RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 EFCAB5A4FU69 1503 aa39.71■■■■□ 3.95
CUL4A-202ENST00000375440 TIAM1Q13009 1591 aa39.7■■■■□ 3.95
CUL4A-202ENST00000375440 FHAD1B1AJZ9 1412 aa39.69■■■■□ 3.94
CUL4A-202ENST00000375440 RRBP1Q9P2E9 1410 aaKnown RBP39.64■■■■□ 3.94
CUL4A-202ENST00000375440 P3H3Q8IVL6 736 aa39.64■■■■□ 3.94
CUL4A-202ENST00000375440 FHOD3Q2V2M9 1422 aa39.63■■■■□ 3.93
CUL4A-202ENST00000375440 PCF11O94913 1555 aaKnown RBP39.62■■■■□ 3.93
CUL4A-202ENST00000375440 PBRM1Q86U86 1689 aa39.59■■■■□ 3.93
CUL4A-202ENST00000375440 WDR62O43379 1518 aa39.55■■■■□ 3.92
CUL4A-202ENST00000375440 CFAP43Q8NDM7 1665 aa39.52■■■■□ 3.92
CUL4A-202ENST00000375440 AQRO60306 1485 aaKnown RBP eCLIP39.52■■■■□ 3.924e-6■■■□□ 15.2
CUL4A-202ENST00000375440 LRRC9Q6ZRR7 1453 aa39.51■■■■□ 3.92
CUL4A-202ENST00000375440 FYCO1Q9BQS8 1478 aa39.48■■■■□ 3.91
CUL4A-202ENST00000375440 SAMD9Q5K651 1589 aa39.47■■■■□ 3.91
CUL4A-202ENST00000375440 CCNB3Q8WWL7 1395 aa39.46■■■■□ 3.91
CUL4A-202ENST00000375440 CASKIN1Q8WXD9 1431 aa39.45■■■■□ 3.91
CUL4A-202ENST00000375440 IFT140Q96RY7 1462 aa39.44■■■■□ 3.9
CUL4A-202ENST00000375440 ADAMTS12P58397 1594 aa39.42■■■■□ 3.9
CUL4A-202ENST00000375440 FMN1Q68DA7 1419 aa39.39■■■■□ 3.9
CUL4A-202ENST00000375440 GRIN2BQ13224 1484 aa39.39■■■■□ 3.9
CUL4A-202ENST00000375440 ZNF608Q9ULD9 1512 aaPredicted RBP39.36■■■■□ 3.89
CUL4A-202ENST00000375440 SNAPC4Q5SXM2 1469 aa39.34■■■■□ 3.89
CUL4A-202ENST00000375440 ATP1B4Q9UN42 357 aaPredicted RBP39.32■■■■□ 3.88
CUL4A-202ENST00000375440 ERCC6Q03468 1493 aa39.31■■■■□ 3.88
CUL4A-202ENST00000375440 PHLDB1Q86UU1 1377 aa39.28■■■■□ 3.88
CUL4A-202ENST00000375440 THOC2Q8NI27 1593 aaKnown RBP39.25■■■■□ 3.87
CUL4A-202ENST00000375440 IQGAP2Q13576 1575 aa39.2■■■■□ 3.87
CUL4A-202ENST00000375440 EIF4G3O43432 1585 aaKnown RBP39.16■■■■□ 3.86
CUL4A-202ENST00000375440 LRRIQ1Q96JM4 1722 aa39.15■■■■□ 3.86
CUL4A-202ENST00000375440 DHX57Q6P158 1386 aaKnown RBP39.14■■■■□ 3.86
CUL4A-202ENST00000375440 ITGAEP38570 1179 aa39.09■■■■□ 3.85
CUL4A-202ENST00000375440 CLSPNQ9HAW4 1339 aa39.06■■■■□ 3.84
CUL4A-202ENST00000375440 UGGT2Q9NYU1 1516 aa39■■■■□ 3.83
CUL4A-202ENST00000375440 MTUS2Q5JR59 1369 aa38.97■■■■□ 3.83
CUL4A-202ENST00000375440 GRIN2AQ12879 1464 aa38.97■■■■□ 3.83
CUL4A-202ENST00000375440 FAM50AQ14320 339 aaKnown RBP38.95■■■■□ 3.83
CUL4A-202ENST00000375440 KIAA0586Q9BVV6 1533 aa38.95■■■■□ 3.83
CUL4A-202ENST00000375440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.92■■■■□ 3.825e-9■■■■□ 24.1
CUL4A-202ENST00000375440 MAGI1Q96QZ7 1491 aaPredicted RBP38.92■■■■□ 3.82
CUL4A-202ENST00000375440 RAB3GAP2Q9H2M9 1393 aa38.9■■■■□ 3.82
CUL4A-202ENST00000375440 HECW1Q76N89 1606 aa38.87■■■■□ 3.81
CUL4A-202ENST00000375440 CCDC18Q5T9S5 1454 aa38.87■■■■□ 3.81
CUL4A-202ENST00000375440 FGD6Q6ZV73 1430 aa38.87■■■■□ 3.81
CUL4A-202ENST00000375440 EHBP1L1Q8N3D4 1523 aa38.86■■■■□ 3.81
CUL4A-202ENST00000375440 SETD5Q9C0A6 1442 aa38.85■■■■□ 3.81
CUL4A-202ENST00000375440 NCOA2Q15596 1464 aa38.83■■■■□ 3.81
CUL4A-202ENST00000375440 ZNF316A6NFI3 1004 aaPredicted RBP38.82■■■■□ 3.81
CUL4A-202ENST00000375440 SUPT6HQ7KZ85 1726 aaKnown RBP38.81■■■■□ 3.8
CUL4A-202ENST00000375440 MAGI3Q5TCQ9 1506 aa38.81■■■■□ 3.8
CUL4A-202ENST00000375440 DISP1Q96F81 1524 aa38.81■■■■□ 3.8
CUL4A-202ENST00000375440 SYNJ2O15056 1496 aa38.8■■■■□ 3.8
CUL4A-202ENST00000375440 KIAA0556O60303 1618 aa38.8■■■■□ 3.8
CUL4A-202ENST00000375440 DIEXFQ68CQ4 756 aaKnown RBP38.77■■■■□ 3.8
CUL4A-202ENST00000375440 EPRSP07814 1512 aaKnown RBP38.77■■■■□ 3.8
CUL4A-202ENST00000375440 ARHGEF11O15085 1522 aa38.74■■■■□ 3.79
CUL4A-202ENST00000375440 MYOM3Q5VTT5 1437 aa38.74■■■■□ 3.79
CUL4A-202ENST00000375440 CEP170Q5SW79 1584 aa38.73■■■■□ 3.79
CUL4A-202ENST00000375440 CHMP7Q8WUX9 453 aaPredicted RBP38.72■■■■□ 3.79
CUL4A-202ENST00000375440 CDK13Q14004 1512 aaKnown RBP38.68■■■■□ 3.78
CUL4A-202ENST00000375440 MAPKBP1O60336 1514 aa38.65■■■■□ 3.78
CUL4A-202ENST00000375440 NUP160Q12769 1436 aa38.6■■■■□ 3.77
CUL4A-202ENST00000375440 FBLN2P98095 1184 aa38.58■■■■□ 3.77
CUL4A-202ENST00000375440 PTPRKQ15262 1439 aa38.57■■■■□ 3.77
CUL4A-202ENST00000375440 PTPN23Q9H3S7 1636 aa38.57■■■■□ 3.76
CUL4A-202ENST00000375440 RAPGEF6Q8TEU7 1601 aa38.54■■■■□ 3.76
CUL4A-202ENST00000375440 NUP153P49790 1475 aaKnown RBP38.53■■■■□ 3.76
CUL4A-202ENST00000375440 ARID3CA6NKF2 412 aa38.51■■■■□ 3.75
CUL4A-202ENST00000375440 TCOF1Q13428 1488 aaKnown RBP38.47■■■■□ 3.75
CUL4A-202ENST00000375440 HFM1A2PYH4 1435 aa38.46■■■■□ 3.75
CUL4A-202ENST00000375440 JPH4Q96JJ6 628 aa38.42■■■■□ 3.74
CUL4A-202ENST00000375440 CARMIL2Q6F5E8 1435 aa38.38■■■■□ 3.74
CUL4A-202ENST00000375440 MIA2Q96PC5 1412 aa38.38■■■■□ 3.74
CUL4A-202ENST00000375440 NAIPQ13075 1403 aa38.35■■■■□ 3.73
CUL4A-202ENST00000375440 PLB1Q6P1J6 1458 aa38.34■■■■□ 3.73
CUL4A-202ENST00000375440 CDK11AQ9UQ88 783 aaPredicted RBP38.26■■■■□ 3.71
CUL4A-202ENST00000375440 SIN3AQ96ST3 1273 aa38.24■■■■□ 3.71
CUL4A-202ENST00000375440 UACAQ9BZF9 1416 aa38.23■■■■□ 3.71
CUL4A-202ENST00000375440 TROQ12816 1431 aaPredicted RBP38.2■■■■□ 3.71
CUL4A-202ENST00000375440 GCC2Q8IWJ2 1684 aa38.19■■■■□ 3.7
CUL4A-202ENST00000375440 PRG4Q92954 1404 aaPredicted RBP38.18■■■■□ 3.7
CUL4A-202ENST00000375440 AKNAQ7Z591 1439 aa38.17■■■■□ 3.7
CUL4A-202ENST00000375440 ABCA8O94911 1581 aa38.16■■■■□ 3.7
CUL4A-202ENST00000375440 CHD1O14646 1710 aa38.15■■■■□ 3.7
CUL4A-202ENST00000375440 NEUROD1Q13562 356 aa38.15■■■■□ 3.7
CUL4A-202ENST00000375440 CHIC2Q9UKJ5 165 aa38.14■■■■□ 3.7
CUL4A-202ENST00000375440 RRP7BPQ9NSQ0 103 aa38.12■■■■□ 3.69
CUL4A-202ENST00000375440 TIMELESSQ9UNS1 1208 aa38.11■■■■□ 3.69
CUL4A-202ENST00000375440 ADCY10Q96PN6 1610 aa38.1■■■■□ 3.69
CUL4A-202ENST00000375440 MIER1Q8N108 512 aa38.06■■■■□ 3.68
CUL4A-202ENST00000375440 DNMT1P26358 1616 aaKnown RBP38.06■■■■□ 3.68
CUL4A-202ENST00000375440 KIF14Q15058 1648 aa38.06■■■■□ 3.68
CUL4A-202ENST00000375440 DAPK1P53355 1430 aa38.05■■■■□ 3.68
CUL4A-202ENST00000375440 KDM6BO15054 1643 aa38.03■■■■□ 3.68
CUL4A-202ENST00000375440 ZNF644Q9H582 1327 aaPredicted RBP38.03■■■■□ 3.68
CUL4A-202ENST00000375440 ABCC5O15440 1437 aa38.01■■■■□ 3.68
CUL4A-202ENST00000375440 ITSN2Q9NZM3 1697 aa38.01■■■■□ 3.67
CUL4A-202ENST00000375440 ATP10BO94823 1461 aa38■■■■□ 3.67
CUL4A-202ENST00000375440 GPATCH8Q9UKJ3 1502 aaKnown RBP37.98■■■■□ 3.67
CUL4A-202ENST00000375440 ROCK1Q13464 1354 aa37.97■■■■□ 3.67
CUL4A-202ENST00000375440 PTPRGP23470 1445 aa37.94■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms