RNA–Protein interactions for RNA: ENST00000378206.5

DFFB-204, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-204ENST00000378206 NISCHQ9Y2I1 1504 aa30.99■■■□□ 2.55
DFFB-204ENST00000378206 SHROOM4Q9ULL8 1493 aa27.04■■□□□ 1.92
DFFB-204ENST00000378206 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
DFFB-204ENST00000378206 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
DFFB-204ENST00000378206 ZCCHC6Q5VYS8 1495 aaKnown RBP26.13■■□□□ 1.77
DFFB-204ENST00000378206 CCDC180Q9P1Z9 1646 aa25.96■■□□□ 1.75
DFFB-204ENST00000378206 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
DFFB-204ENST00000378206 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
DFFB-204ENST00000378206 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
DFFB-204ENST00000378206 LOC105371045A0A1W2PR82 267 aa25.08■■□□□ 1.6
DFFB-204ENST00000378206 PCGF6Q9BYE7 350 aa24.95■■□□□ 1.58
DFFB-204ENST00000378206 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
DFFB-204ENST00000378206 ABCC9O60706 1549 aa24.75■■□□□ 1.55
DFFB-204ENST00000378206 HRCP23327 699 aa24.67■■□□□ 1.54
DFFB-204ENST00000378206 RSF1Q96T23 1441 aaPredicted RBP24.67■■□□□ 1.54
DFFB-204ENST00000378206 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
DFFB-204ENST00000378206 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
DFFB-204ENST00000378206 PPARGC1BQ86YN6 1023 aaKnown RBP24.55■■□□□ 1.52
DFFB-204ENST00000378206 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
DFFB-204ENST00000378206 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.5
DFFB-204ENST00000378206 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
DFFB-204ENST00000378206 MROH2BQ7Z745 1585 aa24.24■■□□□ 1.47
DFFB-204ENST00000378206 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
DFFB-204ENST00000378206 NACADO15069 1562 aa24.18■■□□□ 1.46
DFFB-204ENST00000378206 WIZO95785 1651 aa24.07■■□□□ 1.44
DFFB-204ENST00000378206 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
DFFB-204ENST00000378206 TTBK1Q5TCY1 1321 aaPredicted RBP23.76■■□□□ 1.39
DFFB-204ENST00000378206 BAZ1AQ9NRL2 1556 aaPredicted RBP23.71■■□□□ 1.39
DFFB-204ENST00000378206 ABCC8Q09428 1581 aa23.66■■□□□ 1.38
DFFB-204ENST00000378206 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.37
DFFB-204ENST00000378206 SMARCA4P51532 1647 aa23.53■■□□□ 1.36
DFFB-204ENST00000378206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
DFFB-204ENST00000378206 SOGA1O94964 1423 aa23.51■■□□□ 1.35
DFFB-204ENST00000378206 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
DFFB-204ENST00000378206 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
DFFB-204ENST00000378206 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
DFFB-204ENST00000378206 SMARCA2P51531 1590 aa23.45■■□□□ 1.34
DFFB-204ENST00000378206 ZEB1P37275 1124 aaPredicted RBP23.45■■□□□ 1.34
DFFB-204ENST00000378206 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
DFFB-204ENST00000378206 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
DFFB-204ENST00000378206 CSRNP3Q8WYN3 585 aa23.36■■□□□ 1.33
DFFB-204ENST00000378206 CCER1Q8TC90 406 aaPredicted RBP23.33■■□□□ 1.33
DFFB-204ENST00000378206 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
DFFB-204ENST00000378206 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
DFFB-204ENST00000378206 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
DFFB-204ENST00000378206 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
DFFB-204ENST00000378206 TNIKQ9UKE5 1360 aa23.13■■□□□ 1.29
DFFB-204ENST00000378206 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
DFFB-204ENST00000378206 BAZ1BQ9UIG0 1483 aaKnown RBP23■■□□□ 1.27
DFFB-204ENST00000378206 HNRNPUL2Q1KMD3 747 aaKnown RBP23■■□□□ 1.27
DFFB-204ENST00000378206 SYNJ1O43426 1573 aa23■■□□□ 1.27
DFFB-204ENST00000378206 GOLGA3Q08378 1498 aa22.96■■□□□ 1.27
DFFB-204ENST00000378206 EEA1Q15075 1411 aa22.95■■□□□ 1.26
DFFB-204ENST00000378206 PEG3Q9GZU2 1588 aa22.91■■□□□ 1.26
DFFB-204ENST00000378206 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
DFFB-204ENST00000378206 RAPGEF2Q9Y4G8 1499 aa22.85■■□□□ 1.25
DFFB-204ENST00000378206 CLIP1P30622 1438 aa22.84■■□□□ 1.25
DFFB-204ENST00000378206 DIEXFQ68CQ4 756 aaKnown RBP22.81■■□□□ 1.24
DFFB-204ENST00000378206 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
DFFB-204ENST00000378206 APLP2Q06481 763 aa22.77■■□□□ 1.24
DFFB-204ENST00000378206 NEUROD1Q13562 356 aa22.67■■□□□ 1.22
DFFB-204ENST00000378206 VPS8Q8N3P4 1428 aa22.63■■□□□ 1.21
DFFB-204ENST00000378206 KIF21BO75037 1637 aa22.62■■□□□ 1.21
DFFB-204ENST00000378206 KANK4Q5T7N3 995 aaPredicted RBP22.62■■□□□ 1.21
DFFB-204ENST00000378206 ZNF316A6NFI3 1004 aaPredicted RBP22.57■■□□□ 1.2
DFFB-204ENST00000378206 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
DFFB-204ENST00000378206 ACIN1Q9UKV3 1341 aaKnown RBP22.54■■□□□ 1.2
DFFB-204ENST00000378206 NCAPD3P42695 1498 aa22.53■■□□□ 1.2
DFFB-204ENST00000378206 YTHDC1Q96MU7 727 aaKnown RBP22.53■■□□□ 1.2
DFFB-204ENST00000378206 CUX1P39880 1505 aa22.51■■□□□ 1.19
DFFB-204ENST00000378206 ITGAEP38570 1179 aa22.49■■□□□ 1.19
DFFB-204ENST00000378206 PRXQ9BXM0 1461 aa22.46■■□□□ 1.19
DFFB-204ENST00000378206 GTF3C3Q9Y5Q9 886 aa22.42■■□□□ 1.18
DFFB-204ENST00000378206 MIER1Q8N108 512 aa22.42■■□□□ 1.18
DFFB-204ENST00000378206 ARAP1Q96P48 1450 aa22.41■■□□□ 1.18
DFFB-204ENST00000378206 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
DFFB-204ENST00000378206 CFTRP13569 1480 aa22.39■■□□□ 1.17
DFFB-204ENST00000378206 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
DFFB-204ENST00000378206 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
DFFB-204ENST00000378206 HMGXB3Q12766 1538 aa22.35■■□□□ 1.17
DFFB-204ENST00000378206 CENPBP07199 599 aaPredicted RBP22.31■■□□□ 1.16
DFFB-204ENST00000378206 ATP1B4Q9UN42 357 aaPredicted RBP22.31■■□□□ 1.16
DFFB-204ENST00000378206 IGF1RP08069 1367 aa22.29■■□□□ 1.16
DFFB-204ENST00000378206 CUX2O14529 1486 aa22.29■■□□□ 1.16
DFFB-204ENST00000378206 ERICH3Q5RHP9 1530 aa22.26■■□□□ 1.15
DFFB-204ENST00000378206 ARHGAP35Q9NRY4 1499 aa22.24■■□□□ 1.15
DFFB-204ENST00000378206 CADPSQ9ULU8 1353 aa22.24■■□□□ 1.15
DFFB-204ENST00000378206 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
DFFB-204ENST00000378206 CARMIL1Q5VZK9 1371 aa22.18■■□□□ 1.14
DFFB-204ENST00000378206 FGD5Q6ZNL6 1462 aa22.14■■□□□ 1.13
DFFB-204ENST00000378206 DNAJC5BQ9UF47 199 aa22.12■■□□□ 1.13
DFFB-204ENST00000378206 CCNB3Q8WWL7 1395 aa22.11■■□□□ 1.13
DFFB-204ENST00000378206 FAM50AQ14320 339 aaKnown RBP22.1■■□□□ 1.13
DFFB-204ENST00000378206 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
DFFB-204ENST00000378206 NESP48681 1621 aa22.06■■□□□ 1.12
DFFB-204ENST00000378206 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
DFFB-204ENST00000378206 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
DFFB-204ENST00000378206 FANCD2Q9BXW9 1451 aa22.02■■□□□ 1.11
DFFB-204ENST00000378206 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
DFFB-204ENST00000378206 PHLDB1Q86UU1 1377 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms