RNA–Protein interactions for RNA: ENST00000377943.9

SNRPB2-202, Transcript of small nuclear ribonucleoprotein polypeptide B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPB2, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB2-202ENST00000377943 AEBP2Q6ZN18 517 aaPredicted RBP25.2■■□□□ 1.62
SNRPB2-202ENST00000377943 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
SNRPB2-202ENST00000377943 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
SNRPB2-202ENST00000377943 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
SNRPB2-202ENST00000377943 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
SNRPB2-202ENST00000377943 FOXD1Q16676 465 aa19.85■□□□□ 0.77
SNRPB2-202ENST00000377943 PPP6R1Q9UPN7 881 aa19.07■□□□□ 0.64
SNRPB2-202ENST00000377943 ADRA2BP18089 450 aa19.04■□□□□ 0.64
SNRPB2-202ENST00000377943 POTEDQ86YR6 584 aa18.89■□□□□ 0.62
SNRPB2-202ENST00000377943 PIAS4Q8N2W9 510 aaPredicted RBP18.7■□□□□ 0.58
SNRPB2-202ENST00000377943 MSH5O43196 834 aa18.32■□□□□ 0.52
SNRPB2-202ENST00000377943 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
SNRPB2-202ENST00000377943 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
SNRPB2-202ENST00000377943 MAPK8IP2Q13387 824 aaPredicted RBP17.28■□□□□ 0.36
SNRPB2-202ENST00000377943 KCNA4P22459 653 aa17.11■□□□□ 0.33
SNRPB2-202ENST00000377943 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
SNRPB2-202ENST00000377943 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
SNRPB2-202ENST00000377943 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
SNRPB2-202ENST00000377943 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
SNRPB2-202ENST00000377943 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.27
SNRPB2-202ENST00000377943 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
SNRPB2-202ENST00000377943 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
SNRPB2-202ENST00000377943 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
SNRPB2-202ENST00000377943 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
SNRPB2-202ENST00000377943 SLC4A2P04920 1241 aa15.92■□□□□ 0.14
SNRPB2-202ENST00000377943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■□□□□ 8.9
SNRPB2-202ENST00000377943 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
SNRPB2-202ENST00000377943 ZBTB22O15209 634 aa15.76■□□□□ 0.11
SNRPB2-202ENST00000377943 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
SNRPB2-202ENST00000377943 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
SNRPB2-202ENST00000377943 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
SNRPB2-202ENST00000377943 U3KPZ7 1027 aaPredicted RBP15.66■□□□□ 0.1
SNRPB2-202ENST00000377943 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
SNRPB2-202ENST00000377943 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
SNRPB2-202ENST00000377943 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
SNRPB2-202ENST00000377943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
SNRPB2-202ENST00000377943 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
SNRPB2-202ENST00000377943 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
SNRPB2-202ENST00000377943 APLP2Q06481 763 aa15.28■□□□□ 0.04
SNRPB2-202ENST00000377943 ATXN8OSP0DMR3 200 aa15.24■□□□□ 0.03
SNRPB2-202ENST00000377943 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
SNRPB2-202ENST00000377943 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
SNRPB2-202ENST00000377943 CAPN15O75808 1086 aa15.14■□□□□ 0.01
SNRPB2-202ENST00000377943 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
SNRPB2-202ENST00000377943 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
SNRPB2-202ENST00000377943 DSG3P32926 999 aa14.93□□□□□ -0.02
SNRPB2-202ENST00000377943 ABCB7O75027 752 aa14.85□□□□□ -0.03
SNRPB2-202ENST00000377943 POLA2Q14181 598 aa14.81□□□□□ -0.04
SNRPB2-202ENST00000377943 POTEHQ6S545 545 aa14.65□□□□□ -0.06
SNRPB2-202ENST00000377943 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
SNRPB2-202ENST00000377943 FBLN2P98095 1184 aa14.5□□□□□ -0.09
SNRPB2-202ENST00000377943 MKRN4PQ13434 485 aaPredicted RBP14.5□□□□□ -0.09
SNRPB2-202ENST00000377943 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
SNRPB2-202ENST00000377943 RBM42Q9BTD8 480 aaKnown RBP14.22□□□□□ -0.13
SNRPB2-202ENST00000377943 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
SNRPB2-202ENST00000377943 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
SNRPB2-202ENST00000377943 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
SNRPB2-202ENST00000377943 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
SNRPB2-202ENST00000377943 FKBP8Q14318 412 aa14.11□□□□□ -0.15
SNRPB2-202ENST00000377943 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
SNRPB2-202ENST00000377943 SSUH2Q9Y2M2 353 aa14.09□□□□□ -0.15
SNRPB2-202ENST00000377943 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
SNRPB2-202ENST00000377943 PROM2Q8N271 834 aa13.95□□□□□ -0.18
SNRPB2-202ENST00000377943 PABPN1Q86U42 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNRPB2-202ENST00000377943 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
SNRPB2-202ENST00000377943 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
SNRPB2-202ENST00000377943 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
SNRPB2-202ENST00000377943 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
SNRPB2-202ENST00000377943 CLEC11AQ9Y240 323 aa13.68□□□□□ -0.22
SNRPB2-202ENST00000377943 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
SNRPB2-202ENST00000377943 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
SNRPB2-202ENST00000377943 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
SNRPB2-202ENST00000377943 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNRPB2-202ENST00000377943 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
SNRPB2-202ENST00000377943 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
SNRPB2-202ENST00000377943 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
SNRPB2-202ENST00000377943 MIER1Q8N108 512 aa13.39□□□□□ -0.27
SNRPB2-202ENST00000377943 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
SNRPB2-202ENST00000377943 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
SNRPB2-202ENST00000377943 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
SNRPB2-202ENST00000377943 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
SNRPB2-202ENST00000377943 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
SNRPB2-202ENST00000377943 MNX1P50219 401 aaPredicted RBP13.29□□□□□ -0.28
SNRPB2-202ENST00000377943 IFNLR1Q8IU57 520 aaPredicted RBP13.27□□□□□ -0.29
SNRPB2-202ENST00000377943 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
SNRPB2-202ENST00000377943 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
SNRPB2-202ENST00000377943 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
SNRPB2-202ENST00000377943 NPM1P06748 294 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNRPB2-202ENST00000377943 SPOCK2Q92563 424 aa13.11□□□□□ -0.31
SNRPB2-202ENST00000377943 NUBP1P53384 320 aa13.09□□□□□ -0.31
SNRPB2-202ENST00000377943 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
SNRPB2-202ENST00000377943 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
SNRPB2-202ENST00000377943 HAX1O00165 279 aa13□□□□□ -0.33
SNRPB2-202ENST00000377943 CD44P16070 742 aaKnown RBP13□□□□□ -0.33
SNRPB2-202ENST00000377943 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
SNRPB2-202ENST00000377943 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
SNRPB2-202ENST00000377943 TSPYL2Q9H2G4 693 aaPredicted RBP12.94□□□□□ -0.34
SNRPB2-202ENST00000377943 EVX2Q03828 476 aa12.92□□□□□ -0.34
SNRPB2-202ENST00000377943 GSE1Q14687 1217 aa12.92□□□□□ -0.34
SNRPB2-202ENST00000377943 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms