RNA–Protein interactions for RNA: ENST00000376199.6

FOXP3-202, Transcript of forkhead box P3, humanhuman

TSL 2 BASIC

Gene FOXP3, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3-202ENST00000376199 NISCHQ9Y2I1 1504 aa34.03■■■■□ 3.04
FOXP3-202ENST00000376199 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
FOXP3-202ENST00000376199 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
FOXP3-202ENST00000376199 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
FOXP3-202ENST00000376199 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
FOXP3-202ENST00000376199 DCAF1Q9Y4B6 1507 aa28.04■■■□□ 2.08
FOXP3-202ENST00000376199 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
FOXP3-202ENST00000376199 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
FOXP3-202ENST00000376199 MYO15BQ96JP2 1530 aa27.28■■□□□ 1.96
FOXP3-202ENST00000376199 ABCC9O60706 1549 aa27.13■■□□□ 1.93
FOXP3-202ENST00000376199 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
FOXP3-202ENST00000376199 NACADO15069 1562 aa26.87■■□□□ 1.89
FOXP3-202ENST00000376199 RSF1Q96T23 1441 aaPredicted RBP26.87■■□□□ 1.89
FOXP3-202ENST00000376199 RB1CC1Q8TDY2 1594 aa26.62■■□□□ 1.85
FOXP3-202ENST00000376199 LOC105371045A0A1W2PR82 267 aa26.55■■□□□ 1.84
FOXP3-202ENST00000376199 HRCP23327 699 aa26.51■■□□□ 1.84
FOXP3-202ENST00000376199 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
FOXP3-202ENST00000376199 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
FOXP3-202ENST00000376199 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.82
FOXP3-202ENST00000376199 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
FOXP3-202ENST00000376199 WIZO95785 1651 aa26.23■■□□□ 1.79
FOXP3-202ENST00000376199 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
FOXP3-202ENST00000376199 TRIM26Q12899 539 aaPredicted RBP26.12■■□□□ 1.77
FOXP3-202ENST00000376199 FAM9AQ8IZU1 332 aaPredicted RBP26.01■■□□□ 1.75
FOXP3-202ENST00000376199 SMARCA4P51532 1647 aa25.93■■□□□ 1.74
FOXP3-202ENST00000376199 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
FOXP3-202ENST00000376199 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
FOXP3-202ENST00000376199 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
FOXP3-202ENST00000376199 PPARGC1BQ86YN6 1023 aaKnown RBP25.8■■□□□ 1.72
FOXP3-202ENST00000376199 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
FOXP3-202ENST00000376199 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
FOXP3-202ENST00000376199 EHMT2Q96KQ7 1210 aa25.68■■□□□ 1.7
FOXP3-202ENST00000376199 BICRAQ9NZM4 1560 aa25.63■■□□□ 1.69
FOXP3-202ENST00000376199 ZEB1P37275 1124 aaPredicted RBP25.61■■□□□ 1.69
FOXP3-202ENST00000376199 ABCC8Q09428 1581 aa25.58■■□□□ 1.69
FOXP3-202ENST00000376199 PABPN1Q86U42 306 aaKnown RBP eCLIP25.54■■□□□ 1.68
FOXP3-202ENST00000376199 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
FOXP3-202ENST00000376199 EEA1Q15075 1411 aa25.4■■□□□ 1.66
FOXP3-202ENST00000376199 SOGA1O94964 1423 aa25.34■■□□□ 1.65
FOXP3-202ENST00000376199 WRNQ14191 1432 aaPredicted RBP eCLIP25.28■■□□□ 1.64
FOXP3-202ENST00000376199 TNIKQ9UKE5 1360 aa25.28■■□□□ 1.64
FOXP3-202ENST00000376199 CSRNP3Q8WYN3 585 aa25.27■■□□□ 1.64
FOXP3-202ENST00000376199 ATAD2BQ9ULI0 1458 aa25.27■■□□□ 1.64
FOXP3-202ENST00000376199 CEP162Q5TB80 1403 aa25.24■■□□□ 1.63
FOXP3-202ENST00000376199 BAZ1BQ9UIG0 1483 aaKnown RBP25.2■■□□□ 1.62
FOXP3-202ENST00000376199 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
FOXP3-202ENST00000376199 GOLGA3Q08378 1498 aa25.14■■□□□ 1.61
FOXP3-202ENST00000376199 UBTFP17480 764 aaKnown RBP25.1■■□□□ 1.61
FOXP3-202ENST00000376199 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
FOXP3-202ENST00000376199 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
FOXP3-202ENST00000376199 KIF21BO75037 1637 aa25■■□□□ 1.59
FOXP3-202ENST00000376199 CCER1Q8TC90 406 aaPredicted RBP24.96■■□□□ 1.59
FOXP3-202ENST00000376199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.95■■□□□ 1.58
FOXP3-202ENST00000376199 DNAJC5BQ9UF47 199 aa24.92■■□□□ 1.58
FOXP3-202ENST00000376199 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
FOXP3-202ENST00000376199 TTBK1Q5TCY1 1321 aaPredicted RBP24.86■■□□□ 1.57
FOXP3-202ENST00000376199 HMGXB3Q12766 1538 aa24.85■■□□□ 1.57
FOXP3-202ENST00000376199 NCAPD3P42695 1498 aa24.84■■□□□ 1.57
FOXP3-202ENST00000376199 CLIP1P30622 1438 aa24.81■■□□□ 1.56
FOXP3-202ENST00000376199 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
FOXP3-202ENST00000376199 RAPGEF2Q9Y4G8 1499 aa24.75■■□□□ 1.55
FOXP3-202ENST00000376199 VPS8Q8N3P4 1428 aa24.72■■□□□ 1.55
FOXP3-202ENST00000376199 ERICH3Q5RHP9 1530 aa24.63■■□□□ 1.53
FOXP3-202ENST00000376199 APLP2Q06481 763 aa24.6■■□□□ 1.53
FOXP3-202ENST00000376199 CFTRP13569 1480 aa24.6■■□□□ 1.53
FOXP3-202ENST00000376199 PRXQ9BXM0 1461 aa24.6■■□□□ 1.53
FOXP3-202ENST00000376199 CUX1P39880 1505 aa24.59■■□□□ 1.53
FOXP3-202ENST00000376199 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
FOXP3-202ENST00000376199 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
FOXP3-202ENST00000376199 HNRNPUL2Q1KMD3 747 aaKnown RBP24.45■■□□□ 1.5
FOXP3-202ENST00000376199 DIEXFQ68CQ4 756 aaKnown RBP24.43■■□□□ 1.5
FOXP3-202ENST00000376199 PRDM2Q13029 1718 aa24.43■■□□□ 1.5
FOXP3-202ENST00000376199 ARAP1Q96P48 1450 aa24.41■■□□□ 1.5
FOXP3-202ENST00000376199 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
FOXP3-202ENST00000376199 PELP1Q8IZL8 1130 aaKnown RBP24.32■■□□□ 1.48
FOXP3-202ENST00000376199 ZNF316A6NFI3 1004 aaPredicted RBP24.32■■□□□ 1.48
FOXP3-202ENST00000376199 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
FOXP3-202ENST00000376199 CUX2O14529 1486 aa24.24■■□□□ 1.47
FOXP3-202ENST00000376199 ARHGAP35Q9NRY4 1499 aa24.21■■□□□ 1.47
FOXP3-202ENST00000376199 IGF1RP08069 1367 aa24.21■■□□□ 1.47
FOXP3-202ENST00000376199 KANK4Q5T7N3 995 aaPredicted RBP24.2■■□□□ 1.46
FOXP3-202ENST00000376199 ACIN1Q9UKV3 1341 aaKnown RBP24.19■■□□□ 1.46
FOXP3-202ENST00000376199 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
FOXP3-202ENST00000376199 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
FOXP3-202ENST00000376199 RRBP1Q9P2E9 1410 aaKnown RBP24.14■■□□□ 1.46
FOXP3-202ENST00000376199 CLSPNQ9HAW4 1339 aa24.14■■□□□ 1.46
FOXP3-202ENST00000376199 CENPBP07199 599 aaPredicted RBP24.13■■□□□ 1.45
FOXP3-202ENST00000376199 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
FOXP3-202ENST00000376199 NEUROD1Q13562 356 aa24.08■■□□□ 1.45
FOXP3-202ENST00000376199 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
FOXP3-202ENST00000376199 DHX57Q6P158 1386 aaKnown RBP24.05■■□□□ 1.44
FOXP3-202ENST00000376199 MAP3K1Q13233 1512 aa24.04■■□□□ 1.44
FOXP3-202ENST00000376199 CCNB3Q8WWL7 1395 aa24.02■■□□□ 1.44
FOXP3-202ENST00000376199 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
FOXP3-202ENST00000376199 TIAM1Q13009 1591 aa23.97■■□□□ 1.43
FOXP3-202ENST00000376199 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
FOXP3-202ENST00000376199 FHAD1B1AJZ9 1412 aa23.92■■□□□ 1.42
FOXP3-202ENST00000376199 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
FOXP3-202ENST00000376199 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
FOXP3-202ENST00000376199 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms