RNA–Protein interactions for RNA: ENST00000375972.7

YME1L1-202, Transcript of YME1 like 1 ATPase, humanhuman

TSL 1 (best) BASIC

Gene YME1L1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1-202ENST00000375972 NISCHQ9Y2I1 1504 aa31.74■■■□□ 2.67
YME1L1-202ENST00000375972 CCDC180Q9P1Z9 1646 aa27.12■■□□□ 1.93
YME1L1-202ENST00000375972 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
YME1L1-202ENST00000375972 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
YME1L1-202ENST00000375972 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
YME1L1-202ENST00000375972 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.79
YME1L1-202ENST00000375972 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
YME1L1-202ENST00000375972 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
YME1L1-202ENST00000375972 CHIC1Q5VXU3 224 aa25.38■■□□□ 1.65
YME1L1-202ENST00000375972 SCRIBQ14160 1630 aa25.32■■□□□ 1.64
YME1L1-202ENST00000375972 ABCC9O60706 1549 aa25.29■■□□□ 1.64
YME1L1-202ENST00000375972 NACADO15069 1562 aa25.15■■□□□ 1.62
YME1L1-202ENST00000375972 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
YME1L1-202ENST00000375972 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
YME1L1-202ENST00000375972 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
YME1L1-202ENST00000375972 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.54
YME1L1-202ENST00000375972 LOC105371045A0A1W2PR82 267 aa24.59■■□□□ 1.53
YME1L1-202ENST00000375972 WIZO95785 1651 aa24.49■■□□□ 1.51
YME1L1-202ENST00000375972 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
YME1L1-202ENST00000375972 BAZ1AQ9NRL2 1556 aaPredicted RBP24.41■■□□□ 1.5
YME1L1-202ENST00000375972 UNC13AQ9UPW8 1703 aa24.36■■□□□ 1.49
YME1L1-202ENST00000375972 PCGF6Q9BYE7 350 aa24.3■■□□□ 1.48
YME1L1-202ENST00000375972 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
YME1L1-202ENST00000375972 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
YME1L1-202ENST00000375972 HRCP23327 699 aa24.14■■□□□ 1.46
YME1L1-202ENST00000375972 PABPN1Q86U42 306 aaKnown RBP eCLIP24.14■■□□□ 1.46
YME1L1-202ENST00000375972 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
YME1L1-202ENST00000375972 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
YME1L1-202ENST00000375972 EIF4G1Q04637 1599 aaKnown RBP24.04■■□□□ 1.44
YME1L1-202ENST00000375972 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
YME1L1-202ENST00000375972 SMARCA2P51531 1590 aa23.98■■□□□ 1.43
YME1L1-202ENST00000375972 EHMT2Q96KQ7 1210 aa23.97■■□□□ 1.43
YME1L1-202ENST00000375972 TRIM26Q12899 539 aaPredicted RBP23.94■■□□□ 1.42
YME1L1-202ENST00000375972 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
YME1L1-202ENST00000375972 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
YME1L1-202ENST00000375972 ATAD2BQ9ULI0 1458 aa23.67■■□□□ 1.38
YME1L1-202ENST00000375972 PPARGC1BQ86YN6 1023 aaKnown RBP23.64■■□□□ 1.37
YME1L1-202ENST00000375972 BAZ1BQ9UIG0 1483 aaKnown RBP23.59■■□□□ 1.37
YME1L1-202ENST00000375972 SOGA1O94964 1423 aa23.58■■□□□ 1.37
YME1L1-202ENST00000375972 WRNQ14191 1432 aaPredicted RBP eCLIP23.51■■□□□ 1.35
YME1L1-202ENST00000375972 EEA1Q15075 1411 aa23.48■■□□□ 1.35
YME1L1-202ENST00000375972 CSRNP3Q8WYN3 585 aa23.47■■□□□ 1.35
YME1L1-202ENST00000375972 RUSC2Q8N2Y8 1516 aa23.47■■□□□ 1.35
YME1L1-202ENST00000375972 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
YME1L1-202ENST00000375972 TNIKQ9UKE5 1360 aa23.37■■□□□ 1.33
YME1L1-202ENST00000375972 CEP162Q5TB80 1403 aa23.36■■□□□ 1.33
YME1L1-202ENST00000375972 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
YME1L1-202ENST00000375972 ZEB1P37275 1124 aaPredicted RBP23.32■■□□□ 1.32
YME1L1-202ENST00000375972 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
YME1L1-202ENST00000375972 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
YME1L1-202ENST00000375972 HMGXB3Q12766 1538 aa23.24■■□□□ 1.31
YME1L1-202ENST00000375972 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
YME1L1-202ENST00000375972 KIF21BO75037 1637 aa23.14■■□□□ 1.29
YME1L1-202ENST00000375972 TOP2BQ02880 1626 aa23.14■■□□□ 1.29
YME1L1-202ENST00000375972 TTBK1Q5TCY1 1321 aaPredicted RBP23.13■■□□□ 1.29
YME1L1-202ENST00000375972 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
YME1L1-202ENST00000375972 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
YME1L1-202ENST00000375972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.01■■□□□ 1.27
YME1L1-202ENST00000375972 CFTRP13569 1480 aa23.01■■□□□ 1.27
YME1L1-202ENST00000375972 CLIP1P30622 1438 aa23■■□□□ 1.27
YME1L1-202ENST00000375972 CUX1P39880 1505 aa22.96■■□□□ 1.27
YME1L1-202ENST00000375972 CCER1Q8TC90 406 aaPredicted RBP22.95■■□□□ 1.26
YME1L1-202ENST00000375972 RANGAP1P46060 587 aaPredicted RBP22.89■■□□□ 1.26
YME1L1-202ENST00000375972 VPS8Q8N3P4 1428 aa22.86■■□□□ 1.25
YME1L1-202ENST00000375972 PRXQ9BXM0 1461 aa22.85■■□□□ 1.25
YME1L1-202ENST00000375972 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
YME1L1-202ENST00000375972 ERICH3Q5RHP9 1530 aa22.82■■□□□ 1.24
YME1L1-202ENST00000375972 CADPSQ9ULU8 1353 aa22.81■■□□□ 1.24
YME1L1-202ENST00000375972 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
YME1L1-202ENST00000375972 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
YME1L1-202ENST00000375972 APLP2Q06481 763 aa22.78■■□□□ 1.24
YME1L1-202ENST00000375972 HNRNPUL2Q1KMD3 747 aaKnown RBP22.65■■□□□ 1.22
YME1L1-202ENST00000375972 CUX2O14529 1486 aa22.64■■□□□ 1.21
YME1L1-202ENST00000375972 ARAP1Q96P48 1450 aa22.64■■□□□ 1.21
YME1L1-202ENST00000375972 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
YME1L1-202ENST00000375972 IGF1RP08069 1367 aa22.6■■□□□ 1.21
YME1L1-202ENST00000375972 FANCD2Q9BXW9 1451 aa22.57■■□□□ 1.2
YME1L1-202ENST00000375972 CARMIL1Q5VZK9 1371 aa22.5■■□□□ 1.19
YME1L1-202ENST00000375972 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
YME1L1-202ENST00000375972 KANK4Q5T7N3 995 aaPredicted RBP22.49■■□□□ 1.19
YME1L1-202ENST00000375972 NESP48681 1621 aa22.46■■□□□ 1.19
YME1L1-202ENST00000375972 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
YME1L1-202ENST00000375972 TOPBP1Q92547 1522 aa22.4■■□□□ 1.18
YME1L1-202ENST00000375972 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.18
YME1L1-202ENST00000375972 POLA1P09884 1462 aaPredicted RBP22.37■■□□□ 1.17
YME1L1-202ENST00000375972 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
YME1L1-202ENST00000375972 DIEXFQ68CQ4 756 aaKnown RBP22.34■■□□□ 1.17
YME1L1-202ENST00000375972 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
YME1L1-202ENST00000375972 LAMC3Q9Y6N6 1575 aa22.3■■□□□ 1.16
YME1L1-202ENST00000375972 RRBP1Q9P2E9 1410 aaKnown RBP22.29■■□□□ 1.16
YME1L1-202ENST00000375972 ZNF316A6NFI3 1004 aaPredicted RBP22.27■■□□□ 1.16
YME1L1-202ENST00000375972 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
YME1L1-202ENST00000375972 URB2Q14146 1524 aaKnown RBP22.25■■□□□ 1.15
YME1L1-202ENST00000375972 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
YME1L1-202ENST00000375972 CCNB3Q8WWL7 1395 aa22.22■■□□□ 1.15
YME1L1-202ENST00000375972 TIAM1Q13009 1591 aa22.2■■□□□ 1.15
YME1L1-202ENST00000375972 MAP3K1Q13233 1512 aa22.2■■□□□ 1.14
YME1L1-202ENST00000375972 PDS5BQ9NTI5 1447 aa22.19■■□□□ 1.14
YME1L1-202ENST00000375972 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
YME1L1-202ENST00000375972 CUL7Q14999 1698 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms