RNA–Protein interactions for RNA: ENST00000377264.7

ATG2A-201, Transcript of autophagy related 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG2A, Length 6,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2A-201ENST00000377264 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
ATG2A-201ENST00000377264 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
ATG2A-201ENST00000377264 PELP1Q8IZL8 1130 aaKnown RBP24.12■■□□□ 1.45
ATG2A-201ENST00000377264 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
ATG2A-201ENST00000377264 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
ATG2A-201ENST00000377264 EHMT2Q96KQ7 1210 aa23.97■■□□□ 1.43
ATG2A-201ENST00000377264 FAM9AQ8IZU1 332 aaPredicted RBP23.75■■□□□ 1.39
ATG2A-201ENST00000377264 APLP2Q06481 763 aa23.7■■□□□ 1.38
ATG2A-201ENST00000377264 ERICH6Q7L0X2 663 aa23.26■■□□□ 1.31
ATG2A-201ENST00000377264 TTBK1Q5TCY1 1321 aaPredicted RBP23.19■■□□□ 1.3
ATG2A-201ENST00000377264 RANGAP1P46060 587 aaPredicted RBP23.06■■□□□ 1.28
ATG2A-201ENST00000377264 CCER1Q8TC90 406 aaPredicted RBP23.05■■□□□ 1.28
ATG2A-201ENST00000377264 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
ATG2A-201ENST00000377264 PCGF6Q9BYE7 350 aa22.99■■□□□ 1.27
ATG2A-201ENST00000377264 CENPBP07199 599 aaPredicted RBP22.96■■□□□ 1.27
ATG2A-201ENST00000377264 ZEB1P37275 1124 aaPredicted RBP22.7■■□□□ 1.22
ATG2A-201ENST00000377264 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
ATG2A-201ENST00000377264 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
ATG2A-201ENST00000377264 NEFLP07196 543 aa22.61■■□□□ 1.21
ATG2A-201ENST00000377264 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
ATG2A-201ENST00000377264 MYT1LQ9UL68 1186 aa22.46■■□□□ 1.19
ATG2A-201ENST00000377264 MYT1Q01538 1121 aa22.35■■□□□ 1.17
ATG2A-201ENST00000377264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
ATG2A-201ENST00000377264 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
ATG2A-201ENST00000377264 DAXXQ9UER7 740 aaPredicted RBP22.17■■□□□ 1.14
ATG2A-201ENST00000377264 PPARGC1BQ86YN6 1023 aaKnown RBP22.08■■□□□ 1.13
ATG2A-201ENST00000377264 POLR3GLQ9BT43 218 aa22.01■■□□□ 1.11
ATG2A-201ENST00000377264 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
ATG2A-201ENST00000377264 ITGAEP38570 1179 aa21.94■■□□□ 1.1
ATG2A-201ENST00000377264 TRIM26Q12899 539 aaPredicted RBP21.81■■□□□ 1.08
ATG2A-201ENST00000377264 CNGB1Q14028 1251 aaPredicted RBP21.79■■□□□ 1.08
ATG2A-201ENST00000377264 SLC4A1APQ9BWU0 796 aaKnown RBP21.79■■□□□ 1.08
ATG2A-201ENST00000377264 HRCP23327 699 aa21.68■■□□□ 1.06
ATG2A-201ENST00000377264 ZNF316A6NFI3 1004 aaPredicted RBP21.62■■□□□ 1.05
ATG2A-201ENST00000377264 CLSPNQ9HAW4 1339 aa21.57■■□□□ 1.04
ATG2A-201ENST00000377264 RTL5Q5HYW3 569 aaPredicted RBP21.57■■□□□ 1.04
ATG2A-201ENST00000377264 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.032e-7■■■□□ 18.5
ATG2A-201ENST00000377264 ABCC9O60706 1549 aa21.46■■□□□ 1.03
ATG2A-201ENST00000377264 FBLN2P98095 1184 aa21.41■■□□□ 1.02
ATG2A-201ENST00000377264 FAM50AQ14320 339 aaKnown RBP21.39■■□□□ 1.02
ATG2A-201ENST00000377264 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
ATG2A-201ENST00000377264 TRIM52Q96A61 297 aa21.36■■□□□ 1.01
ATG2A-201ENST00000377264 DIEXFQ68CQ4 756 aaKnown RBP21.28■■□□□ 1
ATG2A-201ENST00000377264 BCANQ96GW7 911 aa21.22■□□□□ 0.99
ATG2A-201ENST00000377264 ZBTB47Q9UFB7 747 aaPredicted RBP21.14■□□□□ 0.97
ATG2A-201ENST00000377264 NEUROD1Q13562 356 aa21.12■□□□□ 0.97
ATG2A-201ENST00000377264 SLC24A1O60721 1099 aa21.11■□□□□ 0.97
ATG2A-201ENST00000377264 ZNF326Q5BKZ1 582 aaKnown RBP21.1■□□□□ 0.97
ATG2A-201ENST00000377264 CDK11AQ9UQ88 783 aaPredicted RBP21.04■□□□□ 0.96
ATG2A-201ENST00000377264 ANP32CO43423 234 aa21■□□□□ 0.95
ATG2A-201ENST00000377264 ESF1Q9H501 851 aaKnown RBP21■□□□□ 0.95
ATG2A-201ENST00000377264 BCL11AQ9H165 835 aa20.99■□□□□ 0.95
ATG2A-201ENST00000377264 CANXP27824 592 aaKnown RBP20.96■□□□□ 0.95
ATG2A-201ENST00000377264 ARID3CA6NKF2 412 aa20.95■□□□□ 0.94
ATG2A-201ENST00000377264 NEFMP07197 916 aa20.93■□□□□ 0.94
ATG2A-201ENST00000377264 GTF3C3Q9Y5Q9 886 aa20.93■□□□□ 0.94
ATG2A-201ENST00000377264 P3H3Q8IVL6 736 aa20.87■□□□□ 0.93
ATG2A-201ENST00000377264 ZNF777Q9ULD5 760 aaPredicted RBP20.86■□□□□ 0.93
ATG2A-201ENST00000377264 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
ATG2A-201ENST00000377264 NPM1P06748 294 aaKnown RBP eCLIP20.81■□□□□ 0.92
ATG2A-201ENST00000377264 STAG3Q9UJ98 1225 aa20.8■□□□□ 0.92
ATG2A-201ENST00000377264 ANP32AP39687 249 aaKnown RBP20.73■□□□□ 0.91
ATG2A-201ENST00000377264 CHGAP10645 457 aaKnown RBP20.7■□□□□ 0.9
ATG2A-201ENST00000377264 NPM2Q86SE8 214 aaKnown RBP20.68■□□□□ 0.9
ATG2A-201ENST00000377264 ANP32BQ92688 251 aaKnown RBP20.58■□□□□ 0.89
ATG2A-201ENST00000377264 EIF5BO60841 1220 aaKnown RBP20.53■□□□□ 0.88
ATG2A-201ENST00000377264 HSP90AA1P07900 732 aaKnown RBP20.52■□□□□ 0.88
ATG2A-201ENST00000377264 CSRNP3Q8WYN3 585 aa20.51■□□□□ 0.87
ATG2A-201ENST00000377264 ACIN1Q9UKV3 1341 aaKnown RBP20.48■□□□□ 0.87
ATG2A-201ENST00000377264 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
ATG2A-201ENST00000377264 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
ATG2A-201ENST00000377264 UPF2Q9HAU5 1272 aaKnown RBP20.41■□□□□ 0.86
ATG2A-201ENST00000377264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.4■□□□□ 0.861e-6■□□□□ 9.6
ATG2A-201ENST00000377264 FKBP8Q14318 412 aa20.4■□□□□ 0.86
ATG2A-201ENST00000377264 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
ATG2A-201ENST00000377264 A0A0G2JS52 829 aa20.33■□□□□ 0.85
ATG2A-201ENST00000377264 TONSLQ96HA7 1378 aa20.29■□□□□ 0.84
ATG2A-201ENST00000377264 HNRNPUQ00839 825 aaKnown RBP eCLIP20.28■□□□□ 0.84
ATG2A-201ENST00000377264 FAM9BQ8IZU0 186 aa20.28■□□□□ 0.84
ATG2A-201ENST00000377264 GLIPR1L2Q4G1C9 344 aa20.27■□□□□ 0.84
ATG2A-201ENST00000377264 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
ATG2A-201ENST00000377264 TSPY4P0CV99 314 aa20.25■□□□□ 0.83
ATG2A-201ENST00000377264 TSPY10P0CW01 314 aa20.25■□□□□ 0.83
ATG2A-201ENST00000377264 CHIC2Q9UKJ5 165 aa20.23■□□□□ 0.83
ATG2A-201ENST00000377264 ARXQ96QS3 562 aa20.22■□□□□ 0.83
ATG2A-201ENST00000377264 ZBTB7CA1YPR0 619 aa20.21■□□□□ 0.83
ATG2A-201ENST00000377264 NBR1Q14596 966 aa20.21■□□□□ 0.83
ATG2A-201ENST00000377264 C14orf37Q86TY3 774 aa20.19■□□□□ 0.82
ATG2A-201ENST00000377264 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
ATG2A-201ENST00000377264 PLEKHG5O94827 1062 aa20.17■□□□□ 0.82
ATG2A-201ENST00000377264 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.17■□□□□ 0.82
ATG2A-201ENST00000377264 CCDC136Q96JN2 1154 aa20.16■□□□□ 0.82
ATG2A-201ENST00000377264 DDX10Q13206 875 aaKnown RBP20.16■□□□□ 0.82
ATG2A-201ENST00000377264 ARID4BQ4LE39 1312 aaPredicted RBP20.14■□□□□ 0.81
ATG2A-201ENST00000377264 KDM2AQ9Y2K7 1162 aa20.13■□□□□ 0.81
ATG2A-201ENST00000377264 KCNH8Q96L42 1107 aa20.12■□□□□ 0.81
ATG2A-201ENST00000377264 TMC1Q8TDI8 760 aa20.12■□□□□ 0.81
ATG2A-201ENST00000377264 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
ATG2A-201ENST00000377264 HAP1P54257 671 aaPredicted RBP20.1■□□□□ 0.81
ATG2A-201ENST00000377264 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms