RNA–Protein interactions for RNA: ENST00000371882.5

KLHL13-204, Transcript of kelch like family member 13, humanhuman

TSL 1 (best) BASIC

Gene KLHL13, Length 3,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL13-204ENST00000371882 NISCHQ9Y2I1 1504 aa28.55■■■□□ 2.16
KLHL13-204ENST00000371882 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
KLHL13-204ENST00000371882 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.61
KLHL13-204ENST00000371882 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
KLHL13-204ENST00000371882 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
KLHL13-204ENST00000371882 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
KLHL13-204ENST00000371882 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
KLHL13-204ENST00000371882 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
KLHL13-204ENST00000371882 MYO15BQ96JP2 1530 aa23.36■■□□□ 1.33
KLHL13-204ENST00000371882 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.32
KLHL13-204ENST00000371882 PCGF6Q9BYE7 350 aa23.24■■□□□ 1.31
KLHL13-204ENST00000371882 ABCC9O60706 1549 aa23.22■■□□□ 1.31
KLHL13-204ENST00000371882 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
KLHL13-204ENST00000371882 SCRIBQ14160 1630 aa23.08■■□□□ 1.29
KLHL13-204ENST00000371882 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
KLHL13-204ENST00000371882 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
KLHL13-204ENST00000371882 HRCP23327 699 aa22.87■■□□□ 1.25
KLHL13-204ENST00000371882 PPARGC1BQ86YN6 1023 aaKnown RBP22.76■■□□□ 1.23
KLHL13-204ENST00000371882 RSF1Q96T23 1441 aaPredicted RBP22.75■■□□□ 1.23
KLHL13-204ENST00000371882 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
KLHL13-204ENST00000371882 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.2
KLHL13-204ENST00000371882 TTBK1Q5TCY1 1321 aaPredicted RBP22.5■■□□□ 1.19
KLHL13-204ENST00000371882 RB1CC1Q8TDY2 1594 aa22.48■■□□□ 1.19
KLHL13-204ENST00000371882 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.17
KLHL13-204ENST00000371882 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
KLHL13-204ENST00000371882 NACADO15069 1562 aa22.31■■□□□ 1.16
KLHL13-204ENST00000371882 WIZO95785 1651 aa22.22■■□□□ 1.15
KLHL13-204ENST00000371882 RANGAP1P46060 587 aaPredicted RBP22.12■■□□□ 1.13
KLHL13-204ENST00000371882 UBTFP17480 764 aaKnown RBP22.03■■□□□ 1.12
KLHL13-204ENST00000371882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
KLHL13-204ENST00000371882 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
KLHL13-204ENST00000371882 BAZ1AQ9NRL2 1556 aaPredicted RBP21.89■■□□□ 1.1
KLHL13-204ENST00000371882 CCDC88BA6NC98 1476 aa21.84■■□□□ 1.09
KLHL13-204ENST00000371882 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
KLHL13-204ENST00000371882 SOGA1O94964 1423 aa21.77■■□□□ 1.08
KLHL13-204ENST00000371882 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
KLHL13-204ENST00000371882 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
KLHL13-204ENST00000371882 ZEB1P37275 1124 aaPredicted RBP21.69■■□□□ 1.06
KLHL13-204ENST00000371882 RUSC2Q8N2Y8 1516 aa21.66■■□□□ 1.06
KLHL13-204ENST00000371882 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
KLHL13-204ENST00000371882 SMARCA2P51531 1590 aa21.58■■□□□ 1.04
KLHL13-204ENST00000371882 UNC13AQ9UPW8 1703 aa21.57■■□□□ 1.04
KLHL13-204ENST00000371882 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
KLHL13-204ENST00000371882 CEP162Q5TB80 1403 aa21.52■■□□□ 1.04
KLHL13-204ENST00000371882 WRNQ14191 1432 aaPredicted RBP eCLIP21.47■■□□□ 1.03
KLHL13-204ENST00000371882 APLP2Q06481 763 aa21.47■■□□□ 1.03
KLHL13-204ENST00000371882 BICRAQ9NZM4 1560 aa21.45■■□□□ 1.02
KLHL13-204ENST00000371882 BAZ1BQ9UIG0 1483 aaKnown RBP21.4■■□□□ 1.02
KLHL13-204ENST00000371882 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
KLHL13-204ENST00000371882 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
KLHL13-204ENST00000371882 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1
KLHL13-204ENST00000371882 TNIKQ9UKE5 1360 aa21.32■■□□□ 1
KLHL13-204ENST00000371882 ITGAEP38570 1179 aa21.24■□□□□ 0.99
KLHL13-204ENST00000371882 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
KLHL13-204ENST00000371882 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.98
KLHL13-204ENST00000371882 CLIP1P30622 1438 aa21.2■□□□□ 0.98
KLHL13-204ENST00000371882 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
KLHL13-204ENST00000371882 DIEXFQ68CQ4 756 aaKnown RBP21.17■□□□□ 0.98
KLHL13-204ENST00000371882 EEA1Q15075 1411 aa21.15■□□□□ 0.98
KLHL13-204ENST00000371882 YTHDC1Q96MU7 727 aaKnown RBP21.14■□□□□ 0.98
KLHL13-204ENST00000371882 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.97
KLHL13-204ENST00000371882 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
KLHL13-204ENST00000371882 P3H3Q8IVL6 736 aa21.08■□□□□ 0.96
KLHL13-204ENST00000371882 NEUROD1Q13562 356 aa21.05■□□□□ 0.96
KLHL13-204ENST00000371882 KANK4Q5T7N3 995 aaPredicted RBP20.99■□□□□ 0.95
KLHL13-204ENST00000371882 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
KLHL13-204ENST00000371882 ACIN1Q9UKV3 1341 aaKnown RBP20.94■□□□□ 0.94
KLHL13-204ENST00000371882 VPS8Q8N3P4 1428 aa20.9■□□□□ 0.94
KLHL13-204ENST00000371882 ZNF316A6NFI3 1004 aaPredicted RBP20.9■□□□□ 0.94
KLHL13-204ENST00000371882 GTF3C3Q9Y5Q9 886 aa20.85■□□□□ 0.93
KLHL13-204ENST00000371882 KIF27Q86VH2 1401 aa20.81■□□□□ 0.92
KLHL13-204ENST00000371882 NCAPD3P42695 1498 aa20.79■□□□□ 0.92
KLHL13-204ENST00000371882 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
KLHL13-204ENST00000371882 KIF21BO75037 1637 aa20.77■□□□□ 0.92
KLHL13-204ENST00000371882 CUX1P39880 1505 aa20.77■□□□□ 0.91
KLHL13-204ENST00000371882 CENPBP07199 599 aaPredicted RBP20.77■□□□□ 0.91
KLHL13-204ENST00000371882 CUX2O14529 1486 aa20.76■□□□□ 0.91
KLHL13-204ENST00000371882 MIER1Q8N108 512 aa20.76■□□□□ 0.91
KLHL13-204ENST00000371882 TOP2BQ02880 1626 aa20.74■□□□□ 0.91
KLHL13-204ENST00000371882 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.9
KLHL13-204ENST00000371882 ARAP1Q96P48 1450 aa20.68■□□□□ 0.9
KLHL13-204ENST00000371882 ARID3CA6NKF2 412 aa20.66■□□□□ 0.9
KLHL13-204ENST00000371882 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
KLHL13-204ENST00000371882 CFTRP13569 1480 aa20.66■□□□□ 0.9
KLHL13-204ENST00000371882 PRXQ9BXM0 1461 aa20.64■□□□□ 0.9
KLHL13-204ENST00000371882 CARMIL1Q5VZK9 1371 aa20.63■□□□□ 0.89
KLHL13-204ENST00000371882 IGF1RP08069 1367 aa20.62■□□□□ 0.89
KLHL13-204ENST00000371882 PELP1Q8IZL8 1130 aaKnown RBP20.58■□□□□ 0.89
KLHL13-204ENST00000371882 HMGXB3Q12766 1538 aa20.58■□□□□ 0.89
KLHL13-204ENST00000371882 NESP48681 1621 aa20.56■□□□□ 0.88
KLHL13-204ENST00000371882 RAD54L2Q9Y4B4 1467 aa20.55■□□□□ 0.88
KLHL13-204ENST00000371882 FGD5Q6ZNL6 1462 aa20.54■□□□□ 0.88
KLHL13-204ENST00000371882 HIRIP3Q9BW71 556 aaPredicted RBP20.53■□□□□ 0.88
KLHL13-204ENST00000371882 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
KLHL13-204ENST00000371882 CCNB3Q8WWL7 1395 aa20.5■□□□□ 0.87
KLHL13-204ENST00000371882 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
KLHL13-204ENST00000371882 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
KLHL13-204ENST00000371882 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
KLHL13-204ENST00000371882 DHX57Q6P158 1386 aaKnown RBP20.48■□□□□ 0.87
KLHL13-204ENST00000371882 CC2D2AQ9P2K1 1620 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms