RNA–Protein interactions for RNA: ENST00000374127.4

ERCC6-202, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

BASIC

Gene ERCC6, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-202ENST00000374127 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
ERCC6-202ENST00000374127 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
ERCC6-202ENST00000374127 PHF23Q9BUL5 403 aaPredicted RBP15.93■□□□□ 0.14
ERCC6-202ENST00000374127 SENP3Q9H4L4 574 aaPredicted RBP15.65■□□□□ 0.1
ERCC6-202ENST00000374127 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
ERCC6-202ENST00000374127 FOXD1Q16676 465 aa14.52□□□□□ -0.08
ERCC6-202ENST00000374127 ADRA2BP18089 450 aa14.06□□□□□ -0.16
ERCC6-202ENST00000374127 PPP6R1Q9UPN7 881 aa14.05□□□□□ -0.16
ERCC6-202ENST00000374127 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
ERCC6-202ENST00000374127 MSH5O43196 834 aa13.35□□□□□ -0.27
ERCC6-202ENST00000374127 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
ERCC6-202ENST00000374127 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
ERCC6-202ENST00000374127 KCNA4P22459 653 aa12.8□□□□□ -0.36
ERCC6-202ENST00000374127 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
ERCC6-202ENST00000374127 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
ERCC6-202ENST00000374127 CNKSR2Q8WXI2 1034 aa12.61□□□□□ -0.39
ERCC6-202ENST00000374127 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
ERCC6-202ENST00000374127 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
ERCC6-202ENST00000374127 RNF216Q9NWF9 866 aaPredicted RBP12.33□□□□□ -0.44
ERCC6-202ENST00000374127 HOXD11P31277 338 aaPredicted RBP12.25□□□□□ -0.45
ERCC6-202ENST00000374127 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
ERCC6-202ENST00000374127 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
ERCC6-202ENST00000374127 POTEDQ86YR6 584 aa12.05□□□□□ -0.48
ERCC6-202ENST00000374127 DNAJC5BQ9UF47 199 aa12.02□□□□□ -0.49
ERCC6-202ENST00000374127 EHMT2Q96KQ7 1210 aa12□□□□□ -0.49
ERCC6-202ENST00000374127 SLC4A2P04920 1241 aa11.77□□□□□ -0.52
ERCC6-202ENST00000374127 ZBTB22O15209 634 aa11.77□□□□□ -0.53
ERCC6-202ENST00000374127 CSRNP3Q8WYN3 585 aa11.77□□□□□ -0.53
ERCC6-202ENST00000374127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.53
ERCC6-202ENST00000374127 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
ERCC6-202ENST00000374127 MYCNP04198 464 aaPredicted RBP11.54□□□□□ -0.56
ERCC6-202ENST00000374127 U3KPZ7 1027 aaPredicted RBP11.52□□□□□ -0.57
ERCC6-202ENST00000374127 RNF39Q9H2S5 420 aa11.44□□□□□ -0.58
ERCC6-202ENST00000374127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
ERCC6-202ENST00000374127 HNRNPUL2Q1KMD3 747 aaKnown RBP11.4□□□□□ -0.58
ERCC6-202ENST00000374127 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
ERCC6-202ENST00000374127 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
ERCC6-202ENST00000374127 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
ERCC6-202ENST00000374127 APLP2Q06481 763 aa11.26□□□□□ -0.61
ERCC6-202ENST00000374127 ATF5Q9Y2D1 282 aaPredicted RBP11.25□□□□□ -0.61
ERCC6-202ENST00000374127 SPINK5Q9NQ38 1064 aaPredicted RBP11.21□□□□□ -0.62
ERCC6-202ENST00000374127 CAPN15O75808 1086 aa11.18□□□□□ -0.62
ERCC6-202ENST00000374127 TRHP20396 242 aaPredicted RBP11.16□□□□□ -0.62
ERCC6-202ENST00000374127 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
ERCC6-202ENST00000374127 ZNF219Q9P2Y4 722 aaPredicted RBP11.11□□□□□ -0.63
ERCC6-202ENST00000374127 ABCB7O75027 752 aa10.98□□□□□ -0.65
ERCC6-202ENST00000374127 POLA2Q14181 598 aa10.98□□□□□ -0.65
ERCC6-202ENST00000374127 DSG3P32926 999 aa10.93□□□□□ -0.66
ERCC6-202ENST00000374127 FBLN2P98095 1184 aa10.77□□□□□ -0.68
ERCC6-202ENST00000374127 ZBTB12Q9Y330 459 aaPredicted RBP10.75□□□□□ -0.69
ERCC6-202ENST00000374127 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
ERCC6-202ENST00000374127 FKBP8Q14318 412 aa10.67□□□□□ -0.7
ERCC6-202ENST00000374127 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
ERCC6-202ENST00000374127 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
ERCC6-202ENST00000374127 ZNF692Q9BU19 519 aaPredicted RBP10.49□□□□□ -0.73
ERCC6-202ENST00000374127 SPDYE2BA6NHP3 402 aa10.47□□□□□ -0.73
ERCC6-202ENST00000374127 SPDYE6P0CI01 402 aa10.47□□□□□ -0.73
ERCC6-202ENST00000374127 SPDYE2Q495Y8 402 aa10.47□□□□□ -0.73
ERCC6-202ENST00000374127 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
ERCC6-202ENST00000374127 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
ERCC6-202ENST00000374127 PABPN1Q86U42 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
ERCC6-202ENST00000374127 PROM2Q8N271 834 aa10.32□□□□□ -0.76
ERCC6-202ENST00000374127 AKT1S1Q96B36 256 aa10.29□□□□□ -0.76
ERCC6-202ENST00000374127 FBXO3Q9UK99 471 aa10.24□□□□□ -0.77
ERCC6-202ENST00000374127 REM2Q8IYK8 340 aaPredicted RBP10.21□□□□□ -0.77
ERCC6-202ENST00000374127 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
ERCC6-202ENST00000374127 SPDYE1Q8NFV5 336 aaPredicted RBP10.16□□□□□ -0.78
ERCC6-202ENST00000374127 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
ERCC6-202ENST00000374127 PITPNM1O00562 1244 aa10.09□□□□□ -0.79
ERCC6-202ENST00000374127 VASPP50552 380 aaPredicted RBP10.09□□□□□ -0.79
ERCC6-202ENST00000374127 PRR29P0C7W0 189 aa10.06□□□□□ -0.8
ERCC6-202ENST00000374127 MIER1Q8N108 512 aa10.04□□□□□ -0.8
ERCC6-202ENST00000374127 PLCD3Q8N3E9 789 aa10.03□□□□□ -0.8
ERCC6-202ENST00000374127 PLEKHG5O94827 1062 aa9.98□□□□□ -0.81
ERCC6-202ENST00000374127 IFNLR1Q8IU57 520 aaPredicted RBP9.97□□□□□ -0.81
ERCC6-202ENST00000374127 CHRDL2Q6WN34 429 aa9.96□□□□□ -0.82
ERCC6-202ENST00000374127 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
ERCC6-202ENST00000374127 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
ERCC6-202ENST00000374127 CREBZFQ9NS37 354 aa9.91□□□□□ -0.82
ERCC6-202ENST00000374127 CHADLQ6NUI6 762 aa9.9□□□□□ -0.82
ERCC6-202ENST00000374127 ZBTB47Q9UFB7 747 aaPredicted RBP9.88□□□□□ -0.83
ERCC6-202ENST00000374127 FXR2P51116 673 aaKnown RBP eCLIP9.87□□□□□ -0.83
ERCC6-202ENST00000374127 PRKAR2AP13861 404 aaKnown RBP9.86□□□□□ -0.83
ERCC6-202ENST00000374127 PIP4P2Q8N4L2 257 aa9.85□□□□□ -0.83
ERCC6-202ENST00000374127 SPOCK2Q92563 424 aa9.83□□□□□ -0.84
ERCC6-202ENST00000374127 AMER1Q5JTC6 1135 aaPredicted RBP9.82□□□□□ -0.84
ERCC6-202ENST00000374127 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
ERCC6-202ENST00000374127 MNX1P50219 401 aaPredicted RBP9.8□□□□□ -0.84
ERCC6-202ENST00000374127 FARP1Q9Y4F1 1045 aaPredicted RBP9.78□□□□□ -0.84
ERCC6-202ENST00000374127 NPM1P06748 294 aaKnown RBP eCLIP9.77□□□□□ -0.85
ERCC6-202ENST00000374127 NUBP1P53384 320 aa9.72□□□□□ -0.85
ERCC6-202ENST00000374127 CIZ1Q9ULV3 898 aaPredicted RBP9.72□□□□□ -0.85
ERCC6-202ENST00000374127 DCAF8Q5TAQ9 597 aa9.69□□□□□ -0.86
ERCC6-202ENST00000374127 RASEFQ8IZ41 740 aa9.68□□□□□ -0.86
ERCC6-202ENST00000374127 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
ERCC6-202ENST00000374127 PKD2Q13563 968 aa9.65□□□□□ -0.86
ERCC6-202ENST00000374127 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.86
ERCC6-202ENST00000374127 GSE1Q14687 1217 aa9.65□□□□□ -0.87
ERCC6-202ENST00000374127 NISCHQ9Y2I1 1504 aa9.62□□□□□ -0.87
ERCC6-202ENST00000374127 ECM2O94769 699 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms