RNA–Protein interactions for RNA: ENST00000378850.4

C4orf47-201, Transcript of chromosome 4 open reading frame 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4orf47, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47-201ENST00000378850 AEBP2Q6ZN18 517 aaPredicted RBP32.72■■■□□ 2.83
C4orf47-201ENST00000378850 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
C4orf47-201ENST00000378850 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
C4orf47-201ENST00000378850 PHF23Q9BUL5 403 aaPredicted RBP27.58■■■□□ 2.01
C4orf47-201ENST00000378850 FOXD1Q16676 465 aa26.12■■□□□ 1.77
C4orf47-201ENST00000378850 POTEDQ86YR6 584 aa24.58■■□□□ 1.53
C4orf47-201ENST00000378850 MSH5O43196 834 aa24.53■■□□□ 1.52
C4orf47-201ENST00000378850 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
C4orf47-201ENST00000378850 PIAS4Q8N2W9 510 aaPredicted RBP24.31■■□□□ 1.48
C4orf47-201ENST00000378850 PPP6R1Q9UPN7 881 aa24.18■■□□□ 1.46
C4orf47-201ENST00000378850 ADRA2BP18089 450 aa24.09■■□□□ 1.45
C4orf47-201ENST00000378850 MAPK8IP2Q13387 824 aaPredicted RBP22.26■■□□□ 1.15
C4orf47-201ENST00000378850 DMRT2Q9Y5R5 561 aa22.09■■□□□ 1.13
C4orf47-201ENST00000378850 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
C4orf47-201ENST00000378850 PPP4R3CPQ6ZMV5 832 aa21.35■■□□□ 1.01
C4orf47-201ENST00000378850 CACNB1Q02641 598 aaPredicted RBP21.33■■□□□ 1.01
C4orf47-201ENST00000378850 DCAF8L1A6NGE4 600 aa21.29■■□□□ 1
C4orf47-201ENST00000378850 HOXD11P31277 338 aaPredicted RBP21.14■□□□□ 0.97
C4orf47-201ENST00000378850 CNKSR2Q8WXI2 1034 aa21.01■□□□□ 0.95
C4orf47-201ENST00000378850 RNF39Q9H2S5 420 aa20.9■□□□□ 0.94
C4orf47-201ENST00000378850 RNF216Q9NWF9 866 aaPredicted RBP20.89■□□□□ 0.93
C4orf47-201ENST00000378850 C1QBPQ07021 282 aaKnown RBP20.58■□□□□ 0.89
C4orf47-201ENST00000378850 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
C4orf47-201ENST00000378850 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
C4orf47-201ENST00000378850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.2■□□□□ 0.82
C4orf47-201ENST00000378850 NPM3O75607 178 aaKnown RBP20.12■□□□□ 0.81
C4orf47-201ENST00000378850 U3KPZ7 1027 aaPredicted RBP19.7■□□□□ 0.74
C4orf47-201ENST00000378850 SPINK5Q9NQ38 1064 aaPredicted RBP19.56■□□□□ 0.72
C4orf47-201ENST00000378850 CAPN15O75808 1086 aa19.55■□□□□ 0.72
C4orf47-201ENST00000378850 DSG3P32926 999 aa19.48■□□□□ 0.71
C4orf47-201ENST00000378850 KCNA4P22459 653 aa19.44■□□□□ 0.7
C4orf47-201ENST00000378850 SLC4A2P04920 1241 aa19.31■□□□□ 0.68
C4orf47-201ENST00000378850 POTEHQ6S545 545 aa19.19■□□□□ 0.66
C4orf47-201ENST00000378850 TRHP20396 242 aaPredicted RBP19.17■□□□□ 0.66
C4orf47-201ENST00000378850 ABCB7O75027 752 aa19.07■□□□□ 0.64
C4orf47-201ENST00000378850 APLP2Q06481 763 aa19.07■□□□□ 0.64
C4orf47-201ENST00000378850 ZNF219Q9P2Y4 722 aaPredicted RBP19.03■□□□□ 0.64
C4orf47-201ENST00000378850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
C4orf47-201ENST00000378850 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
C4orf47-201ENST00000378850 SAMD1Q6SPF0 538 aaPredicted RBP18.87■□□□□ 0.61
C4orf47-201ENST00000378850 MYCNP04198 464 aaPredicted RBP18.58■□□□□ 0.56
C4orf47-201ENST00000378850 POLA2Q14181 598 aa18.56■□□□□ 0.56
C4orf47-201ENST00000378850 RBM42Q9BTD8 480 aaKnown RBP18.56■□□□□ 0.56
C4orf47-201ENST00000378850 CHRDL2Q6WN34 429 aa18.33■□□□□ 0.52
C4orf47-201ENST00000378850 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
C4orf47-201ENST00000378850 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
C4orf47-201ENST00000378850 FOXD4L1Q9NU39 408 aa18.21■□□□□ 0.51
C4orf47-201ENST00000378850 AKT1S1Q96B36 256 aa18.08■□□□□ 0.48
C4orf47-201ENST00000378850 ZBTB12Q9Y330 459 aaPredicted RBP18.06■□□□□ 0.48
C4orf47-201ENST00000378850 REM2Q8IYK8 340 aaPredicted RBP17.94■□□□□ 0.46
C4orf47-201ENST00000378850 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
C4orf47-201ENST00000378850 ZBTB22O15209 634 aa17.84■□□□□ 0.45
C4orf47-201ENST00000378850 PIP4P2Q8N4L2 257 aa17.82■□□□□ 0.44
C4orf47-201ENST00000378850 SP7Q8TDD2 431 aaPredicted RBP17.81■□□□□ 0.44
C4orf47-201ENST00000378850 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
C4orf47-201ENST00000378850 ATXN8OSP0DMR3 200 aa17.66■□□□□ 0.42
C4orf47-201ENST00000378850 HAX1O00165 279 aa17.65■□□□□ 0.42
C4orf47-201ENST00000378850 FXR2P51116 673 aaKnown RBP eCLIP17.65■□□□□ 0.42
C4orf47-201ENST00000378850 FBLN2P98095 1184 aa17.52■□□□□ 0.4
C4orf47-201ENST00000378850 SPDYE2BA6NHP3 402 aa17.51■□□□□ 0.39
C4orf47-201ENST00000378850 SPDYE6P0CI01 402 aa17.51■□□□□ 0.39
C4orf47-201ENST00000378850 SPDYE2Q495Y8 402 aa17.51■□□□□ 0.39
C4orf47-201ENST00000378850 EVX2Q03828 476 aa17.4■□□□□ 0.38
C4orf47-201ENST00000378850 MKRN4PQ13434 485 aaPredicted RBP17.36■□□□□ 0.37
C4orf47-201ENST00000378850 CLEC11AQ9Y240 323 aa17.36■□□□□ 0.37
C4orf47-201ENST00000378850 PRKAR2AP13861 404 aaKnown RBP17.3■□□□□ 0.36
C4orf47-201ENST00000378850 SPDYE1Q8NFV5 336 aaPredicted RBP17.3■□□□□ 0.36
C4orf47-201ENST00000378850 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
C4orf47-201ENST00000378850 SSUH2Q9Y2M2 353 aa17.22■□□□□ 0.35
C4orf47-201ENST00000378850 C19orf67A6NJJ6 358 aa17.09■□□□□ 0.33
C4orf47-201ENST00000378850 CHADLQ6NUI6 762 aa17.07■□□□□ 0.32
C4orf47-201ENST00000378850 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
C4orf47-201ENST00000378850 PRR29P0C7W0 189 aa17■□□□□ 0.31
C4orf47-201ENST00000378850 GABBR2O75899 941 aa16.97■□□□□ 0.31
C4orf47-201ENST00000378850 LHX8Q68G74 356 aa16.74■□□□□ 0.27
C4orf47-201ENST00000378850 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
C4orf47-201ENST00000378850 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
C4orf47-201ENST00000378850 CD44P16070 742 aaKnown RBP16.72■□□□□ 0.27
C4orf47-201ENST00000378850 POTEIP0CG38 1075 aa16.6■□□□□ 0.25
C4orf47-201ENST00000378850 CLCN6P51797 869 aa16.51■□□□□ 0.23
C4orf47-201ENST00000378850 CREBZFQ9NS37 354 aa16.47■□□□□ 0.23
C4orf47-201ENST00000378850 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
C4orf47-201ENST00000378850 ZRANB1Q9UGI0 708 aa16.45■□□□□ 0.22
C4orf47-201ENST00000378850 DCBLD2Q96PD2 775 aa16.44■□□□□ 0.22
C4orf47-201ENST00000378850 ZNF579Q8NAF0 562 aaKnown RBP16.4■□□□□ 0.22
C4orf47-201ENST00000378850 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
C4orf47-201ENST00000378850 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
C4orf47-201ENST00000378850 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
C4orf47-201ENST00000378850 PAK3O75914 559 aaPredicted RBP16.21■□□□□ 0.19
C4orf47-201ENST00000378850 PHF12Q96QT6 1004 aa16.18■□□□□ 0.18
C4orf47-201ENST00000378850 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
C4orf47-201ENST00000378850 MNX1P50219 401 aaPredicted RBP16.12■□□□□ 0.17
C4orf47-201ENST00000378850 POTEB2H3BUK9 544 aa16.07■□□□□ 0.16
C4orf47-201ENST00000378850 OTUD5Q96G74 571 aa16.05■□□□□ 0.16
C4orf47-201ENST00000378850 PELP1Q8IZL8 1130 aaKnown RBP16.02■□□□□ 0.16
C4orf47-201ENST00000378850 PLSCR2Q9NRY7 297 aa15.98■□□□□ 0.15
C4orf47-201ENST00000378850 MS4A3Q96HJ5 214 aa15.94■□□□□ 0.14
C4orf47-201ENST00000378850 TSPYL2Q9H2G4 693 aaPredicted RBP15.9■□□□□ 0.14
C4orf47-201ENST00000378850 ASTLQ6HA08 431 aaPredicted RBP15.88■□□□□ 0.13
C4orf47-201ENST00000378850 ATMINO43313 823 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms