RNA–Protein interactions for RNA: ENST00000377799.7

TRDMT1-203, Transcript of tRNA aspartic acid methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRDMT1, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDMT1-203ENST00000377799 NISCHQ9Y2I1 1504 aa29.14■■■□□ 2.25
TRDMT1-203ENST00000377799 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
TRDMT1-203ENST00000377799 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
TRDMT1-203ENST00000377799 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
TRDMT1-203ENST00000377799 CCDC180Q9P1Z9 1646 aa24.65■■□□□ 1.54
TRDMT1-203ENST00000377799 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
TRDMT1-203ENST00000377799 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
TRDMT1-203ENST00000377799 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
TRDMT1-203ENST00000377799 ABCC9O60706 1549 aa23.52■■□□□ 1.35
TRDMT1-203ENST00000377799 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
TRDMT1-203ENST00000377799 MYO15BQ96JP2 1530 aa23.24■■□□□ 1.31
TRDMT1-203ENST00000377799 LOC105371045A0A1W2PR82 267 aa23.09■■□□□ 1.29
TRDMT1-203ENST00000377799 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
TRDMT1-203ENST00000377799 NACADO15069 1562 aa23.02■■□□□ 1.28
TRDMT1-203ENST00000377799 TRIM41Q8WV44 630 aa23■■□□□ 1.27
TRDMT1-203ENST00000377799 PCGF6Q9BYE7 350 aa22.96■■□□□ 1.27
TRDMT1-203ENST00000377799 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
TRDMT1-203ENST00000377799 EHMT2Q96KQ7 1210 aa22.89■■□□□ 1.26
TRDMT1-203ENST00000377799 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
TRDMT1-203ENST00000377799 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
TRDMT1-203ENST00000377799 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
TRDMT1-203ENST00000377799 PABPN1Q86U42 306 aaKnown RBP eCLIP22.62■■□□□ 1.21
TRDMT1-203ENST00000377799 HRCP23327 699 aa22.58■■□□□ 1.21
TRDMT1-203ENST00000377799 WIZO95785 1651 aa22.51■■□□□ 1.19
TRDMT1-203ENST00000377799 TRIM26Q12899 539 aaPredicted RBP22.44■■□□□ 1.18
TRDMT1-203ENST00000377799 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
TRDMT1-203ENST00000377799 PPARGC1BQ86YN6 1023 aaKnown RBP22.26■■□□□ 1.15
TRDMT1-203ENST00000377799 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
TRDMT1-203ENST00000377799 CCDC88BA6NC98 1476 aa22.15■■□□□ 1.14
TRDMT1-203ENST00000377799 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
TRDMT1-203ENST00000377799 UNC13AQ9UPW8 1703 aa22.1■■□□□ 1.13
TRDMT1-203ENST00000377799 TTBK1Q5TCY1 1321 aaPredicted RBP22.07■■□□□ 1.12
TRDMT1-203ENST00000377799 UBTFP17480 764 aaKnown RBP22.05■■□□□ 1.12
TRDMT1-203ENST00000377799 ABCC8Q09428 1581 aa22.04■■□□□ 1.12
TRDMT1-203ENST00000377799 SMARCA2P51531 1590 aa21.98■■□□□ 1.11
TRDMT1-203ENST00000377799 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
TRDMT1-203ENST00000377799 CSRNP3Q8WYN3 585 aa21.91■■□□□ 1.1
TRDMT1-203ENST00000377799 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
TRDMT1-203ENST00000377799 SOGA1O94964 1423 aa21.86■■□□□ 1.09
TRDMT1-203ENST00000377799 RANGAP1P46060 587 aaPredicted RBP21.83■■□□□ 1.08
TRDMT1-203ENST00000377799 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
TRDMT1-203ENST00000377799 EIF4G1Q04637 1599 aaKnown RBP21.79■■□□□ 1.08
TRDMT1-203ENST00000377799 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
TRDMT1-203ENST00000377799 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.08
TRDMT1-203ENST00000377799 CCER1Q8TC90 406 aaPredicted RBP21.73■■□□□ 1.07
TRDMT1-203ENST00000377799 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
TRDMT1-203ENST00000377799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
TRDMT1-203ENST00000377799 CEP162Q5TB80 1403 aa21.69■■□□□ 1.06
TRDMT1-203ENST00000377799 EEA1Q15075 1411 aa21.68■■□□□ 1.06
TRDMT1-203ENST00000377799 TNIKQ9UKE5 1360 aa21.64■■□□□ 1.05
TRDMT1-203ENST00000377799 APLP2Q06481 763 aa21.62■■□□□ 1.05
TRDMT1-203ENST00000377799 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
TRDMT1-203ENST00000377799 GOLGA3Q08378 1498 aa21.56■■□□□ 1.04
TRDMT1-203ENST00000377799 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
TRDMT1-203ENST00000377799 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.03
TRDMT1-203ENST00000377799 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
TRDMT1-203ENST00000377799 CLIP1P30622 1438 aa21.4■■□□□ 1.02
TRDMT1-203ENST00000377799 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
TRDMT1-203ENST00000377799 RAPGEF2Q9Y4G8 1499 aa21.3■■□□□ 1
TRDMT1-203ENST00000377799 HMGXB3Q12766 1538 aa21.22■□□□□ 0.99
TRDMT1-203ENST00000377799 TOP2BQ02880 1626 aa21.2■□□□□ 0.98
TRDMT1-203ENST00000377799 KIF21BO75037 1637 aa21.19■□□□□ 0.98
TRDMT1-203ENST00000377799 KIF27Q86VH2 1401 aa21.18■□□□□ 0.98
TRDMT1-203ENST00000377799 VPS8Q8N3P4 1428 aa21.17■□□□□ 0.98
TRDMT1-203ENST00000377799 CFTRP13569 1480 aa21.13■□□□□ 0.97
TRDMT1-203ENST00000377799 ATP1B4Q9UN42 357 aaPredicted RBP21.1■□□□□ 0.97
TRDMT1-203ENST00000377799 CUX1P39880 1505 aa21.1■□□□□ 0.97
TRDMT1-203ENST00000377799 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.97
TRDMT1-203ENST00000377799 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
TRDMT1-203ENST00000377799 ITGAEP38570 1179 aa21.04■□□□□ 0.96
TRDMT1-203ENST00000377799 CUX2O14529 1486 aa21.03■□□□□ 0.96
TRDMT1-203ENST00000377799 BIVM-ERCC5R4GMW8 1640 aa21.02■□□□□ 0.96
TRDMT1-203ENST00000377799 PRXQ9BXM0 1461 aa21■□□□□ 0.95
TRDMT1-203ENST00000377799 P3H3Q8IVL6 736 aa20.99■□□□□ 0.95
TRDMT1-203ENST00000377799 KANK4Q5T7N3 995 aaPredicted RBP20.97■□□□□ 0.95
TRDMT1-203ENST00000377799 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
TRDMT1-203ENST00000377799 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
TRDMT1-203ENST00000377799 CARMIL1Q5VZK9 1371 aa20.92■□□□□ 0.94
TRDMT1-203ENST00000377799 ZNF316A6NFI3 1004 aaPredicted RBP20.91■□□□□ 0.94
TRDMT1-203ENST00000377799 IGF1RP08069 1367 aa20.9■□□□□ 0.94
TRDMT1-203ENST00000377799 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
TRDMT1-203ENST00000377799 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
TRDMT1-203ENST00000377799 ARAP1Q96P48 1450 aa20.85■□□□□ 0.93
TRDMT1-203ENST00000377799 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
TRDMT1-203ENST00000377799 NESP48681 1621 aa20.77■□□□□ 0.92
TRDMT1-203ENST00000377799 CENPBP07199 599 aaPredicted RBP20.77■□□□□ 0.92
TRDMT1-203ENST00000377799 ARHGAP35Q9NRY4 1499 aa20.76■□□□□ 0.91
TRDMT1-203ENST00000377799 YTHDC1Q96MU7 727 aaKnown RBP20.75■□□□□ 0.91
TRDMT1-203ENST00000377799 RAD54L2Q9Y4B4 1467 aa20.74■□□□□ 0.91
TRDMT1-203ENST00000377799 CCNB3Q8WWL7 1395 aa20.69■□□□□ 0.9
TRDMT1-203ENST00000377799 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
TRDMT1-203ENST00000377799 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
TRDMT1-203ENST00000377799 TDRD9Q8NDG6 1382 aaKnown RBP20.65■□□□□ 0.9
TRDMT1-203ENST00000377799 PRDM2Q13029 1718 aa20.63■□□□□ 0.89
TRDMT1-203ENST00000377799 ACIN1Q9UKV3 1341 aaKnown RBP20.63■□□□□ 0.89
TRDMT1-203ENST00000377799 TOPBP1Q92547 1522 aa20.62■□□□□ 0.89
TRDMT1-203ENST00000377799 NEUROD1Q13562 356 aa20.62■□□□□ 0.89
TRDMT1-203ENST00000377799 POLA1P09884 1462 aaPredicted RBP20.61■□□□□ 0.89
TRDMT1-203ENST00000377799 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
TRDMT1-203ENST00000377799 FHOD3Q2V2M9 1422 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms