RNA–Protein interactions for RNA: ENST00000371876.5

KLHL13-202, Transcript of kelch like family member 13, humanhuman

TSL 1 (best) BASIC

Gene KLHL13, Length 5,331 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL13-202ENST00000371876 NISCHQ9Y2I1 1504 aa12.44□□□□□ -0.42
KLHL13-202ENST00000371876 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
KLHL13-202ENST00000371876 SHROOM4Q9ULL8 1493 aa10.69□□□□□ -0.7
KLHL13-202ENST00000371876 CCDC180Q9P1Z9 1646 aa10.68□□□□□ -0.7
KLHL13-202ENST00000371876 SUPT5HO00267 1087 aaKnown RBP10.65□□□□□ -0.7
KLHL13-202ENST00000371876 ZCCHC6Q5VYS8 1495 aaKnown RBP10.45□□□□□ -0.74
KLHL13-202ENST00000371876 DCAF1Q9Y4B6 1507 aa10.27□□□□□ -0.77
KLHL13-202ENST00000371876 TRIM41Q8WV44 630 aa10.1□□□□□ -0.79
KLHL13-202ENST00000371876 ABCC9O60706 1549 aa10.09□□□□□ -0.79
KLHL13-202ENST00000371876 NACADO15069 1562 aa10.08□□□□□ -0.8
KLHL13-202ENST00000371876 MYO15BQ96JP2 1530 aa10.06□□□□□ -0.8
KLHL13-202ENST00000371876 CHIC1Q5VXU3 224 aa10.03□□□□□ -0.8
KLHL13-202ENST00000371876 RB1CC1Q8TDY2 1594 aa10□□□□□ -0.81
KLHL13-202ENST00000371876 ZEB1P37275 1124 aaPredicted RBP9.97□□□□□ -0.81
KLHL13-202ENST00000371876 SCRIBQ14160 1630 aa9.97□□□□□ -0.81
KLHL13-202ENST00000371876 APLP2Q06481 763 aa9.95□□□□□ -0.82
KLHL13-202ENST00000371876 FAM9AQ8IZU1 332 aaPredicted RBP9.86□□□□□ -0.83
KLHL13-202ENST00000371876 PCGF6Q9BYE7 350 aa9.83□□□□□ -0.84
KLHL13-202ENST00000371876 TRIM26Q12899 539 aaPredicted RBP9.82□□□□□ -0.84
KLHL13-202ENST00000371876 RSF1Q96T23 1441 aaPredicted RBP9.77□□□□□ -0.85
KLHL13-202ENST00000371876 UBTFP17480 764 aaKnown RBP9.76□□□□□ -0.85
KLHL13-202ENST00000371876 BAZ1AQ9NRL2 1556 aaPredicted RBP9.75□□□□□ -0.85
KLHL13-202ENST00000371876 EHMT2Q96KQ7 1210 aa9.73□□□□□ -0.85
KLHL13-202ENST00000371876 HRCP23327 699 aa9.68□□□□□ -0.86
KLHL13-202ENST00000371876 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
KLHL13-202ENST00000371876 EEA1Q15075 1411 aa9.65□□□□□ -0.86
KLHL13-202ENST00000371876 LOC105371045A0A1W2PR82 267 aa9.63□□□□□ -0.87
KLHL13-202ENST00000371876 CCER1Q8TC90 406 aaPredicted RBP9.62□□□□□ -0.87
KLHL13-202ENST00000371876 CSRNP3Q8WYN3 585 aa9.55□□□□□ -0.88
KLHL13-202ENST00000371876 TOP2AP11388 1531 aaKnown RBP9.54□□□□□ -0.88
KLHL13-202ENST00000371876 PELP1Q8IZL8 1130 aaKnown RBP9.54□□□□□ -0.88
KLHL13-202ENST00000371876 BAZ1BQ9UIG0 1483 aaKnown RBP9.54□□□□□ -0.88
KLHL13-202ENST00000371876 SMARCA2P51531 1590 aa9.53□□□□□ -0.88
KLHL13-202ENST00000371876 CECR2Q9BXF3 1484 aa9.52□□□□□ -0.89
KLHL13-202ENST00000371876 MROH2BQ7Z745 1585 aa9.52□□□□□ -0.89
KLHL13-202ENST00000371876 CENPBP07199 599 aaPredicted RBP9.5□□□□□ -0.89
KLHL13-202ENST00000371876 SMARCA4P51532 1647 aa9.47□□□□□ -0.89
KLHL13-202ENST00000371876 GOLGA3Q08378 1498 aa9.45□□□□□ -0.9
KLHL13-202ENST00000371876 WRNQ14191 1432 aaPredicted RBP eCLIP9.45□□□□□ -0.9
KLHL13-202ENST00000371876 TTBK1Q5TCY1 1321 aaPredicted RBP9.45□□□□□ -0.9
KLHL13-202ENST00000371876 RANGAP1P46060 587 aaPredicted RBP9.45□□□□□ -0.9
KLHL13-202ENST00000371876 CEP164Q9UPV0 1460 aa9.42□□□□□ -0.9
KLHL13-202ENST00000371876 TNIKQ9UKE5 1360 aa9.41□□□□□ -0.9
KLHL13-202ENST00000371876 CCDC88BA6NC98 1476 aa9.41□□□□□ -0.9
KLHL13-202ENST00000371876 WIZO95785 1651 aa9.4□□□□□ -0.9
KLHL13-202ENST00000371876 ATP1B4Q9UN42 357 aaPredicted RBP9.4□□□□□ -0.9
KLHL13-202ENST00000371876 KIF27Q86VH2 1401 aa9.34□□□□□ -0.91
KLHL13-202ENST00000371876 CEP162Q5TB80 1403 aa9.33□□□□□ -0.92
KLHL13-202ENST00000371876 PPARGC1BQ86YN6 1023 aaKnown RBP9.33□□□□□ -0.92
KLHL13-202ENST00000371876 ATAD2BQ9ULI0 1458 aa9.33□□□□□ -0.92
KLHL13-202ENST00000371876 CLIP1P30622 1438 aa9.32□□□□□ -0.92
KLHL13-202ENST00000371876 HNRNPUL2Q1KMD3 747 aaKnown RBP9.29□□□□□ -0.92
KLHL13-202ENST00000371876 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
KLHL13-202ENST00000371876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.24□□□□□ -0.93
KLHL13-202ENST00000371876 NCAPD3P42695 1498 aa9.22□□□□□ -0.93
KLHL13-202ENST00000371876 ABCC8Q09428 1581 aa9.22□□□□□ -0.93
KLHL13-202ENST00000371876 HMGXB3Q12766 1538 aa9.21□□□□□ -0.93
KLHL13-202ENST00000371876 PEG3Q9GZU2 1588 aa9.2□□□□□ -0.94
KLHL13-202ENST00000371876 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
KLHL13-202ENST00000371876 SOGA1O94964 1423 aa9.19□□□□□ -0.94
KLHL13-202ENST00000371876 FAM50AQ14320 339 aaKnown RBP9.18□□□□□ -0.94
KLHL13-202ENST00000371876 DIEXFQ68CQ4 756 aaKnown RBP9.18□□□□□ -0.94
KLHL13-202ENST00000371876 FHAD1B1AJZ9 1412 aa9.18□□□□□ -0.94
KLHL13-202ENST00000371876 VPS8Q8N3P4 1428 aa9.18□□□□□ -0.94
KLHL13-202ENST00000371876 ITGAEP38570 1179 aa9.17□□□□□ -0.94
KLHL13-202ENST00000371876 CADPSQ9ULU8 1353 aa9.17□□□□□ -0.94
KLHL13-202ENST00000371876 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
KLHL13-202ENST00000371876 CLSPNQ9HAW4 1339 aa9.16□□□□□ -0.94
KLHL13-202ENST00000371876 PDS5BQ9NTI5 1447 aa9.16□□□□□ -0.94
KLHL13-202ENST00000371876 EIF4G1Q04637 1599 aaKnown RBP9.14□□□□□ -0.95
KLHL13-202ENST00000371876 NEFLP07196 543 aa9.14□□□□□ -0.95
KLHL13-202ENST00000371876 CUX2O14529 1486 aa9.13□□□□□ -0.95
KLHL13-202ENST00000371876 BICRAQ9NZM4 1560 aa9.13□□□□□ -0.95
KLHL13-202ENST00000371876 KIF21BO75037 1637 aa9.13□□□□□ -0.95
KLHL13-202ENST00000371876 CARMIL1Q5VZK9 1371 aa9.12□□□□□ -0.95
KLHL13-202ENST00000371876 ERICH3Q5RHP9 1530 aa9.1□□□□□ -0.95
KLHL13-202ENST00000371876 RAPGEF2Q9Y4G8 1499 aa9.08□□□□□ -0.96
KLHL13-202ENST00000371876 UNC13AQ9UPW8 1703 aa9.08□□□□□ -0.96
KLHL13-202ENST00000371876 MTUS2Q5JR59 1369 aa9.08□□□□□ -0.96
KLHL13-202ENST00000371876 CFTRP13569 1480 aa9.07□□□□□ -0.96
KLHL13-202ENST00000371876 TOP2BQ02880 1626 aa9.06□□□□□ -0.96
KLHL13-202ENST00000371876 FMN1Q68DA7 1419 aa9.04□□□□□ -0.96
KLHL13-202ENST00000371876 MYT1Q01538 1121 aa9.04□□□□□ -0.96
KLHL13-202ENST00000371876 TRIM52Q96A61 297 aa9.04□□□□□ -0.96
KLHL13-202ENST00000371876 FANCD2Q9BXW9 1451 aa9.04□□□□□ -0.96
KLHL13-202ENST00000371876 P3H3Q8IVL6 736 aa9.03□□□□□ -0.96
KLHL13-202ENST00000371876 YTHDC1Q96MU7 727 aaKnown RBP9.02□□□□□ -0.97
KLHL13-202ENST00000371876 CCNB3Q8WWL7 1395 aa9.01□□□□□ -0.97
KLHL13-202ENST00000371876 TIMELESSQ9UNS1 1208 aa9.01□□□□□ -0.97
KLHL13-202ENST00000371876 SYNJ1O43426 1573 aa9□□□□□ -0.97
KLHL13-202ENST00000371876 TONSLQ96HA7 1378 aa9□□□□□ -0.97
KLHL13-202ENST00000371876 ERCC6Q03468 1493 aa8.99□□□□□ -0.97
KLHL13-202ENST00000371876 ANP32CO43423 234 aa8.99□□□□□ -0.97
KLHL13-202ENST00000371876 ARHGAP35Q9NRY4 1499 aa8.98□□□□□ -0.97
KLHL13-202ENST00000371876 FBLN2P98095 1184 aa8.98□□□□□ -0.97
KLHL13-202ENST00000371876 CHMP7Q8WUX9 453 aaPredicted RBP8.98□□□□□ -0.97
KLHL13-202ENST00000371876 NEUROD1Q13562 356 aa8.97□□□□□ -0.97
KLHL13-202ENST00000371876 FGD5Q6ZNL6 1462 aa8.96□□□□□ -0.97
KLHL13-202ENST00000371876 BIVM-ERCC5R4GMW8 1640 aa8.96□□□□□ -0.98
KLHL13-202ENST00000371876 RUSC2Q8N2Y8 1516 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms