RNA–Protein interactions for RNA: ENST00000374372.1

GDF5-202, Transcript of growth differentiation factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF5, Length 2,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5-202ENST00000374372 NISCHQ9Y2I1 1504 aa37.32■■■■□ 3.56
GDF5-202ENST00000374372 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
GDF5-202ENST00000374372 ZCCHC6Q5VYS8 1495 aaKnown RBP31.49■■■□□ 2.63
GDF5-202ENST00000374372 SHROOM4Q9ULL8 1493 aa31.41■■■□□ 2.62
GDF5-202ENST00000374372 DCAF8L2P0C7V8 631 aa30.94■■■□□ 2.54
GDF5-202ENST00000374372 DCAF1Q9Y4B6 1507 aa30.68■■■□□ 2.5
GDF5-202ENST00000374372 SUPT5HO00267 1087 aaKnown RBP30.65■■■□□ 2.5
GDF5-202ENST00000374372 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
GDF5-202ENST00000374372 ABCC9O60706 1549 aa29.8■■■□□ 2.36
GDF5-202ENST00000374372 SCRIBQ14160 1630 aa29.75■■■□□ 2.35
GDF5-202ENST00000374372 CHIC1Q5VXU3 224 aa29.68■■■□□ 2.34
GDF5-202ENST00000374372 NACADO15069 1562 aa29.61■■■□□ 2.33
GDF5-202ENST00000374372 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
GDF5-202ENST00000374372 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
GDF5-202ENST00000374372 CECR2Q9BXF3 1484 aa29.09■■■□□ 2.25
GDF5-202ENST00000374372 MROH2BQ7Z745 1585 aa28.95■■■□□ 2.23
GDF5-202ENST00000374372 WIZO95785 1651 aa28.74■■■□□ 2.19
GDF5-202ENST00000374372 LOC105371045A0A1W2PR82 267 aa28.73■■■□□ 2.19
GDF5-202ENST00000374372 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
GDF5-202ENST00000374372 TRIM41Q8WV44 630 aa28.64■■■□□ 2.18
GDF5-202ENST00000374372 UNC13AQ9UPW8 1703 aa28.63■■■□□ 2.17
GDF5-202ENST00000374372 SMARCA4P51532 1647 aa28.46■■■□□ 2.15
GDF5-202ENST00000374372 PABPN1Q86U42 306 aaKnown RBP eCLIP28.42■■■□□ 2.14
GDF5-202ENST00000374372 BICRAQ9NZM4 1560 aa28.37■■■□□ 2.13
GDF5-202ENST00000374372 TOP2AP11388 1531 aaKnown RBP28.34■■■□□ 2.13
GDF5-202ENST00000374372 PCGF6Q9BYE7 350 aa28.32■■■□□ 2.12
GDF5-202ENST00000374372 FAM9AQ8IZU1 332 aaPredicted RBP28.31■■■□□ 2.12
GDF5-202ENST00000374372 EIF4G1Q04637 1599 aaKnown RBP28.23■■■□□ 2.11
GDF5-202ENST00000374372 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
GDF5-202ENST00000374372 SMARCA2P51531 1590 aa28.16■■■□□ 2.1
GDF5-202ENST00000374372 HRCP23327 699 aa28.09■■■□□ 2.09
GDF5-202ENST00000374372 EHMT2Q96KQ7 1210 aa28.01■■■□□ 2.07
GDF5-202ENST00000374372 PEG3Q9GZU2 1588 aa28■■■□□ 2.07
GDF5-202ENST00000374372 ABCC8Q09428 1581 aa27.95■■■□□ 2.07
GDF5-202ENST00000374372 TRIM26Q12899 539 aaPredicted RBP27.94■■■□□ 2.06
GDF5-202ENST00000374372 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
GDF5-202ENST00000374372 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
GDF5-202ENST00000374372 SOGA1O94964 1423 aa27.66■■■□□ 2.02
GDF5-202ENST00000374372 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
GDF5-202ENST00000374372 EEA1Q15075 1411 aa27.53■■■□□ 2
GDF5-202ENST00000374372 RUSC2Q8N2Y8 1516 aa27.52■■■□□ 2
GDF5-202ENST00000374372 CSRNP3Q8WYN3 585 aa27.51■■□□□ 1.99
GDF5-202ENST00000374372 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
GDF5-202ENST00000374372 SYNJ1O43426 1573 aa27.44■■□□□ 1.98
GDF5-202ENST00000374372 NCAPD3P42695 1498 aa27.42■■□□□ 1.98
GDF5-202ENST00000374372 TNIKQ9UKE5 1360 aa27.39■■□□□ 1.97
GDF5-202ENST00000374372 CEP162Q5TB80 1403 aa27.36■■□□□ 1.97
GDF5-202ENST00000374372 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
GDF5-202ENST00000374372 UBTFP17480 764 aaKnown RBP27.32■■□□□ 1.96
GDF5-202ENST00000374372 GOLGA3Q08378 1498 aa27.27■■□□□ 1.96
GDF5-202ENST00000374372 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
GDF5-202ENST00000374372 TOP2BQ02880 1626 aa27.17■■□□□ 1.94
GDF5-202ENST00000374372 ZEB1P37275 1124 aaPredicted RBP27.16■■□□□ 1.94
GDF5-202ENST00000374372 KIF21BO75037 1637 aa27.12■■□□□ 1.93
GDF5-202ENST00000374372 CFTRP13569 1480 aa27.08■■□□□ 1.93
GDF5-202ENST00000374372 BIVM-ERCC5R4GMW8 1640 aa27.06■■□□□ 1.92
GDF5-202ENST00000374372 TTBK1Q5TCY1 1321 aaPredicted RBP27.02■■□□□ 1.92
GDF5-202ENST00000374372 RAPGEF2Q9Y4G8 1499 aa27.01■■□□□ 1.91
GDF5-202ENST00000374372 CUX1P39880 1505 aa26.98■■□□□ 1.91
GDF5-202ENST00000374372 CLIP1P30622 1438 aa26.94■■□□□ 1.9
GDF5-202ENST00000374372 CADPSQ9ULU8 1353 aa26.85■■□□□ 1.89
GDF5-202ENST00000374372 CC2D2AQ9P2K1 1620 aa26.85■■□□□ 1.89
GDF5-202ENST00000374372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.84■■□□□ 1.89
GDF5-202ENST00000374372 PRXQ9BXM0 1461 aa26.84■■□□□ 1.89
GDF5-202ENST00000374372 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
GDF5-202ENST00000374372 RANGAP1P46060 587 aaPredicted RBP26.79■■□□□ 1.88
GDF5-202ENST00000374372 VPS8Q8N3P4 1428 aa26.79■■□□□ 1.88
GDF5-202ENST00000374372 ERICH3Q5RHP9 1530 aa26.78■■□□□ 1.88
GDF5-202ENST00000374372 CCER1Q8TC90 406 aaPredicted RBP26.76■■□□□ 1.87
GDF5-202ENST00000374372 PRDM2Q13029 1718 aa26.73■■□□□ 1.87
GDF5-202ENST00000374372 APLP2Q06481 763 aa26.63■■□□□ 1.85
GDF5-202ENST00000374372 CUX2O14529 1486 aa26.59■■□□□ 1.85
GDF5-202ENST00000374372 FGD5Q6ZNL6 1462 aa26.56■■□□□ 1.84
GDF5-202ENST00000374372 FANCD2Q9BXW9 1451 aa26.56■■□□□ 1.84
GDF5-202ENST00000374372 IGF1RP08069 1367 aa26.56■■□□□ 1.84
GDF5-202ENST00000374372 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
GDF5-202ENST00000374372 HNRNPUL2Q1KMD3 747 aaKnown RBP26.45■■□□□ 1.82
GDF5-202ENST00000374372 NESP48681 1621 aa26.44■■□□□ 1.82
GDF5-202ENST00000374372 CARMIL1Q5VZK9 1371 aa26.42■■□□□ 1.82
GDF5-202ENST00000374372 ARHGAP35Q9NRY4 1499 aa26.4■■□□□ 1.82
GDF5-202ENST00000374372 DNMBPQ6XZF7 1577 aa26.36■■□□□ 1.81
GDF5-202ENST00000374372 KANK4Q5T7N3 995 aaPredicted RBP26.35■■□□□ 1.81
GDF5-202ENST00000374372 TOPBP1Q92547 1522 aa26.34■■□□□ 1.81
GDF5-202ENST00000374372 RAD54L2Q9Y4B4 1467 aa26.33■■□□□ 1.81
GDF5-202ENST00000374372 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
GDF5-202ENST00000374372 ABCA10Q8WWZ4 1543 aa26.28■■□□□ 1.8
GDF5-202ENST00000374372 DNAJC5BQ9UF47 199 aa26.27■■□□□ 1.8
GDF5-202ENST00000374372 LAMC3Q9Y6N6 1575 aa26.26■■□□□ 1.79
GDF5-202ENST00000374372 URB2Q14146 1524 aaKnown RBP26.18■■□□□ 1.78
GDF5-202ENST00000374372 PDS5BQ9NTI5 1447 aa26.13■■□□□ 1.77
GDF5-202ENST00000374372 RRBP1Q9P2E9 1410 aaKnown RBP26.12■■□□□ 1.77
GDF5-202ENST00000374372 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
GDF5-202ENST00000374372 TDRD9Q8NDG6 1382 aaKnown RBP26.04■■□□□ 1.76
GDF5-202ENST00000374372 CUL7Q14999 1698 aa26.04■■□□□ 1.76
GDF5-202ENST00000374372 MAP3K1Q13233 1512 aa26.03■■□□□ 1.76
GDF5-202ENST00000374372 CCNB3Q8WWL7 1395 aa26.03■■□□□ 1.76
GDF5-202ENST00000374372 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
GDF5-202ENST00000374372 TIAM1Q13009 1591 aa26.02■■□□□ 1.76
GDF5-202ENST00000374372 DIEXFQ68CQ4 756 aaKnown RBP26.02■■□□□ 1.76
GDF5-202ENST00000374372 WDR97A6NE52 1622 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms