RNA–Protein interactions for RNA: ENST00000381309.7

KDM4C-202, Transcript of lysine demethylase 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4C, Length 4,655 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-202ENST00000381309 NISCHQ9Y2I1 1504 aa17.28■□□□□ 0.36
KDM4C-202ENST00000381309 DCAF8L2P0C7V8 631 aa16.9■□□□□ 0.3
KDM4C-202ENST00000381309 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
KDM4C-202ENST00000381309 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
KDM4C-202ENST00000381309 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
KDM4C-202ENST00000381309 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
KDM4C-202ENST00000381309 PCGF6Q9BYE7 350 aa15.42■□□□□ 0.06
KDM4C-202ENST00000381309 TTBK1Q5TCY1 1321 aaPredicted RBP15.37■□□□□ 0.05
KDM4C-202ENST00000381309 LOC105371045A0A1W2PR82 267 aa15.3■□□□□ 0.04
KDM4C-202ENST00000381309 PPARGC1BQ86YN6 1023 aaKnown RBP15.27■□□□□ 0.03
KDM4C-202ENST00000381309 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
KDM4C-202ENST00000381309 RANGAP1P46060 587 aaPredicted RBP15.04■□□□□ -0
KDM4C-202ENST00000381309 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
KDM4C-202ENST00000381309 ABCC9O60706 1549 aa14.89□□□□□ -0.03
KDM4C-202ENST00000381309 PABPN1Q86U42 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
KDM4C-202ENST00000381309 HRCP23327 699 aa14.63□□□□□ -0.07
KDM4C-202ENST00000381309 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
KDM4C-202ENST00000381309 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
KDM4C-202ENST00000381309 UBTFP17480 764 aaKnown RBP14.53□□□□□ -0.08
KDM4C-202ENST00000381309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
KDM4C-202ENST00000381309 CCER1Q8TC90 406 aaPredicted RBP14.48□□□□□ -0.09
KDM4C-202ENST00000381309 TRIM26Q12899 539 aaPredicted RBP14.42□□□□□ -0.1
KDM4C-202ENST00000381309 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
KDM4C-202ENST00000381309 YTHDC1Q96MU7 727 aaKnown RBP14.36□□□□□ -0.11
KDM4C-202ENST00000381309 ATP1B4Q9UN42 357 aaPredicted RBP14.34□□□□□ -0.11
KDM4C-202ENST00000381309 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
KDM4C-202ENST00000381309 ITGAEP38570 1179 aa14.29□□□□□ -0.12
KDM4C-202ENST00000381309 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
KDM4C-202ENST00000381309 APLP2Q06481 763 aa14.23□□□□□ -0.13
KDM4C-202ENST00000381309 CECR2Q9BXF3 1484 aa14.03□□□□□ -0.16
KDM4C-202ENST00000381309 RSF1Q96T23 1441 aaPredicted RBP14.01□□□□□ -0.17
KDM4C-202ENST00000381309 RB1CC1Q8TDY2 1594 aa14□□□□□ -0.17
KDM4C-202ENST00000381309 CNGB1Q14028 1251 aaPredicted RBP13.99□□□□□ -0.17
KDM4C-202ENST00000381309 P3H3Q8IVL6 736 aa13.96□□□□□ -0.18
KDM4C-202ENST00000381309 ZEB1P37275 1124 aaPredicted RBP13.94□□□□□ -0.18
KDM4C-202ENST00000381309 ARID3CA6NKF2 412 aa13.9□□□□□ -0.18
KDM4C-202ENST00000381309 NACADO15069 1562 aa13.9□□□□□ -0.18
KDM4C-202ENST00000381309 DIEXFQ68CQ4 756 aaKnown RBP13.89□□□□□ -0.19
KDM4C-202ENST00000381309 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
KDM4C-202ENST00000381309 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
KDM4C-202ENST00000381309 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
KDM4C-202ENST00000381309 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
KDM4C-202ENST00000381309 HIRIP3Q9BW71 556 aaPredicted RBP13.73□□□□□ -0.21
KDM4C-202ENST00000381309 FAM50AQ14320 339 aaKnown RBP13.72□□□□□ -0.21
KDM4C-202ENST00000381309 CENPBP07199 599 aaPredicted RBP13.72□□□□□ -0.21
KDM4C-202ENST00000381309 MROH2BQ7Z745 1585 aa13.72□□□□□ -0.21
KDM4C-202ENST00000381309 DCAF1Q9Y4B6 1507 aa13.71□□□□□ -0.21
KDM4C-202ENST00000381309 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
KDM4C-202ENST00000381309 SOGA1O94964 1423 aa13.7□□□□□ -0.22
KDM4C-202ENST00000381309 ABCC8Q09428 1581 aa13.66□□□□□ -0.22
KDM4C-202ENST00000381309 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
KDM4C-202ENST00000381309 BCANQ96GW7 911 aa13.64□□□□□ -0.23
KDM4C-202ENST00000381309 CCDC88BA6NC98 1476 aa13.6□□□□□ -0.23
KDM4C-202ENST00000381309 SENP3-EIF4A1A0A087X0R7 540 aa13.59□□□□□ -0.23
KDM4C-202ENST00000381309 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.24
KDM4C-202ENST00000381309 MIER1Q8N108 512 aa13.58□□□□□ -0.24
KDM4C-202ENST00000381309 WIZO95785 1651 aa13.56□□□□□ -0.24
KDM4C-202ENST00000381309 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
KDM4C-202ENST00000381309 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
KDM4C-202ENST00000381309 CEP162Q5TB80 1403 aa13.52□□□□□ -0.24
KDM4C-202ENST00000381309 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
KDM4C-202ENST00000381309 FBLN2P98095 1184 aa13.51□□□□□ -0.25
KDM4C-202ENST00000381309 ACIN1Q9UKV3 1341 aaKnown RBP13.51□□□□□ -0.25
KDM4C-202ENST00000381309 KANK4Q5T7N3 995 aaPredicted RBP13.45□□□□□ -0.26
KDM4C-202ENST00000381309 CHIC2Q9UKJ5 165 aa13.45□□□□□ -0.26
KDM4C-202ENST00000381309 ZNF326Q5BKZ1 582 aaKnown RBP13.42□□□□□ -0.26
KDM4C-202ENST00000381309 DDX10Q13206 875 aaKnown RBP13.42□□□□□ -0.26
KDM4C-202ENST00000381309 TRIM52Q96A61 297 aa13.42□□□□□ -0.26
KDM4C-202ENST00000381309 CLIP1P30622 1438 aa13.39□□□□□ -0.27
KDM4C-202ENST00000381309 SIN3AQ96ST3 1273 aa13.39□□□□□ -0.27
KDM4C-202ENST00000381309 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
KDM4C-202ENST00000381309 ZNF777Q9ULD5 760 aaPredicted RBP13.31□□□□□ -0.28
KDM4C-202ENST00000381309 KCNH8Q96L42 1107 aa13.31□□□□□ -0.28
KDM4C-202ENST00000381309 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
KDM4C-202ENST00000381309 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.28
KDM4C-202ENST00000381309 RRP7BPQ9NSQ0 103 aa13.26□□□□□ -0.29
KDM4C-202ENST00000381309 EIF4G1Q04637 1599 aaKnown RBP13.26□□□□□ -0.29
KDM4C-202ENST00000381309 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
KDM4C-202ENST00000381309 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
KDM4C-202ENST00000381309 TNIKQ9UKE5 1360 aa13.24□□□□□ -0.29
KDM4C-202ENST00000381309 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
KDM4C-202ENST00000381309 MYT1LQ9UL68 1186 aa13.23□□□□□ -0.29
KDM4C-202ENST00000381309 RAPGEF2Q9Y4G8 1499 aa13.2□□□□□ -0.3
KDM4C-202ENST00000381309 FOXD1Q16676 465 aa13.19□□□□□ -0.3
KDM4C-202ENST00000381309 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
KDM4C-202ENST00000381309 GOLGA3Q08378 1498 aa13.19□□□□□ -0.3
KDM4C-202ENST00000381309 NEFLP07196 543 aa13.18□□□□□ -0.3
KDM4C-202ENST00000381309 FKBP8Q14318 412 aa13.15□□□□□ -0.3
KDM4C-202ENST00000381309 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
KDM4C-202ENST00000381309 FAM9BQ8IZU0 186 aa13.1□□□□□ -0.31
KDM4C-202ENST00000381309 TDRD9Q8NDG6 1382 aaKnown RBP13.08□□□□□ -0.31
KDM4C-202ENST00000381309 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
KDM4C-202ENST00000381309 ANP32CO43423 234 aa13.07□□□□□ -0.32
KDM4C-202ENST00000381309 HNRNPUQ00839 825 aaKnown RBP eCLIP13.06□□□□□ -0.32
KDM4C-202ENST00000381309 CUX2O14529 1486 aa13.05□□□□□ -0.32
KDM4C-202ENST00000381309 CEP164Q9UPV0 1460 aa13.05□□□□□ -0.32
KDM4C-202ENST00000381309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■■□□□ 13.3
KDM4C-202ENST00000381309 SMARCA4P51532 1647 aa13.03□□□□□ -0.32
KDM4C-202ENST00000381309 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
KDM4C-202ENST00000381309 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms