RNA–Protein interactions for RNA: ENST00000374012.7

PHF20-203, Transcript of PHD finger protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF20, Length 5,922 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-203ENST00000374012 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
PHF20-203ENST00000374012 NISCHQ9Y2I1 1504 aa21.07■□□□□ 0.96
PHF20-203ENST00000374012 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
PHF20-203ENST00000374012 SHROOM4Q9ULL8 1493 aa20.39■□□□□ 0.85
PHF20-203ENST00000374012 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.8
PHF20-203ENST00000374012 APLP2Q06481 763 aa20.07■□□□□ 0.8
PHF20-203ENST00000374012 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.79
PHF20-203ENST00000374012 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
PHF20-203ENST00000374012 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
PHF20-203ENST00000374012 TRIM41Q8WV44 630 aa19.33■□□□□ 0.69
PHF20-203ENST00000374012 RANGAP1P46060 587 aaPredicted RBP19.3■□□□□ 0.68
PHF20-203ENST00000374012 ATP1B4Q9UN42 357 aaPredicted RBP19.3■□□□□ 0.68
PHF20-203ENST00000374012 ZEB1P37275 1124 aaPredicted RBP19.2■□□□□ 0.66
PHF20-203ENST00000374012 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
PHF20-203ENST00000374012 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
PHF20-203ENST00000374012 CCER1Q8TC90 406 aaPredicted RBP19.07■□□□□ 0.64
PHF20-203ENST00000374012 CENPBP07199 599 aaPredicted RBP19.05■□□□□ 0.64
PHF20-203ENST00000374012 ERICH6Q7L0X2 663 aa19■□□□□ 0.63
PHF20-203ENST00000374012 NEFLP07196 543 aa18.79■□□□□ 0.6
PHF20-203ENST00000374012 MYT1LQ9UL68 1186 aa18.74■□□□□ 0.59
PHF20-203ENST00000374012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.69■□□□□ 0.58
PHF20-203ENST00000374012 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
PHF20-203ENST00000374012 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
PHF20-203ENST00000374012 YTHDC1Q96MU7 727 aaKnown RBP18.5■□□□□ 0.55
PHF20-203ENST00000374012 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
PHF20-203ENST00000374012 ITGAEP38570 1179 aa18.45■□□□□ 0.54
PHF20-203ENST00000374012 POLR3GLQ9BT43 218 aa18.4■□□□□ 0.54
PHF20-203ENST00000374012 DAXXQ9UER7 740 aaPredicted RBP18.32■□□□□ 0.52
PHF20-203ENST00000374012 ABCC9O60706 1549 aa18.3■□□□□ 0.52
PHF20-203ENST00000374012 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
PHF20-203ENST00000374012 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
PHF20-203ENST00000374012 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
PHF20-203ENST00000374012 MYT1Q01538 1121 aa18.15■□□□□ 0.5
PHF20-203ENST00000374012 LOC105371045A0A1W2PR82 267 aa18.14■□□□□ 0.49
PHF20-203ENST00000374012 FAM50AQ14320 339 aaKnown RBP18.12■□□□□ 0.49
PHF20-203ENST00000374012 HRCP23327 699 aa18.1■□□□□ 0.49
PHF20-203ENST00000374012 TRIM52Q96A61 297 aa18.07■□□□□ 0.48
PHF20-203ENST00000374012 CNGB1Q14028 1251 aaPredicted RBP18.03■□□□□ 0.48
PHF20-203ENST00000374012 FBLN2P98095 1184 aa17.94■□□□□ 0.46
PHF20-203ENST00000374012 CLSPNQ9HAW4 1339 aa17.89■□□□□ 0.45
PHF20-203ENST00000374012 ZNF316A6NFI3 1004 aaPredicted RBP17.88■□□□□ 0.45
PHF20-203ENST00000374012 NEUROD1Q13562 356 aa17.84■□□□□ 0.45
PHF20-203ENST00000374012 DIEXFQ68CQ4 756 aaKnown RBP17.79■□□□□ 0.44
PHF20-203ENST00000374012 ZNF326Q5BKZ1 582 aaKnown RBP17.76■□□□□ 0.43
PHF20-203ENST00000374012 ZBTB47Q9UFB7 747 aaPredicted RBP17.75■□□□□ 0.43
PHF20-203ENST00000374012 ANP32CO43423 234 aa17.73■□□□□ 0.43
PHF20-203ENST00000374012 BCANQ96GW7 911 aa17.73■□□□□ 0.43
PHF20-203ENST00000374012 RTL5Q5HYW3 569 aaPredicted RBP17.71■□□□□ 0.43
PHF20-203ENST00000374012 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
PHF20-203ENST00000374012 NEFMP07197 916 aa17.69■□□□□ 0.42
PHF20-203ENST00000374012 ESF1Q9H501 851 aaKnown RBP17.62■□□□□ 0.41
PHF20-203ENST00000374012 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
PHF20-203ENST00000374012 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
PHF20-203ENST00000374012 CSRNP3Q8WYN3 585 aa17.6■□□□□ 0.41
PHF20-203ENST00000374012 CANXP27824 592 aaKnown RBP17.6■□□□□ 0.41
PHF20-203ENST00000374012 SLC24A1O60721 1099 aa17.59■□□□□ 0.41
PHF20-203ENST00000374012 ZNF777Q9ULD5 760 aaPredicted RBP17.58■□□□□ 0.41
PHF20-203ENST00000374012 ARID3CA6NKF2 412 aa17.56■□□□□ 0.4
PHF20-203ENST00000374012 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
PHF20-203ENST00000374012 STAG3Q9UJ98 1225 aa17.47■□□□□ 0.39
PHF20-203ENST00000374012 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.39
PHF20-203ENST00000374012 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
PHF20-203ENST00000374012 CHGAP10645 457 aaKnown RBP17.36■□□□□ 0.37
PHF20-203ENST00000374012 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
PHF20-203ENST00000374012 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
PHF20-203ENST00000374012 BCL11AQ9H165 835 aa17.29■□□□□ 0.36
PHF20-203ENST00000374012 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
PHF20-203ENST00000374012 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
PHF20-203ENST00000374012 GTF3C3Q9Y5Q9 886 aa17.23■□□□□ 0.35
PHF20-203ENST00000374012 ANP32AP39687 249 aaKnown RBP17.21■□□□□ 0.35
PHF20-203ENST00000374012 TSPY4P0CV99 314 aa17.19■□□□□ 0.34
PHF20-203ENST00000374012 TSPY10P0CW01 314 aa17.19■□□□□ 0.34
PHF20-203ENST00000374012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.348e-7■■■□□ 14.8
PHF20-203ENST00000374012 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
PHF20-203ENST00000374012 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
PHF20-203ENST00000374012 ACIN1Q9UKV3 1341 aaKnown RBP17.11■□□□□ 0.33
PHF20-203ENST00000374012 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
PHF20-203ENST00000374012 UPF2Q9HAU5 1272 aaKnown RBP17.1■□□□□ 0.33
PHF20-203ENST00000374012 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.09■□□□□ 0.33
PHF20-203ENST00000374012 RSF1Q96T23 1441 aaPredicted RBP17.08■□□□□ 0.33
PHF20-203ENST00000374012 WDR43Q15061 677 aaKnown RBP eCLIP17.08■□□□□ 0.32
PHF20-203ENST00000374012 NACADO15069 1562 aa17.06■□□□□ 0.32
PHF20-203ENST00000374012 HSP90AA1P07900 732 aaKnown RBP17.05■□□□□ 0.32
PHF20-203ENST00000374012 ANP32BQ92688 251 aaKnown RBP17.05■□□□□ 0.32
PHF20-203ENST00000374012 NPM2Q86SE8 214 aaKnown RBP17.03■□□□□ 0.32
PHF20-203ENST00000374012 TMC1Q8TDI8 760 aa17.02■□□□□ 0.32
PHF20-203ENST00000374012 EEA1Q15075 1411 aa17.02■□□□□ 0.32
PHF20-203ENST00000374012 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.31
PHF20-203ENST00000374012 CLIP1P30622 1438 aa17.01■□□□□ 0.31
PHF20-203ENST00000374012 HNRNPUQ00839 825 aaKnown RBP eCLIP17.01■□□□□ 0.31
PHF20-203ENST00000374012 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
PHF20-203ENST00000374012 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
PHF20-203ENST00000374012 PLEKHD1A6NEE1 506 aa16.99■□□□□ 0.31
PHF20-203ENST00000374012 PPP1R15AO75807 674 aaPredicted RBP16.99■□□□□ 0.31
PHF20-203ENST00000374012 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
PHF20-203ENST00000374012 GOLGA3Q08378 1498 aa16.98■□□□□ 0.31
PHF20-203ENST00000374012 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
PHF20-203ENST00000374012 FKBP8Q14318 412 aa16.94■□□□□ 0.3
PHF20-203ENST00000374012 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
PHF20-203ENST00000374012 KCNH8Q96L42 1107 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms