RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
KCNC1-202ENST00000379472 PELP1Q8IZL8 1130 aaKnown RBP25.99■■□□□ 1.75
KCNC1-202ENST00000379472 EHMT2Q96KQ7 1210 aa25.51■■□□□ 1.67
KCNC1-202ENST00000379472 FAM9AQ8IZU1 332 aaPredicted RBP25.27■■□□□ 1.64
KCNC1-202ENST00000379472 ERICH6Q7L0X2 663 aa25.23■■□□□ 1.63
KCNC1-202ENST00000379472 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
KCNC1-202ENST00000379472 APLP2Q06481 763 aa25.13■■□□□ 1.61
KCNC1-202ENST00000379472 CCER1Q8TC90 406 aaPredicted RBP24.88■■□□□ 1.57
KCNC1-202ENST00000379472 TTBK1Q5TCY1 1321 aaPredicted RBP24.62■■□□□ 1.53
KCNC1-202ENST00000379472 ATP1B4Q9UN42 357 aaPredicted RBP24.49■■□□□ 1.51
KCNC1-202ENST00000379472 RANGAP1P46060 587 aaPredicted RBP24.37■■□□□ 1.49
KCNC1-202ENST00000379472 MYT1Q01538 1121 aa24.36■■□□□ 1.49
KCNC1-202ENST00000379472 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
KCNC1-202ENST00000379472 NEFLP07196 543 aa24.14■■□□□ 1.45
KCNC1-202ENST00000379472 DAXXQ9UER7 740 aaPredicted RBP24.09■■□□□ 1.45
KCNC1-202ENST00000379472 PCGF6Q9BYE7 350 aa24.08■■□□□ 1.45
KCNC1-202ENST00000379472 MYT1LQ9UL68 1186 aa24.08■■□□□ 1.45
KCNC1-202ENST00000379472 CENPBP07199 599 aaPredicted RBP24.07■■□□□ 1.44
KCNC1-202ENST00000379472 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.4
KCNC1-202ENST00000379472 POLR3GLQ9BT43 218 aa23.74■■□□□ 1.39
KCNC1-202ENST00000379472 YTHDC1Q96MU7 727 aaKnown RBP23.72■■□□□ 1.39
KCNC1-202ENST00000379472 SLC4A1APQ9BWU0 796 aaKnown RBP23.7■■□□□ 1.38
KCNC1-202ENST00000379472 CNGB1Q14028 1251 aaPredicted RBP23.5■■□□□ 1.35
KCNC1-202ENST00000379472 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
KCNC1-202ENST00000379472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
KCNC1-202ENST00000379472 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
KCNC1-202ENST00000379472 ZNF316A6NFI3 1004 aaPredicted RBP23.38■■□□□ 1.33
KCNC1-202ENST00000379472 CLSPNQ9HAW4 1339 aa23.37■■□□□ 1.33
KCNC1-202ENST00000379472 ZEB1P37275 1124 aaPredicted RBP23.34■■□□□ 1.33
KCNC1-202ENST00000379472 SLC24A1O60721 1099 aa23.18■■□□□ 1.3
KCNC1-202ENST00000379472 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
KCNC1-202ENST00000379472 ITGAEP38570 1179 aa23.11■■□□□ 1.29
KCNC1-202ENST00000379472 RTL5Q5HYW3 569 aaPredicted RBP23.07■■□□□ 1.28
KCNC1-202ENST00000379472 ZBTB47Q9UFB7 747 aaPredicted RBP23.03■■□□□ 1.28
KCNC1-202ENST00000379472 BCL11AQ9H165 835 aa23■■□□□ 1.27
KCNC1-202ENST00000379472 PPARGC1BQ86YN6 1023 aaKnown RBP22.95■■□□□ 1.27
KCNC1-202ENST00000379472 NISCHQ9Y2I1 1504 aa22.81■■□□□ 1.24
KCNC1-202ENST00000379472 BCANQ96GW7 911 aa22.77■■□□□ 1.24
KCNC1-202ENST00000379472 CANXP27824 592 aaKnown RBP22.54■■□□□ 1.2
KCNC1-202ENST00000379472 NEFMP07197 916 aa22.51■■□□□ 1.19
KCNC1-202ENST00000379472 TRIM52Q96A61 297 aa22.4■■□□□ 1.18
KCNC1-202ENST00000379472 PLPPR3Q6T4P5 718 aa22.34■■□□□ 1.17
KCNC1-202ENST00000379472 ZNF326Q5BKZ1 582 aaKnown RBP22.33■■□□□ 1.17
KCNC1-202ENST00000379472 CDK11BP21127 795 aaKnown RBP22.32■■□□□ 1.16
KCNC1-202ENST00000379472 CDK11AQ9UQ88 783 aaPredicted RBP22.32■■□□□ 1.16
KCNC1-202ENST00000379472 FAM50AQ14320 339 aaKnown RBP22.28■■□□□ 1.16
KCNC1-202ENST00000379472 ANP32BQ92688 251 aaKnown RBP22.24■■□□□ 1.15
KCNC1-202ENST00000379472 A0A0G2JS52 829 aa22.18■■□□□ 1.14
KCNC1-202ENST00000379472 HSP90AA1P07900 732 aaKnown RBP22.16■■□□□ 1.14
KCNC1-202ENST00000379472 ESF1Q9H501 851 aaKnown RBP22.16■■□□□ 1.14
KCNC1-202ENST00000379472 NEUROD1Q13562 356 aa22.15■■□□□ 1.14
KCNC1-202ENST00000379472 TRIM26Q12899 539 aaPredicted RBP22.11■■□□□ 1.13
KCNC1-202ENST00000379472 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
KCNC1-202ENST00000379472 FBLN2P98095 1184 aa22.07■■□□□ 1.12
KCNC1-202ENST00000379472 EIF5BO60841 1220 aaKnown RBP22.02■■□□□ 1.12
KCNC1-202ENST00000379472 HRCP23327 699 aa22.01■■□□□ 1.11
KCNC1-202ENST00000379472 STAG3Q9UJ98 1225 aa21.99■■□□□ 1.11
KCNC1-202ENST00000379472 TULP1O00294 542 aaPredicted RBP21.99■■□□□ 1.11
KCNC1-202ENST00000379472 NPM2Q86SE8 214 aaKnown RBP21.97■■□□□ 1.11
KCNC1-202ENST00000379472 ANP32CO43423 234 aa21.96■■□□□ 1.11
KCNC1-202ENST00000379472 ANP32AP39687 249 aaKnown RBP21.89■■□□□ 1.1
KCNC1-202ENST00000379472 NCBP3Q53F19 620 aaKnown RBP21.84■■□□□ 1.09
KCNC1-202ENST00000379472 DIEXFQ68CQ4 756 aaKnown RBP21.84■■□□□ 1.09
KCNC1-202ENST00000379472 CHGAP10645 457 aaKnown RBP21.81■■□□□ 1.08
KCNC1-202ENST00000379472 UPF2Q9HAU5 1272 aaKnown RBP21.8■■□□□ 1.08
KCNC1-202ENST00000379472 PLEKHG5O94827 1062 aa21.76■■□□□ 1.07
KCNC1-202ENST00000379472 GLIPR1L2Q4G1C9 344 aa21.73■■□□□ 1.07
KCNC1-202ENST00000379472 ARXQ96QS3 562 aa21.73■■□□□ 1.07
KCNC1-202ENST00000379472 ZBTB7CA1YPR0 619 aa21.7■■□□□ 1.06
KCNC1-202ENST00000379472 ARID3CA6NKF2 412 aa21.66■■□□□ 1.06
KCNC1-202ENST00000379472 ZNF777Q9ULD5 760 aaPredicted RBP21.62■■□□□ 1.05
KCNC1-202ENST00000379472 C14orf37Q86TY3 774 aa21.55■■□□□ 1.04
KCNC1-202ENST00000379472 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
KCNC1-202ENST00000379472 HAP1P54257 671 aaPredicted RBP21.54■■□□□ 1.04
KCNC1-202ENST00000379472 NPHP1O15259 732 aa21.5■■□□□ 1.03
KCNC1-202ENST00000379472 SALL2Q9Y467 1007 aaPredicted RBP21.47■■□□□ 1.03
KCNC1-202ENST00000379472 MYH16Q9H6N6 1097 aa21.45■■□□□ 1.02
KCNC1-202ENST00000379472 NPM1P06748 294 aaKnown RBP eCLIP21.45■■□□□ 1.02
KCNC1-202ENST00000379472 ZRSR1Q15695 479 aaKnown RBP21.43■■□□□ 1.02
KCNC1-202ENST00000379472 CLSTN1O94985 981 aa21.4■■□□□ 1.02
KCNC1-202ENST00000379472 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.39■■□□□ 1.02
KCNC1-202ENST00000379472 NCLP19338 710 aaKnown RBP21.39■■□□□ 1.01
KCNC1-202ENST00000379472 GTF3C3Q9Y5Q9 886 aa21.38■■□□□ 1.01
KCNC1-202ENST00000379472 TAOK2Q9UL54 1235 aa21.38■■□□□ 1.01
KCNC1-202ENST00000379472 TPRNQ4KMQ1 711 aa21.35■■□□□ 1.01
KCNC1-202ENST00000379472 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
KCNC1-202ENST00000379472 P3H3Q8IVL6 736 aa21.33■■□□□ 1
KCNC1-202ENST00000379472 PRM3Q9NNZ6 103 aa21.31■■□□□ 1
KCNC1-202ENST00000379472 NBR1Q14596 966 aa21.29■■□□□ 1
KCNC1-202ENST00000379472 TRIM44Q96DX7 344 aaPredicted RBP21.27■■□□□ 1
KCNC1-202ENST00000379472 WDR43Q15061 677 aaKnown RBP eCLIP21.25■□□□□ 0.99
KCNC1-202ENST00000379472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.99
KCNC1-202ENST00000379472 TNNT2P45379 298 aaPredicted RBP21.24■□□□□ 0.99
KCNC1-202ENST00000379472 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
KCNC1-202ENST00000379472 PTMAP06454 111 aaKnown RBP21.18■□□□□ 0.98
KCNC1-202ENST00000379472 DNTTIP2Q5QJE6 756 aaKnown RBP21.18■□□□□ 0.98
KCNC1-202ENST00000379472 PPP1R15AO75807 674 aaPredicted RBP21.13■□□□□ 0.97
KCNC1-202ENST00000379472 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
KCNC1-202ENST00000379472 PABPN1Q86U42 306 aaKnown RBP eCLIP21.13■□□□□ 0.97
KCNC1-202ENST00000379472 TMC1Q8TDI8 760 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms