RNA–Protein interactions for RNA: ENST00000379806.9

PDHA1-204, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene PDHA1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-204ENST00000379806 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
PDHA1-204ENST00000379806 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
PDHA1-204ENST00000379806 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
PDHA1-204ENST00000379806 CCDC180Q9P1Z9 1646 aa19.81■□□□□ 0.76
PDHA1-204ENST00000379806 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
PDHA1-204ENST00000379806 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
PDHA1-204ENST00000379806 DCAF1Q9Y4B6 1507 aa18.97■□□□□ 0.63
PDHA1-204ENST00000379806 ABCC9O60706 1549 aa18.94■□□□□ 0.62
PDHA1-204ENST00000379806 SCRIBQ14160 1630 aa18.83■□□□□ 0.6
PDHA1-204ENST00000379806 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
PDHA1-204ENST00000379806 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
PDHA1-204ENST00000379806 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
PDHA1-204ENST00000379806 NACADO15069 1562 aa18.46■□□□□ 0.55
PDHA1-204ENST00000379806 RSF1Q96T23 1441 aaPredicted RBP18.45■□□□□ 0.54
PDHA1-204ENST00000379806 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
PDHA1-204ENST00000379806 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
PDHA1-204ENST00000379806 HRCP23327 699 aa18.32■□□□□ 0.52
PDHA1-204ENST00000379806 PPARGC1BQ86YN6 1023 aaKnown RBP18.32■□□□□ 0.52
PDHA1-204ENST00000379806 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
PDHA1-204ENST00000379806 FAM9AQ8IZU1 332 aaPredicted RBP18.3■□□□□ 0.52
PDHA1-204ENST00000379806 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
PDHA1-204ENST00000379806 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.52
PDHA1-204ENST00000379806 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
PDHA1-204ENST00000379806 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
PDHA1-204ENST00000379806 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.52e-6■□□□□ 10.5
PDHA1-204ENST00000379806 WIZO95785 1651 aa18.11■□□□□ 0.49
PDHA1-204ENST00000379806 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
PDHA1-204ENST00000379806 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
PDHA1-204ENST00000379806 MYT1Q01538 1121 aa17.85■□□□□ 0.45
PDHA1-204ENST00000379806 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
PDHA1-204ENST00000379806 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.43
PDHA1-204ENST00000379806 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
PDHA1-204ENST00000379806 TOP2AP11388 1531 aaKnown RBP17.74■□□□□ 0.43
PDHA1-204ENST00000379806 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
PDHA1-204ENST00000379806 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
PDHA1-204ENST00000379806 ABCC8Q09428 1581 aa17.71■□□□□ 0.43
PDHA1-204ENST00000379806 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
PDHA1-204ENST00000379806 TTBK1Q5TCY1 1321 aaPredicted RBP17.63■□□□□ 0.41
PDHA1-204ENST00000379806 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
PDHA1-204ENST00000379806 UBTFP17480 764 aaKnown RBP17.53■□□□□ 0.4
PDHA1-204ENST00000379806 SOGA1O94964 1423 aa17.51■□□□□ 0.39
PDHA1-204ENST00000379806 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
PDHA1-204ENST00000379806 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
PDHA1-204ENST00000379806 RANGAP1P46060 587 aaPredicted RBP17.45■□□□□ 0.38
PDHA1-204ENST00000379806 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
PDHA1-204ENST00000379806 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
PDHA1-204ENST00000379806 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
PDHA1-204ENST00000379806 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
PDHA1-204ENST00000379806 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
PDHA1-204ENST00000379806 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
PDHA1-204ENST00000379806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
PDHA1-204ENST00000379806 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
PDHA1-204ENST00000379806 EEA1Q15075 1411 aa17.22■□□□□ 0.35
PDHA1-204ENST00000379806 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
PDHA1-204ENST00000379806 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
PDHA1-204ENST00000379806 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
PDHA1-204ENST00000379806 GOLGA3Q08378 1498 aa17.19■□□□□ 0.34
PDHA1-204ENST00000379806 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
PDHA1-204ENST00000379806 ACIN1Q9UKV3 1341 aaKnown RBP17.13■□□□□ 0.33
PDHA1-204ENST00000379806 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
PDHA1-204ENST00000379806 CEP164Q9UPV0 1460 aa17.09■□□□□ 0.33
PDHA1-204ENST00000379806 APLP2Q06481 763 aa17.09■□□□□ 0.33
PDHA1-204ENST00000379806 RAPGEF2Q9Y4G8 1499 aa17.06■□□□□ 0.32
PDHA1-204ENST00000379806 CLIP1P30622 1438 aa17.06■□□□□ 0.32
PDHA1-204ENST00000379806 HMGXB3Q12766 1538 aa17.03■□□□□ 0.32
PDHA1-204ENST00000379806 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
PDHA1-204ENST00000379806 TOP2BQ02880 1626 aa17■□□□□ 0.31
PDHA1-204ENST00000379806 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
PDHA1-204ENST00000379806 KIF21BO75037 1637 aa16.95■□□□□ 0.3
PDHA1-204ENST00000379806 CUX1P39880 1505 aa16.95■□□□□ 0.3
PDHA1-204ENST00000379806 BCL11AQ9H165 835 aa16.94■□□□□ 0.3
PDHA1-204ENST00000379806 CFTRP13569 1480 aa16.93■□□□□ 0.3
PDHA1-204ENST00000379806 KIF27Q86VH2 1401 aa16.89■□□□□ 0.29
PDHA1-204ENST00000379806 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
PDHA1-204ENST00000379806 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
PDHA1-204ENST00000379806 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
PDHA1-204ENST00000379806 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
PDHA1-204ENST00000379806 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
PDHA1-204ENST00000379806 CUX2O14529 1486 aa16.84■□□□□ 0.29
PDHA1-204ENST00000379806 ATP1B4Q9UN42 357 aaPredicted RBP16.8■□□□□ 0.28
PDHA1-204ENST00000379806 PRXQ9BXM0 1461 aa16.79■□□□□ 0.28
PDHA1-204ENST00000379806 P3H3Q8IVL6 736 aa16.78■□□□□ 0.28
PDHA1-204ENST00000379806 ITGAEP38570 1179 aa16.76■□□□□ 0.27
PDHA1-204ENST00000379806 NESP48681 1621 aa16.75■□□□□ 0.27
PDHA1-204ENST00000379806 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
PDHA1-204ENST00000379806 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
PDHA1-204ENST00000379806 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
PDHA1-204ENST00000379806 DNAJC5BQ9UF47 199 aa16.73■□□□□ 0.27
PDHA1-204ENST00000379806 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
PDHA1-204ENST00000379806 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
PDHA1-204ENST00000379806 IGF1RP08069 1367 aa16.7■□□□□ 0.26
PDHA1-204ENST00000379806 CARMIL1Q5VZK9 1371 aa16.69■□□□□ 0.26
PDHA1-204ENST00000379806 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
PDHA1-204ENST00000379806 DIEXFQ68CQ4 756 aaKnown RBP16.67■□□□□ 0.26
PDHA1-204ENST00000379806 PRDM2Q13029 1718 aa16.64■□□□□ 0.25
PDHA1-204ENST00000379806 PRKCSHP14314 528 aaPredicted RBP16.63■□□□□ 0.25
PDHA1-204ENST00000379806 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
PDHA1-204ENST00000379806 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
PDHA1-204ENST00000379806 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
PDHA1-204ENST00000379806 POLA1P09884 1462 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms