RNA–Protein interactions for RNA: ENST00000372403.9

KCNMA1-204, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-204ENST00000372403 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
KCNMA1-204ENST00000372403 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
KCNMA1-204ENST00000372403 SUPT5HO00267 1087 aaKnown RBP17.06■□□□□ 0.32
KCNMA1-204ENST00000372403 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
KCNMA1-204ENST00000372403 ZCCHC6Q5VYS8 1495 aaKnown RBP16.7■□□□□ 0.26
KCNMA1-204ENST00000372403 CCDC180Q9P1Z9 1646 aa16.57■□□□□ 0.24
KCNMA1-204ENST00000372403 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.23
KCNMA1-204ENST00000372403 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
KCNMA1-204ENST00000372403 HRCP23327 699 aa16.3■□□□□ 0.2
KCNMA1-204ENST00000372403 PCGF6Q9BYE7 350 aa16.3■□□□□ 0.2
KCNMA1-204ENST00000372403 LOC105371045A0A1W2PR82 267 aa16.15■□□□□ 0.18
KCNMA1-204ENST00000372403 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-204ENST00000372403 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
KCNMA1-204ENST00000372403 TRIM26Q12899 539 aaPredicted RBP15.84■□□□□ 0.13
KCNMA1-204ENST00000372403 FAM9AQ8IZU1 332 aaPredicted RBP15.81■□□□□ 0.12
KCNMA1-204ENST00000372403 TRIM41Q8WV44 630 aa15.79■□□□□ 0.12
KCNMA1-204ENST00000372403 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
KCNMA1-204ENST00000372403 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
KCNMA1-204ENST00000372403 ABCC9O60706 1549 aa15.77■□□□□ 0.12
KCNMA1-204ENST00000372403 RSF1Q96T23 1441 aaPredicted RBP15.75■□□□□ 0.11
KCNMA1-204ENST00000372403 RB1CC1Q8TDY2 1594 aa15.61■□□□□ 0.09
KCNMA1-204ENST00000372403 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
KCNMA1-204ENST00000372403 CECR2Q9BXF3 1484 aa15.5■□□□□ 0.07
KCNMA1-204ENST00000372403 MROH2BQ7Z745 1585 aa15.42■□□□□ 0.06
KCNMA1-204ENST00000372403 NACADO15069 1562 aa15.36■□□□□ 0.05
KCNMA1-204ENST00000372403 WIZO95785 1651 aa15.34■□□□□ 0.05
KCNMA1-204ENST00000372403 TTBK1Q5TCY1 1321 aaPredicted RBP15.29■□□□□ 0.04
KCNMA1-204ENST00000372403 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
KCNMA1-204ENST00000372403 CCER1Q8TC90 406 aaPredicted RBP15.25■□□□□ 0.03
KCNMA1-204ENST00000372403 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
KCNMA1-204ENST00000372403 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
KCNMA1-204ENST00000372403 ABCC8Q09428 1581 aa15.12■□□□□ 0.01
KCNMA1-204ENST00000372403 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
KCNMA1-204ENST00000372403 UBTFP17480 764 aaKnown RBP15.08■□□□□ 0
KCNMA1-204ENST00000372403 EIF4G1Q04637 1599 aaKnown RBP15.05■□□□□ 0
KCNMA1-204ENST00000372403 SOGA1O94964 1423 aa15.04■□□□□ -0
KCNMA1-204ENST00000372403 TOP2AP11388 1531 aaKnown RBP15.03■□□□□ -0
KCNMA1-204ENST00000372403 CEP162Q5TB80 1403 aa15.02■□□□□ -0
KCNMA1-204ENST00000372403 CSRNP3Q8WYN3 585 aa15□□□□□ -0.01
KCNMA1-204ENST00000372403 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
KCNMA1-204ENST00000372403 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
KCNMA1-204ENST00000372403 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
KCNMA1-204ENST00000372403 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
KCNMA1-204ENST00000372403 RUSC2Q8N2Y8 1516 aa14.96□□□□□ -0.01
KCNMA1-204ENST00000372403 PELP1Q8IZL8 1130 aaKnown RBP14.96□□□□□ -0.01
KCNMA1-204ENST00000372403 NEUROD1Q13562 356 aa14.95□□□□□ -0.02
KCNMA1-204ENST00000372403 ACIN1Q9UKV3 1341 aaKnown RBP14.95□□□□□ -0.02
KCNMA1-204ENST00000372403 TNIKQ9UKE5 1360 aa14.95□□□□□ -0.02
KCNMA1-204ENST00000372403 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
KCNMA1-204ENST00000372403 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
KCNMA1-204ENST00000372403 CENPBP07199 599 aaPredicted RBP14.87□□□□□ -0.03
KCNMA1-204ENST00000372403 RANGAP1P46060 587 aaPredicted RBP14.87□□□□□ -0.03
KCNMA1-204ENST00000372403 EEA1Q15075 1411 aa14.86□□□□□ -0.03
KCNMA1-204ENST00000372403 GTF3C3Q9Y5Q9 886 aa14.84□□□□□ -0.03
KCNMA1-204ENST00000372403 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
KCNMA1-204ENST00000372403 GOLGA3Q08378 1498 aa14.83□□□□□ -0.03
KCNMA1-204ENST00000372403 ZNF316A6NFI3 1004 aaPredicted RBP14.81□□□□□ -0.04
KCNMA1-204ENST00000372403 YTHDC1Q96MU7 727 aaKnown RBP14.79□□□□□ -0.04
KCNMA1-204ENST00000372403 APLP2Q06481 763 aa14.78□□□□□ -0.04
KCNMA1-204ENST00000372403 CLIP1P30622 1438 aa14.73□□□□□ -0.05
KCNMA1-204ENST00000372403 CEP164Q9UPV0 1460 aa14.72□□□□□ -0.05
KCNMA1-204ENST00000372403 SYNJ1O43426 1573 aa14.69□□□□□ -0.06
KCNMA1-204ENST00000372403 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
KCNMA1-204ENST00000372403 MIER1Q8N108 512 aa14.66□□□□□ -0.06
KCNMA1-204ENST00000372403 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
KCNMA1-204ENST00000372403 VPS8Q8N3P4 1428 aa14.63□□□□□ -0.07
KCNMA1-204ENST00000372403 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
KCNMA1-204ENST00000372403 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
KCNMA1-204ENST00000372403 KIF21BO75037 1637 aa14.61□□□□□ -0.07
KCNMA1-204ENST00000372403 PEG3Q9GZU2 1588 aa14.58□□□□□ -0.07
KCNMA1-204ENST00000372403 KANK4Q5T7N3 995 aaPredicted RBP14.49□□□□□ -0.09
KCNMA1-204ENST00000372403 ITGAEP38570 1179 aa14.47□□□□□ -0.09
KCNMA1-204ENST00000372403 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
KCNMA1-204ENST00000372403 DHX57Q6P158 1386 aaKnown RBP14.42□□□□□ -0.1
KCNMA1-204ENST00000372403 ARAP1Q96P48 1450 aa14.4□□□□□ -0.1
KCNMA1-204ENST00000372403 PRXQ9BXM0 1461 aa14.38□□□□□ -0.11
KCNMA1-204ENST00000372403 CLSPNQ9HAW4 1339 aa14.36□□□□□ -0.11
KCNMA1-204ENST00000372403 KIF27Q86VH2 1401 aa14.35□□□□□ -0.11
KCNMA1-204ENST00000372403 ERICH3Q5RHP9 1530 aa14.35□□□□□ -0.11
KCNMA1-204ENST00000372403 BIVM-ERCC5R4GMW8 1640 aa14.34□□□□□ -0.11
KCNMA1-204ENST00000372403 CUX1P39880 1505 aa14.32□□□□□ -0.12
KCNMA1-204ENST00000372403 CCNB3Q8WWL7 1395 aa14.29□□□□□ -0.12
KCNMA1-204ENST00000372403 ATP1B4Q9UN42 357 aaPredicted RBP14.28□□□□□ -0.12
KCNMA1-204ENST00000372403 RRBP1Q9P2E9 1410 aaKnown RBP14.27□□□□□ -0.13
KCNMA1-204ENST00000372403 ARHGAP35Q9NRY4 1499 aa14.26□□□□□ -0.13
KCNMA1-204ENST00000372403 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
KCNMA1-204ENST00000372403 P3H3Q8IVL6 736 aa14.24□□□□□ -0.13
KCNMA1-204ENST00000372403 FAM50AQ14320 339 aaKnown RBP14.23□□□□□ -0.13
KCNMA1-204ENST00000372403 CUX2O14529 1486 aa14.22□□□□□ -0.13
KCNMA1-204ENST00000372403 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.13
KCNMA1-204ENST00000372403 HMGXB3Q12766 1538 aa14.21□□□□□ -0.14
KCNMA1-204ENST00000372403 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.14
KCNMA1-204ENST00000372403 CFTRP13569 1480 aa14.2□□□□□ -0.14
KCNMA1-204ENST00000372403 MYT1Q01538 1121 aa14.2□□□□□ -0.14
KCNMA1-204ENST00000372403 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
KCNMA1-204ENST00000372403 IGF1RP08069 1367 aa14.18□□□□□ -0.14
KCNMA1-204ENST00000372403 SIN3AQ96ST3 1273 aa14.17□□□□□ -0.14
KCNMA1-204ENST00000372403 CARMIL1Q5VZK9 1371 aa14.16□□□□□ -0.14
KCNMA1-204ENST00000372403 DDX10Q13206 875 aaKnown RBP14.14□□□□□ -0.15
KCNMA1-204ENST00000372403 SETD5Q9C0A6 1442 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms