0.62
COMMD8-201ENST00000381571 ADRA2BP18089 450 aa18.9■□□□□ 0.62
COMMD8-201ENST00000381571 PIAS4Q8N2W9 510 aaPredicted RBP18.58■□□□□ 0.57
COMMD8-201ENST00000381571 MSH5O43196 834 aa18.18■□□□□ 0.5
COMMD8-201ENST00000381571 PPP4R3CPQ6ZMV5 832 aa17.37■□□□□ 0.37
COMMD8-201ENST00000381571 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
COMMD8-201ENST00000381571 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
COMMD8-201ENST00000381571 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
COMMD8-201ENST00000381571 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
COMMD8-201ENST00000381571 KCNA4P22459 653 aa16.88■□□□□ 0.29
COMMD8-201ENST00000381571 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
COMMD8-201ENST00000381571 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
COMMD8-201ENST00000381571 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
COMMD8-201ENST00000381571 RNF216Q9NWF9 866 aaPredicted RBP16.56■□□□□ 0.24
COMMD8-201ENST00000381571 HOXD11P31277 338 aaPredicted RBP16.52■□□□□ 0.23
COMMD8-201ENST00000381571 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
COMMD8-201ENST00000381571 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
COMMD8-201ENST00000381571 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
COMMD8-201ENST00000381571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.12
COMMD8-201ENST00000381571 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
COMMD8-201ENST00000381571 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
COMMD8-201ENST00000381571 ZBTB22O15209 634 aa15.53■□□□□ 0.08
COMMD8-201ENST00000381571 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
COMMD8-201ENST00000381571 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.08
COMMD8-201ENST00000381571 U3KPZ7 1027 aaPredicted RBP15.51■□□□□ 0.07
COMMD8-201ENST00000381571 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
COMMD8-201ENST00000381571 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
COMMD8-201ENST00000381571 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
COMMD8-201ENST00000381571 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.03
COMMD8-201ENST00000381571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
COMMD8-201ENST00000381571 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
COMMD8-201ENST00000381571 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
COMMD8-201ENST00000381571 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
COMMD8-201ENST00000381571 APLP2Q06481 763 aa15.08■□□□□ 0.01
COMMD8-201ENST00000381571 CAPN15O75808 1086 aa15.06■□□□□ 0
COMMD8-201ENST00000381571 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
COMMD8-201ENST00000381571 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
COMMD8-201ENST00000381571 ATXN8OSP0DMR3 200 aa14.96□□□□□ -0.01
COMMD8-201ENST00000381571 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
COMMD8-201ENST00000381571 DSG3P32926 999 aa14.81□□□□□ -0.04
COMMD8-201ENST00000381571 ABCB7O75027 752 aa14.79□□□□□ -0.04
COMMD8-201ENST00000381571 POLA2Q14181 598 aa14.7□□□□□ -0.06
COMMD8-201ENST00000381571 ZBTB12Q9Y330 459 aaPredicted RBP14.4□□□□□ -0.1
COMMD8-201ENST00000381571 FBLN2P98095 1184 aa14.33□□□□□ -0.12
COMMD8-201ENST00000381571 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
COMMD8-201ENST00000381571 OSCARQ8IYS5 282 aa14.21□□□□□ -0.13
COMMD8-201ENST00000381571 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
COMMD8-201ENST00000381571 SPDYE2BA6NHP3 402 aa14.01□□□□□ -0.17
COMMD8-201ENST00000381571 SPDYE6P0CI01 402 aa14.01□□□□□ -0.17
COMMD8-201ENST00000381571 SPDYE2Q495Y8 402 aa14.01□□□□□ -0.17
COMMD8-201ENST00000381571 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
COMMD8-201ENST00000381571 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
COMMD8-201ENST00000381571 FKBP8Q14318 412 aa13.9□□□□□ -0.18
COMMD8-201ENST00000381571 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
COMMD8-201ENST00000381571 SSUH2Q9Y2M2 353 aa13.9□□□□□ -0.18
COMMD8-201ENST00000381571 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
COMMD8-201ENST00000381571 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
COMMD8-201ENST00000381571 PROM2Q8N271 834 aa13.67□□□□□ -0.22
COMMD8-201ENST00000381571 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
COMMD8-201ENST00000381571 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
COMMD8-201ENST00000381571 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
COMMD8-201ENST00000381571 CHRDL2Q6WN34 429 aa13.56□□□□□ -0.24
COMMD8-201ENST00000381571 POTEHQ6S545 545 aa13.53□□□□□ -0.24
COMMD8-201ENST00000381571 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
COMMD8-201ENST00000381571 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
COMMD8-201ENST00000381571 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
COMMD8-201ENST00000381571 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
COMMD8-201ENST00000381571 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
COMMD8-201ENST00000381571 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
COMMD8-201ENST00000381571 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
COMMD8-201ENST00000381571 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
COMMD8-201ENST00000381571 MIER1Q8N108 512 aa13.25□□□□□ -0.29
COMMD8-201ENST00000381571 VASPP50552 380 aaPredicted RBP13.23□□□□□ -0.29
COMMD8-201ENST00000381571 PLCD3Q8N3E9 789 aa13.22□□□□□ -0.29
COMMD8-201ENST00000381571 PLEKHG5O94827 1062 aa13.16□□□□□ -0.3
COMMD8-201ENST00000381571 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
COMMD8-201ENST00000381571 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
COMMD8-201ENST00000381571 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
COMMD8-201ENST00000381571 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
COMMD8-201ENST00000381571 ZBTB47Q9UFB7 747 aaPredicted RBP13.04□□□□□ -0.32
COMMD8-201ENST00000381571 NPM1P06748 294 aaKnown RBP eCLIP13.02□□□□□ -0.33
COMMD8-201ENST00000381571 HAX1O00165 279 aa12.98□□□□□ -0.33
COMMD8-201ENST00000381571 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
COMMD8-201ENST00000381571 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
COMMD8-201ENST00000381571 NUBP1P53384 320 aa12.91□□□□□ -0.34
COMMD8-201ENST00000381571 RASEFQ8IZ41 740 aa12.9□□□□□ -0.34
COMMD8-201ENST00000381571 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
COMMD8-201ENST00000381571 EVX2Q03828 476 aa12.89□□□□□ -0.35
COMMD8-201ENST00000381571 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
COMMD8-201ENST00000381571 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
COMMD8-201ENST00000381571 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
COMMD8-201ENST00000381571 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
COMMD8-201ENST00000381571 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
COMMD8-201ENST00000381571 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms