RNA–Protein interactions for RNA: ENST00000373542.8

PHKA1-203, Transcript of phosphorylase kinase regulatory subunit alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHKA1, Length 6,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1-203ENST00000373542 NISCHQ9Y2I1 1504 aa21.66■■□□□ 1.06
PHKA1-203ENST00000373542 DCAF8L2P0C7V8 631 aa20.89■□□□□ 0.93
PHKA1-203ENST00000373542 SHROOM4Q9ULL8 1493 aa19.66■□□□□ 0.74
PHKA1-203ENST00000373542 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
PHKA1-203ENST00000373542 ABCC9O60706 1549 aa18.61■□□□□ 0.57
PHKA1-203ENST00000373542 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
PHKA1-203ENST00000373542 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.53
PHKA1-203ENST00000373542 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
PHKA1-203ENST00000373542 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
PHKA1-203ENST00000373542 APLP2Q06481 763 aa18.19■□□□□ 0.5
PHKA1-203ENST00000373542 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
PHKA1-203ENST00000373542 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
PHKA1-203ENST00000373542 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.47
PHKA1-203ENST00000373542 UBTFP17480 764 aaKnown RBP17.9■□□□□ 0.46
PHKA1-203ENST00000373542 TTBK1Q5TCY1 1321 aaPredicted RBP17.83■□□□□ 0.44
PHKA1-203ENST00000373542 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
PHKA1-203ENST00000373542 ATP1B4Q9UN42 357 aaPredicted RBP17.77■□□□□ 0.44
PHKA1-203ENST00000373542 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
PHKA1-203ENST00000373542 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
PHKA1-203ENST00000373542 PCGF6Q9BYE7 350 aa17.6■□□□□ 0.41
PHKA1-203ENST00000373542 NACADO15069 1562 aa17.55■□□□□ 0.4
PHKA1-203ENST00000373542 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
PHKA1-203ENST00000373542 PPARGC1BQ86YN6 1023 aaKnown RBP17.35■□□□□ 0.37
PHKA1-203ENST00000373542 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
PHKA1-203ENST00000373542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
PHKA1-203ENST00000373542 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.36
PHKA1-203ENST00000373542 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
PHKA1-203ENST00000373542 ZEB1P37275 1124 aaPredicted RBP17.24■□□□□ 0.35
PHKA1-203ENST00000373542 TRIM26Q12899 539 aaPredicted RBP17.18■□□□□ 0.34
PHKA1-203ENST00000373542 FBLN2P98095 1184 aa17.11■□□□□ 0.33
PHKA1-203ENST00000373542 ITGAEP38570 1179 aa17.1■□□□□ 0.33
PHKA1-203ENST00000373542 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
PHKA1-203ENST00000373542 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
PHKA1-203ENST00000373542 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
PHKA1-203ENST00000373542 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
PHKA1-203ENST00000373542 BAZ1AQ9NRL2 1556 aaPredicted RBP17■□□□□ 0.31
PHKA1-203ENST00000373542 MYO15BQ96JP2 1530 aa16.98■□□□□ 0.31
PHKA1-203ENST00000373542 CECR2Q9BXF3 1484 aa16.92■□□□□ 0.3
PHKA1-203ENST00000373542 FAM50AQ14320 339 aaKnown RBP16.87■□□□□ 0.29
PHKA1-203ENST00000373542 P3H3Q8IVL6 736 aa16.85■□□□□ 0.29
PHKA1-203ENST00000373542 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.28
PHKA1-203ENST00000373542 MROH2BQ7Z745 1585 aa16.73■□□□□ 0.27
PHKA1-203ENST00000373542 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
PHKA1-203ENST00000373542 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
PHKA1-203ENST00000373542 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
PHKA1-203ENST00000373542 TRIM52Q96A61 297 aa16.67■□□□□ 0.26
PHKA1-203ENST00000373542 CDK11AQ9UQ88 783 aaPredicted RBP16.66■□□□□ 0.26
PHKA1-203ENST00000373542 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
PHKA1-203ENST00000373542 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
PHKA1-203ENST00000373542 CENPBP07199 599 aaPredicted RBP16.64■□□□□ 0.25
PHKA1-203ENST00000373542 HRCP23327 699 aa16.64■□□□□ 0.25
PHKA1-203ENST00000373542 EEA1Q15075 1411 aa16.62■□□□□ 0.25
PHKA1-203ENST00000373542 POLR3GLQ9BT43 218 aa16.57■□□□□ 0.24
PHKA1-203ENST00000373542 CCDC88BA6NC98 1476 aa16.57■□□□□ 0.24
PHKA1-203ENST00000373542 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
PHKA1-203ENST00000373542 ZNF777Q9ULD5 760 aaPredicted RBP16.54■□□□□ 0.24
PHKA1-203ENST00000373542 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
PHKA1-203ENST00000373542 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
PHKA1-203ENST00000373542 WIZO95785 1651 aa16.52■□□□□ 0.24
PHKA1-203ENST00000373542 GOLGA3Q08378 1498 aa16.51■□□□□ 0.23
PHKA1-203ENST00000373542 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
PHKA1-203ENST00000373542 CLIP1P30622 1438 aa16.48■□□□□ 0.23
PHKA1-203ENST00000373542 NEUROD1Q13562 356 aa16.47■□□□□ 0.23
PHKA1-203ENST00000373542 ATAD2BQ9ULI0 1458 aa16.47■□□□□ 0.23
PHKA1-203ENST00000373542 YTHDC1Q96MU7 727 aaKnown RBP16.46■□□□□ 0.23
PHKA1-203ENST00000373542 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
PHKA1-203ENST00000373542 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
PHKA1-203ENST00000373542 CUX2O14529 1486 aa16.37■□□□□ 0.21
PHKA1-203ENST00000373542 MTUS2Q5JR59 1369 aa16.37■□□□□ 0.21
PHKA1-203ENST00000373542 CEP162Q5TB80 1403 aa16.36■□□□□ 0.21
PHKA1-203ENST00000373542 CADPSQ9ULU8 1353 aa16.36■□□□□ 0.21
PHKA1-203ENST00000373542 NEFLP07196 543 aa16.34■□□□□ 0.21
PHKA1-203ENST00000373542 ABCC8Q09428 1581 aa16.34■□□□□ 0.21
PHKA1-203ENST00000373542 TNIKQ9UKE5 1360 aa16.33■□□□□ 0.21
PHKA1-203ENST00000373542 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
PHKA1-203ENST00000373542 ZNF326Q5BKZ1 582 aaKnown RBP16.33■□□□□ 0.2
PHKA1-203ENST00000373542 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
PHKA1-203ENST00000373542 SOGA1O94964 1423 aa16.29■□□□□ 0.2
PHKA1-203ENST00000373542 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
PHKA1-203ENST00000373542 PLEKHD1A6NEE1 506 aa16.24■□□□□ 0.19
PHKA1-203ENST00000373542 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
PHKA1-203ENST00000373542 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
PHKA1-203ENST00000373542 EIF4G1Q04637 1599 aaKnown RBP16.22■□□□□ 0.19
PHKA1-203ENST00000373542 TSPY4P0CV99 314 aa16.22■□□□□ 0.19
PHKA1-203ENST00000373542 TSPY10P0CW01 314 aa16.22■□□□□ 0.19
PHKA1-203ENST00000373542 DIEXFQ68CQ4 756 aaKnown RBP16.2■□□□□ 0.18
PHKA1-203ENST00000373542 KCNH8Q96L42 1107 aa16.2■□□□□ 0.18
PHKA1-203ENST00000373542 TDRD9Q8NDG6 1382 aaKnown RBP16.18■□□□□ 0.18
PHKA1-203ENST00000373542 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
PHKA1-203ENST00000373542 BCANQ96GW7 911 aa16.16■□□□□ 0.18
PHKA1-203ENST00000373542 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
PHKA1-203ENST00000373542 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
PHKA1-203ENST00000373542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
PHKA1-203ENST00000373542 TONSLQ96HA7 1378 aa16.1■□□□□ 0.17
PHKA1-203ENST00000373542 CHGAP10645 457 aaKnown RBP16.08■□□□□ 0.17
PHKA1-203ENST00000373542 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
PHKA1-203ENST00000373542 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
PHKA1-203ENST00000373542 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
PHKA1-203ENST00000373542 ANP32CO43423 234 aa16.04■□□□□ 0.16
PHKA1-203ENST00000373542 RRP7BPQ9NSQ0 103 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms