RNA–Protein interactions for RNA: ENST00000378442.5

CDNF-202, Transcript of cerebral dopamine neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene CDNF, Length 1,492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDNF-202ENST00000378442 NISCHQ9Y2I1 1504 aa26.59■■□□□ 1.85
CDNF-202ENST00000378442 AEBP2Q6ZN18 517 aaPredicted RBP23.93■■□□□ 1.42
CDNF-202ENST00000378442 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
CDNF-202ENST00000378442 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.2
CDNF-202ENST00000378442 ZCCHC6Q5VYS8 1495 aaKnown RBP22.46■■□□□ 1.19
CDNF-202ENST00000378442 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
CDNF-202ENST00000378442 SHROOM4Q9ULL8 1493 aa21.98■■□□□ 1.11
CDNF-202ENST00000378442 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.06
CDNF-202ENST00000378442 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
CDNF-202ENST00000378442 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
CDNF-202ENST00000378442 NACADO15069 1562 aa21.22■□□□□ 0.99
CDNF-202ENST00000378442 ABCC9O60706 1549 aa21.12■□□□□ 0.97
CDNF-202ENST00000378442 SCRIBQ14160 1630 aa21.07■□□□□ 0.96
CDNF-202ENST00000378442 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
CDNF-202ENST00000378442 RSF1Q96T23 1441 aaPredicted RBP20.86■□□□□ 0.93
CDNF-202ENST00000378442 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
CDNF-202ENST00000378442 MROH2BQ7Z745 1585 aa20.53■□□□□ 0.88
CDNF-202ENST00000378442 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
CDNF-202ENST00000378442 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
CDNF-202ENST00000378442 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
CDNF-202ENST00000378442 WIZO95785 1651 aa20.36■□□□□ 0.85
CDNF-202ENST00000378442 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
CDNF-202ENST00000378442 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
CDNF-202ENST00000378442 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
CDNF-202ENST00000378442 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
CDNF-202ENST00000378442 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
CDNF-202ENST00000378442 EIF4G1Q04637 1599 aaKnown RBP20.13■□□□□ 0.81
CDNF-202ENST00000378442 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
CDNF-202ENST00000378442 PEG3Q9GZU2 1588 aa20.07■□□□□ 0.8
CDNF-202ENST00000378442 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
CDNF-202ENST00000378442 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
CDNF-202ENST00000378442 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
CDNF-202ENST00000378442 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.77
CDNF-202ENST00000378442 HRCP23327 699 aa19.83■□□□□ 0.76
CDNF-202ENST00000378442 PCGF6Q9BYE7 350 aa19.83■□□□□ 0.76
CDNF-202ENST00000378442 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.76
CDNF-202ENST00000378442 FAM9AQ8IZU1 332 aaPredicted RBP19.77■□□□□ 0.76
CDNF-202ENST00000378442 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
CDNF-202ENST00000378442 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
CDNF-202ENST00000378442 EEA1Q15075 1411 aa19.72■□□□□ 0.75
CDNF-202ENST00000378442 WRNQ14191 1432 aaPredicted RBP eCLIP19.61■□□□□ 0.73
CDNF-202ENST00000378442 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
CDNF-202ENST00000378442 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
CDNF-202ENST00000378442 SOGA1O94964 1423 aa19.52■□□□□ 0.72
CDNF-202ENST00000378442 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
CDNF-202ENST00000378442 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
CDNF-202ENST00000378442 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
CDNF-202ENST00000378442 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
CDNF-202ENST00000378442 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.69
CDNF-202ENST00000378442 TOP2BQ02880 1626 aa19.38■□□□□ 0.69
CDNF-202ENST00000378442 RUSC2Q8N2Y8 1516 aa19.38■□□□□ 0.69
CDNF-202ENST00000378442 CEP162Q5TB80 1403 aa19.38■□□□□ 0.69
CDNF-202ENST00000378442 KIF21BO75037 1637 aa19.38■□□□□ 0.69
CDNF-202ENST00000378442 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
CDNF-202ENST00000378442 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
CDNF-202ENST00000378442 BIVM-ERCC5R4GMW8 1640 aa19.35■□□□□ 0.69
CDNF-202ENST00000378442 CFTRP13569 1480 aa19.31■□□□□ 0.68
CDNF-202ENST00000378442 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
CDNF-202ENST00000378442 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
CDNF-202ENST00000378442 CUX1P39880 1505 aa19.17■□□□□ 0.66
CDNF-202ENST00000378442 ERICH3Q5RHP9 1530 aa19.15■□□□□ 0.66
CDNF-202ENST00000378442 PPARGC1BQ86YN6 1023 aaKnown RBP19.15■□□□□ 0.66
CDNF-202ENST00000378442 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
CDNF-202ENST00000378442 PRXQ9BXM0 1461 aa19.11■□□□□ 0.65
CDNF-202ENST00000378442 CLIP1P30622 1438 aa19.1■□□□□ 0.65
CDNF-202ENST00000378442 RAPGEF2Q9Y4G8 1499 aa19.1■□□□□ 0.65
CDNF-202ENST00000378442 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
CDNF-202ENST00000378442 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
CDNF-202ENST00000378442 FOXD1Q16676 465 aa19.07■□□□□ 0.64
CDNF-202ENST00000378442 VPS8Q8N3P4 1428 aa19.04■□□□□ 0.64
CDNF-202ENST00000378442 FANCD2Q9BXW9 1451 aa18.87■□□□□ 0.61
CDNF-202ENST00000378442 APLP2Q06481 763 aa18.85■□□□□ 0.61
CDNF-202ENST00000378442 CUX2O14529 1486 aa18.85■□□□□ 0.61
CDNF-202ENST00000378442 FGD5Q6ZNL6 1462 aa18.85■□□□□ 0.61
CDNF-202ENST00000378442 IGF1RP08069 1367 aa18.84■□□□□ 0.61
CDNF-202ENST00000378442 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
CDNF-202ENST00000378442 CCER1Q8TC90 406 aaPredicted RBP18.84■□□□□ 0.61
CDNF-202ENST00000378442 DNMBPQ6XZF7 1577 aa18.83■□□□□ 0.61
CDNF-202ENST00000378442 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
CDNF-202ENST00000378442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
CDNF-202ENST00000378442 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
CDNF-202ENST00000378442 ABCA10Q8WWZ4 1543 aa18.75■□□□□ 0.59
CDNF-202ENST00000378442 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
CDNF-202ENST00000378442 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
CDNF-202ENST00000378442 ARHGAP35Q9NRY4 1499 aa18.72■□□□□ 0.59
CDNF-202ENST00000378442 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
CDNF-202ENST00000378442 MAP3K1Q13233 1512 aa18.67■□□□□ 0.58
CDNF-202ENST00000378442 NESP48681 1621 aa18.66■□□□□ 0.58
CDNF-202ENST00000378442 CUL7Q14999 1698 aa18.64■□□□□ 0.57
CDNF-202ENST00000378442 PDS5BQ9NTI5 1447 aa18.64■□□□□ 0.57
CDNF-202ENST00000378442 RANGAP1P46060 587 aaPredicted RBP18.64■□□□□ 0.57
CDNF-202ENST00000378442 RAD54L2Q9Y4B4 1467 aa18.6■□□□□ 0.57
CDNF-202ENST00000378442 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
CDNF-202ENST00000378442 RRBP1Q9P2E9 1410 aaKnown RBP18.59■□□□□ 0.57
CDNF-202ENST00000378442 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
CDNF-202ENST00000378442 FHAD1B1AJZ9 1412 aa18.56■□□□□ 0.56
CDNF-202ENST00000378442 EFCAB5A4FU69 1503 aa18.55■□□□□ 0.56
CDNF-202ENST00000378442 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
CDNF-202ENST00000378442 KANK4Q5T7N3 995 aaPredicted RBP18.54■□□□□ 0.56
CDNF-202ENST00000378442 CLSPNQ9HAW4 1339 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms