RNA–Protein interactions for RNA: ENST00000374255.6

PTBP3-204, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PTBP3, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-204ENST00000374255 NISCHQ9Y2I1 1504 aa15.81■□□□□ 0.12
PTBP3-204ENST00000374255 DCAF8L2P0C7V8 631 aa14.27□□□□□ -0.13
PTBP3-204ENST00000374255 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
PTBP3-204ENST00000374255 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
PTBP3-204ENST00000374255 ZCCHC6Q5VYS8 1495 aaKnown RBP13.25□□□□□ -0.29
PTBP3-204ENST00000374255 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.29
PTBP3-204ENST00000374255 ABCC9O60706 1549 aa13.13□□□□□ -0.31
PTBP3-204ENST00000374255 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
PTBP3-204ENST00000374255 CHIC1Q5VXU3 224 aa12.97□□□□□ -0.33
PTBP3-204ENST00000374255 FAM9AQ8IZU1 332 aaPredicted RBP12.94□□□□□ -0.34
PTBP3-204ENST00000374255 SCRIBQ14160 1630 aa12.86□□□□□ -0.35
PTBP3-204ENST00000374255 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
PTBP3-204ENST00000374255 TRIM41Q8WV44 630 aa12.78□□□□□ -0.36
PTBP3-204ENST00000374255 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTBP3-204ENST00000374255 PCGF6Q9BYE7 350 aa12.74□□□□□ -0.37
PTBP3-204ENST00000374255 DCAF1Q9Y4B6 1507 aa12.67□□□□□ -0.38
PTBP3-204ENST00000374255 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
PTBP3-204ENST00000374255 RSF1Q96T23 1441 aaPredicted RBP12.57□□□□□ -0.4
PTBP3-204ENST00000374255 TTBK1Q5TCY1 1321 aaPredicted RBP12.57□□□□□ -0.4
PTBP3-204ENST00000374255 PPARGC1BQ86YN6 1023 aaKnown RBP12.54□□□□□ -0.4
PTBP3-204ENST00000374255 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
PTBP3-204ENST00000374255 NACADO15069 1562 aa12.48□□□□□ -0.41
PTBP3-204ENST00000374255 RANGAP1P46060 587 aaPredicted RBP12.45□□□□□ -0.42
PTBP3-204ENST00000374255 RB1CC1Q8TDY2 1594 aa12.42□□□□□ -0.42
PTBP3-204ENST00000374255 SLC24A1O60721 1099 aa12.39□□□□□ -0.43
PTBP3-204ENST00000374255 MROH2BQ7Z745 1585 aa12.37□□□□□ -0.43
PTBP3-204ENST00000374255 UBTFP17480 764 aaKnown RBP12.35□□□□□ -0.43
PTBP3-204ENST00000374255 HRCP23327 699 aa12.28□□□□□ -0.44
PTBP3-204ENST00000374255 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
PTBP3-204ENST00000374255 WIZO95785 1651 aa12.26□□□□□ -0.45
PTBP3-204ENST00000374255 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
PTBP3-204ENST00000374255 APLP2Q06481 763 aa12.11□□□□□ -0.47
PTBP3-204ENST00000374255 ABCC8Q09428 1581 aa12.1□□□□□ -0.47
PTBP3-204ENST00000374255 CCDC88BA6NC98 1476 aa12.09□□□□□ -0.47
PTBP3-204ENST00000374255 CCER1Q8TC90 406 aaPredicted RBP12.09□□□□□ -0.47
PTBP3-204ENST00000374255 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.48
PTBP3-204ENST00000374255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
PTBP3-204ENST00000374255 SMARCA4P51532 1647 aa12.03□□□□□ -0.48
PTBP3-204ENST00000374255 SOGA1O94964 1423 aa12.01□□□□□ -0.49
PTBP3-204ENST00000374255 ATP1B4Q9UN42 357 aaPredicted RBP12.01□□□□□ -0.49
PTBP3-204ENST00000374255 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
PTBP3-204ENST00000374255 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
PTBP3-204ENST00000374255 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
PTBP3-204ENST00000374255 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
PTBP3-204ENST00000374255 ZEB1P37275 1124 aaPredicted RBP11.92□□□□□ -0.5
PTBP3-204ENST00000374255 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
PTBP3-204ENST00000374255 SMARCA2P51531 1590 aa11.91□□□□□ -0.5
PTBP3-204ENST00000374255 UNC13AQ9UPW8 1703 aa11.91□□□□□ -0.5
PTBP3-204ENST00000374255 AEBP2Q6ZN18 517 aaPredicted RBP11.9□□□□□ -0.5
PTBP3-204ENST00000374255 ATAD2BQ9ULI0 1458 aa11.9□□□□□ -0.5
PTBP3-204ENST00000374255 ITGAEP38570 1179 aa11.9□□□□□ -0.5
PTBP3-204ENST00000374255 BICRAQ9NZM4 1560 aa11.9□□□□□ -0.5
PTBP3-204ENST00000374255 CEP162Q5TB80 1403 aa11.87□□□□□ -0.51
PTBP3-204ENST00000374255 P3H3Q8IVL6 736 aa11.83□□□□□ -0.52
PTBP3-204ENST00000374255 GOLGA3Q08378 1498 aa11.76□□□□□ -0.53
PTBP3-204ENST00000374255 CLIP1P30622 1438 aa11.76□□□□□ -0.53
PTBP3-204ENST00000374255 TNIKQ9UKE5 1360 aa11.76□□□□□ -0.53
PTBP3-204ENST00000374255 EEA1Q15075 1411 aa11.73□□□□□ -0.53
PTBP3-204ENST00000374255 EIF4G1Q04637 1599 aaKnown RBP11.7□□□□□ -0.54
PTBP3-204ENST00000374255 CEP164Q9UPV0 1460 aa11.69□□□□□ -0.54
PTBP3-204ENST00000374255 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
PTBP3-204ENST00000374255 RAPGEF2Q9Y4G8 1499 aa11.67□□□□□ -0.54
PTBP3-204ENST00000374255 ARID3CA6NKF2 412 aa11.66□□□□□ -0.54
PTBP3-204ENST00000374255 YTHDC1Q96MU7 727 aaKnown RBP11.65□□□□□ -0.54
PTBP3-204ENST00000374255 FAM50AQ14320 339 aaKnown RBP11.64□□□□□ -0.55
PTBP3-204ENST00000374255 KIF27Q86VH2 1401 aa11.63□□□□□ -0.55
PTBP3-204ENST00000374255 NCAPD3P42695 1498 aa11.61□□□□□ -0.55
PTBP3-204ENST00000374255 DNAJC5BQ9UF47 199 aa11.61□□□□□ -0.55
PTBP3-204ENST00000374255 CUX2O14529 1486 aa11.61□□□□□ -0.55
PTBP3-204ENST00000374255 PLPPR3Q6T4P5 718 aa11.6□□□□□ -0.55
PTBP3-204ENST00000374255 DIEXFQ68CQ4 756 aaKnown RBP11.59□□□□□ -0.55
PTBP3-204ENST00000374255 CADPSQ9ULU8 1353 aa11.59□□□□□ -0.55
PTBP3-204ENST00000374255 KANK4Q5T7N3 995 aaPredicted RBP11.58□□□□□ -0.56
PTBP3-204ENST00000374255 FBLN2P98095 1184 aa11.57□□□□□ -0.56
PTBP3-204ENST00000374255 PEG3Q9GZU2 1588 aa11.56□□□□□ -0.56
PTBP3-204ENST00000374255 VPS8Q8N3P4 1428 aa11.53□□□□□ -0.56
PTBP3-204ENST00000374255 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.56
PTBP3-204ENST00000374255 TDRD9Q8NDG6 1382 aaKnown RBP11.51□□□□□ -0.57
PTBP3-204ENST00000374255 NESP48681 1621 aa11.51□□□□□ -0.57
PTBP3-204ENST00000374255 NEUROD1Q13562 356 aa11.51□□□□□ -0.57
PTBP3-204ENST00000374255 CFTRP13569 1480 aa11.5□□□□□ -0.57
PTBP3-204ENST00000374255 CUX1P39880 1505 aa11.49□□□□□ -0.57
PTBP3-204ENST00000374255 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
PTBP3-204ENST00000374255 FANCD2Q9BXW9 1451 aa11.48□□□□□ -0.57
PTBP3-204ENST00000374255 HMGXB3Q12766 1538 aa11.47□□□□□ -0.57
PTBP3-204ENST00000374255 RAD54L2Q9Y4B4 1467 aa11.46□□□□□ -0.57
PTBP3-204ENST00000374255 FGD5Q6ZNL6 1462 aa11.46□□□□□ -0.58
PTBP3-204ENST00000374255 TOP2BQ02880 1626 aa11.46□□□□□ -0.58
PTBP3-204ENST00000374255 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
PTBP3-204ENST00000374255 IGF1RP08069 1367 aa11.44□□□□□ -0.58
PTBP3-204ENST00000374255 CENPBP07199 599 aaPredicted RBP11.42□□□□□ -0.58
PTBP3-204ENST00000374255 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
PTBP3-204ENST00000374255 KIF21BO75037 1637 aa11.41□□□□□ -0.58
PTBP3-204ENST00000374255 ARAP1Q96P48 1450 aa11.39□□□□□ -0.59
PTBP3-204ENST00000374255 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
PTBP3-204ENST00000374255 PHF23Q9BUL5 403 aaPredicted RBP11.39□□□□□ -0.59
PTBP3-204ENST00000374255 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
PTBP3-204ENST00000374255 PRXQ9BXM0 1461 aa11.38□□□□□ -0.59
PTBP3-204ENST00000374255 FHOD3Q2V2M9 1422 aa11.37□□□□□ -0.59
PTBP3-204ENST00000374255 MTUS2Q5JR59 1369 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms