RNA–Protein interactions for RNA: ENST00000374787.7

SMC2-202, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC2, Length 4,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-202ENST00000374787 SLC24A1O60721 1099 aa12.15□□□□□ -0.46
SMC2-202ENST00000374787 CHIC1Q5VXU3 224 aa11.59□□□□□ -0.55
SMC2-202ENST00000374787 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
SMC2-202ENST00000374787 PLPPR3Q6T4P5 718 aa11.19□□□□□ -0.62
SMC2-202ENST00000374787 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
SMC2-202ENST00000374787 DAXXQ9UER7 740 aaPredicted RBP10.92□□□□□ -0.66
SMC2-202ENST00000374787 AEBP2Q6ZN18 517 aaPredicted RBP10.91□□□□□ -0.66
SMC2-202ENST00000374787 NCBP3Q53F19 620 aaKnown RBP10.77□□□□□ -0.68
SMC2-202ENST00000374787 KCNA4P22459 653 aa10.65□□□□□ -0.7
SMC2-202ENST00000374787 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
SMC2-202ENST00000374787 AMER1Q5JTC6 1135 aaPredicted RBP10.61□□□□□ -0.71
SMC2-202ENST00000374787 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
SMC2-202ENST00000374787 PHF23Q9BUL5 403 aaPredicted RBP10.58□□□□□ -0.72
SMC2-202ENST00000374787 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
SMC2-202ENST00000374787 APLP2Q06481 763 aa10.35□□□□□ -0.75
SMC2-202ENST00000374787 ARXQ96QS3 562 aa10.27□□□□□ -0.76
SMC2-202ENST00000374787 TTBK1Q5TCY1 1321 aaPredicted RBP10.23□□□□□ -0.77
SMC2-202ENST00000374787 TULP1O00294 542 aaPredicted RBP10.21□□□□□ -0.78
SMC2-202ENST00000374787 PELP1Q8IZL8 1130 aaKnown RBP10.21□□□□□ -0.78
SMC2-202ENST00000374787 TAOK2Q9UL54 1235 aa10.17□□□□□ -0.78
SMC2-202ENST00000374787 ERICH6Q7L0X2 663 aa10.16□□□□□ -0.78
SMC2-202ENST00000374787 MYT1Q01538 1121 aa10.16□□□□□ -0.78
SMC2-202ENST00000374787 TPRNQ4KMQ1 711 aa10.04□□□□□ -0.8
SMC2-202ENST00000374787 KLHL34Q8N239 644 aa10□□□□□ -0.81
SMC2-202ENST00000374787 RANGAP1P46060 587 aaPredicted RBP10□□□□□ -0.81
SMC2-202ENST00000374787 SLC4A1APQ9BWU0 796 aaKnown RBP9.99□□□□□ -0.81
SMC2-202ENST00000374787 HOMEZQ8IX15 550 aa9.98□□□□□ -0.81
SMC2-202ENST00000374787 BCANQ96GW7 911 aa9.97□□□□□ -0.81
SMC2-202ENST00000374787 PODXL2Q9NZ53 605 aa9.9□□□□□ -0.82
SMC2-202ENST00000374787 PLCB2Q00722 1185 aa9.85□□□□□ -0.83
SMC2-202ENST00000374787 GTF3C3Q9Y5Q9 886 aa9.82□□□□□ -0.84
SMC2-202ENST00000374787 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
SMC2-202ENST00000374787 EIF5BO60841 1220 aaKnown RBP9.79□□□□□ -0.84
SMC2-202ENST00000374787 ZBTB22O15209 634 aa9.73□□□□□ -0.85
SMC2-202ENST00000374787 ADRA2BP18089 450 aa9.65□□□□□ -0.86
SMC2-202ENST00000374787 NPM2Q86SE8 214 aaKnown RBP9.63□□□□□ -0.87
SMC2-202ENST00000374787 PLEKHG5O94827 1062 aa9.59□□□□□ -0.87
SMC2-202ENST00000374787 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
SMC2-202ENST00000374787 C14orf37Q86TY3 774 aa9.56□□□□□ -0.88
SMC2-202ENST00000374787 TRIM26Q12899 539 aaPredicted RBP9.5□□□□□ -0.89
SMC2-202ENST00000374787 KDM2AQ9Y2K7 1162 aa9.5□□□□□ -0.89
SMC2-202ENST00000374787 SUPT5HO00267 1087 aaKnown RBP9.48□□□□□ -0.89
SMC2-202ENST00000374787 FKBP8Q14318 412 aa9.48□□□□□ -0.89
SMC2-202ENST00000374787 FBLN2P98095 1184 aa9.45□□□□□ -0.9
SMC2-202ENST00000374787 VSIG10Q8N0Z9 540 aa9.43□□□□□ -0.9
SMC2-202ENST00000374787 LOC105371045A0A1W2PR82 267 aa9.4□□□□□ -0.9
SMC2-202ENST00000374787 UBTFP17480 764 aaKnown RBP9.4□□□□□ -0.9
SMC2-202ENST00000374787 HRCP23327 699 aa9.38□□□□□ -0.91
SMC2-202ENST00000374787 FBXO3Q9UK99 471 aa9.35□□□□□ -0.91
SMC2-202ENST00000374787 NPM3O75607 178 aaKnown RBP9.34□□□□□ -0.91
SMC2-202ENST00000374787 NISCHQ9Y2I1 1504 aa9.29□□□□□ -0.92
SMC2-202ENST00000374787 DCAF8L2P0C7V8 631 aa9.28□□□□□ -0.92
SMC2-202ENST00000374787 PPP6R1Q9UPN7 881 aa9.19□□□□□ -0.94
SMC2-202ENST00000374787 CHMP4AQ9BY43 222 aa9.11□□□□□ -0.95
SMC2-202ENST00000374787 PDIA4P13667 645 aaKnown RBP9.08□□□□□ -0.96
SMC2-202ENST00000374787 IGSF3O75054 1194 aa9.06□□□□□ -0.96
SMC2-202ENST00000374787 BCL11AQ9H165 835 aa9.03□□□□□ -0.96
SMC2-202ENST00000374787 SAMD1Q6SPF0 538 aaPredicted RBP9.02□□□□□ -0.96
SMC2-202ENST00000374787 PAXIP1Q6ZW49 1069 aaPredicted RBP9.02□□□□□ -0.97
SMC2-202ENST00000374787 CFAP44Q96MT7 982 aa9.02□□□□□ -0.97
SMC2-202ENST00000374787 DHX37Q8IY37 1157 aaKnown RBP9□□□□□ -0.97
SMC2-202ENST00000374787 PPP4R3CPQ6ZMV5 832 aa9□□□□□ -0.97
SMC2-202ENST00000374787 TSHZ2Q9NRE2 1034 aa9□□□□□ -0.97
SMC2-202ENST00000374787 NBR1Q14596 966 aa8.99□□□□□ -0.97
SMC2-202ENST00000374787 FOXD4L1Q9NU39 408 aa8.98□□□□□ -0.97
SMC2-202ENST00000374787 CDK11BP21127 795 aaKnown RBP8.97□□□□□ -0.97
SMC2-202ENST00000374787 CDK11AQ9UQ88 783 aaPredicted RBP8.97□□□□□ -0.97
SMC2-202ENST00000374787 TRHP20396 242 aaPredicted RBP8.97□□□□□ -0.97
SMC2-202ENST00000374787 ARID3AQ99856 593 aa8.94□□□□□ -0.98
SMC2-202ENST00000374787 UBE2Q2Q8WVN8 375 aa8.94□□□□□ -0.98
SMC2-202ENST00000374787 CNKSR2Q8WXI2 1034 aa8.92□□□□□ -0.98
SMC2-202ENST00000374787 NPM1P06748 294 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMC2-202ENST00000374787 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
SMC2-202ENST00000374787 CCDC9Q9Y3X0 531 aaKnown RBP8.88□□□□□ -0.99
SMC2-202ENST00000374787 NECTIN2Q92692 538 aa8.85□□□□□ -0.99
SMC2-202ENST00000374787 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.84□□□□□ -0.99
SMC2-202ENST00000374787 PDE4CQ08493 712 aa8.84□□□□□ -0.99
SMC2-202ENST00000374787 PKD2Q13563 968 aa8.83□□□□□ -1
SMC2-202ENST00000374787 FAM9AQ8IZU1 332 aaPredicted RBP8.82□□□□□ -1
SMC2-202ENST00000374787 BRD2P25440 801 aaKnown RBP8.81□□□□□ -1
SMC2-202ENST00000374787 ABCC9O60706 1549 aa8.8□□□□□ -1
SMC2-202ENST00000374787 HSP90B1P14625 803 aaKnown RBP8.8□□□□□ -1
SMC2-202ENST00000374787 BBXQ8WY36 941 aaPredicted RBP8.78□□□□□ -1
SMC2-202ENST00000374787 C1orf115Q9H7X2 142 aa8.76□□□□□ -1.01
SMC2-202ENST00000374787 BRPF1P55201 1214 aaPredicted RBP8.75□□□□□ -1.01
SMC2-202ENST00000374787 ZNF428Q96B54 188 aa8.74□□□□□ -1.01
SMC2-202ENST00000374787 ZBTB7CA1YPR0 619 aa8.73□□□□□ -1.01
SMC2-202ENST00000374787 POLR3GLQ9BT43 218 aa8.71□□□□□ -1.01
SMC2-202ENST00000374787 TAF7LQ5H9L4 462 aa8.7□□□□□ -1.02
SMC2-202ENST00000374787 HMGB1P09429 215 aaKnown RBP8.69□□□□□ -1.02
SMC2-202ENST00000374787 SPRYD3Q8NCJ5 442 aa8.67□□□□□ -1.02
SMC2-202ENST00000374787 PUS7Q96PZ0 661 aaKnown RBP8.67□□□□□ -1.02
SMC2-202ENST00000374787 SENP3Q9H4L4 574 aaPredicted RBP8.67□□□□□ -1.02
SMC2-202ENST00000374787 ARID3CA6NKF2 412 aa8.66□□□□□ -1.02
SMC2-202ENST00000374787 BCL11BQ9C0K0 894 aaPredicted RBP8.65□□□□□ -1.03
SMC2-202ENST00000374787 IFNLR1Q8IU57 520 aaPredicted RBP8.64□□□□□ -1.03
SMC2-202ENST00000374787 DNAJC5Q9H3Z4 198 aa8.64□□□□□ -1.03
SMC2-202ENST00000374787 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMC2-202ENST00000374787 ZMYND15Q9H091 742 aa8.61□□□□□ -1.03
SMC2-202ENST00000374787 RAD21O60216 631 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms