RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.16■■■□□ 2.11e-17■■■■■ 152.5
CUL4A-202ENST00000375440 HNRNPMP52272 730 aaKnown RBP eCLIP37.4■■■■□ 3.581e-8■■■■■ 89.9
CUL4A-202ENST00000375440 SF3B1O75533 1304 aaKnown RBP eCLIP27.16■■□□□ 1.943e-6■■■■■ 79.9
CUL4A-202ENST00000375440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.44■■■□□ 2.149e-7■■■■■ 77.9
CUL4A-202ENST00000375440 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.87■■□□□ 1.256e-8■■■■■ 67.2
CUL4A-202ENST00000375440 WRNQ14191 1432 aaPredicted RBP eCLIP42.18■■■■■ 4.341e-6■■■■■ 58.5
CUL4A-202ENST00000375440 BCCIPQ9P287 314 aaKnown RBP eCLIP27.77■■■□□ 2.047e-7■■■■■ 36.2
CUL4A-202ENST00000375440 RBM15Q96T37 977 aaKnown RBP eCLIP27.57■■■□□ 24e-9■■■■■ 33.8
CUL4A-202ENST00000375440 AGGF1Q8N302 714 aaeCLIP27.27■■□□□ 1.966e-10■■■■■ 30.6
CUL4A-202ENST00000375440 RBM5P52756 815 aaKnown RBP eCLIP29.74■■■□□ 2.352e-8■■■■■ 30
CUL4A-202ENST00000375440 PRPF4O43172 522 aaKnown RBP eCLIP27.26■■□□□ 1.951e-8■■■■■ 26.9
CUL4A-202ENST00000375440 TARDBPQ13148 414 aaKnown RBP eCLIP24.65■■□□□ 1.543e-7■■■■□ 24.7
CUL4A-202ENST00000375440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.92■■■■□ 3.825e-9■■■■□ 24.1
CUL4A-202ENST00000375440 EFTUD2Q15029 972 aaKnown RBP eCLIP27.3■■□□□ 1.962e-7■■■■□ 23.7
CUL4A-202ENST00000375440 ZNF622Q969S3 477 aaKnown RBP eCLIP29.96■■■□□ 2.397e-6■■■■□ 22.7
CUL4A-202ENST00000375440 TIA1P31483 386 aaKnown RBP eCLIP25.33■■□□□ 1.651e-7■■■■□ 22.5
CUL4A-202ENST00000375440 U2AF2P26368 475 aaKnown RBP eCLIP30.51■■■□□ 2.479e-8■■■■□ 22.4
CUL4A-202ENST00000375440 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.78■■□□□ 1.883e-7■■■■□ 20.7
CUL4A-202ENST00000375440 EIF4G2P78344 907 aaKnown RBP eCLIP37.09■■■■□ 3.533e-7■■■■□ 20.7
CUL4A-202ENST00000375440 RBM22Q9NW64 420 aaKnown RBP eCLIP26.76■■□□□ 1.876e-7■■■■□ 20.6
CUL4A-202ENST00000375440 KHSRPQ92945 711 aaKnown RBP eCLIP27.56■■■□□ 28e-7■■■■□ 20.3
CUL4A-202ENST00000375440 DDX6P26196 483 aaKnown RBP eCLIP25.93■■□□□ 1.742e-6■■■■□ 20
CUL4A-202ENST00000375440 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.49■■□□□ 1.831e-5■■■■□ 19.8
CUL4A-202ENST00000375440 SRSF1Q07955 248 aaKnown RBP eCLIP20.37■□□□□ 0.858e-7■■■■□ 19.5
CUL4A-202ENST00000375440 DKC1O60832 514 aaKnown RBP eCLIP28.58■■■□□ 2.172e-6■■■□□ 19.1
CUL4A-202ENST00000375440 HNRNPLP14866 589 aaKnown RBP eCLIP26.32■■□□□ 1.81e-6■■■□□ 18.8
CUL4A-202ENST00000375440 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.7■■□□□ 1.385e-7■■■□□ 18.3
CUL4A-202ENST00000375440 CSTF2P33240 577 aaKnown RBP eCLIP24.46■■□□□ 1.515e-6■■■□□ 17.8
CUL4A-202ENST00000375440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.41■■■■□ 3.583e-8■■■□□ 17.7
CUL4A-202ENST00000375440 SF3B4Q15427 424 aaKnown RBP eCLIP23.36■■□□□ 1.337e-10■■■□□ 17.1
CUL4A-202ENST00000375440 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.05■■□□□ 1.761e-6■■■□□ 17
CUL4A-202ENST00000375440 RBFOX2O43251 390 aaKnown RBP eCLIP21.69■■□□□ 1.063e-7■■■□□ 16.8
CUL4A-202ENST00000375440 GTF2F1P35269 517 aaKnown RBP eCLIP29.71■■■□□ 2.356e-9■■■□□ 16.6
CUL4A-202ENST00000375440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.55■■■□□ 2.85e-7■■■□□ 16.5
CUL4A-202ENST00000375440 HNRNPKP61978 463 aaKnown RBP eCLIP24.34■■□□□ 1.491e-6■■■□□ 16
CUL4A-202ENST00000375440 AQRO60306 1485 aaKnown RBP eCLIP39.52■■■■□ 3.924e-6■■■□□ 15.2
CUL4A-202ENST00000375440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.36■□□□□ 0.852e-8■■■□□ 14.7
CUL4A-202ENST00000375440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.75■■■■□ 3.472e-7■■□□□ 14.1
CUL4A-202ENST00000375440 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.33■■■□□ 2.133e-6■■□□□ 14.1
CUL4A-202ENST00000375440 SF3A3Q12874 501 aaKnown RBP eCLIP27.24■■□□□ 1.952e-8■■□□□ 13.6
CUL4A-202ENST00000375440 FXR2P51116 673 aaKnown RBP eCLIP29.59■■■□□ 2.334e-6■■□□□ 13.5
CUL4A-202ENST00000375440 HNRNPCP07910 306 aaKnown RBP eCLIP24.11■■□□□ 1.453e-7■■□□□ 12.8
CUL4A-202ENST00000375440 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.15■■■□□ 2.587e-8■■□□□ 12.3
CUL4A-202ENST00000375440 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.19■■□□□ 1.624e-7■■□□□ 12
CUL4A-202ENST00000375440 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.42■■■□□ 2.34e-7■□□□□ 11.3
CUL4A-202ENST00000375440 U2AF1Q01081 240 aaKnown RBP eCLIP34.41■■■■□ 3.15e-9■□□□□ 10.7
CUL4A-202ENST00000375440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.06■■■□□ 2.087e-6■□□□□ 10.1
CUL4A-202ENST00000375440 PPIGQ13427 754 aaKnown RBP eCLIP25.91■■□□□ 1.741e-7■□□□□ 9.9
CUL4A-202ENST00000375440 AATFQ9NY61 560 aaKnown RBP eCLIP30.53■■■□□ 2.481e-6■□□□□ 9.7
CUL4A-202ENST00000375440 DDX3XO00571 662 aaKnown RBP eCLIP28.61■■■□□ 2.177e-10■□□□□ 9.6
CUL4A-202ENST00000375440 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.96■■□□□ 1.434e-6■□□□□ 9.4
CUL4A-202ENST00000375440 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.73■■■□□ 2.196e-7■□□□□ 9.3
CUL4A-202ENST00000375440 SRSF9Q13242 221 aaKnown RBP eCLIP18.69■□□□□ 0.589e-7■□□□□ 9.1
CUL4A-202ENST00000375440 NONOQ15233 471 aaKnown RBP eCLIP29.79■■■□□ 2.363e-6■□□□□ 9
CUL4A-202ENST00000375440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.47■■■□□ 2.313e-9■□□□□ 8.7
CUL4A-202ENST00000375440 PCBP2Q15366 365 aaKnown RBP eCLIP25.93■■□□□ 1.745e-6■□□□□ 8.6
CUL4A-202ENST00000375440 YBX3P16989 372 aaKnown RBP eCLIP28.36■■■□□ 2.133e-7■□□□□ 8.4
CUL4A-202ENST00000375440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.11■■□□□ 1.933e-11■□□□□ 8.3
Retrieved 58 of 58 RNA–protein pairs in 12.6 ms