RNA–Protein interactions for RNA: ENST00000370794.7

USP33-204, Transcript of ubiquitin specific peptidase 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP33, Length 4,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-204ENST00000370794 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
USP33-204ENST00000370794 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
USP33-204ENST00000370794 SHROOM4Q9ULL8 1493 aa21.8■■□□□ 1.08
USP33-204ENST00000370794 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
USP33-204ENST00000370794 ABCC9O60706 1549 aa20.87■□□□□ 0.93
USP33-204ENST00000370794 EHMT2Q96KQ7 1210 aa20.68■□□□□ 0.9
USP33-204ENST00000370794 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
USP33-204ENST00000370794 FAM9AQ8IZU1 332 aaPredicted RBP20.38■□□□□ 0.85
USP33-204ENST00000370794 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
USP33-204ENST00000370794 APLP2Q06481 763 aa20.13■□□□□ 0.81
USP33-204ENST00000370794 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
USP33-204ENST00000370794 CCDC180Q9P1Z9 1646 aa19.88■□□□□ 0.77
USP33-204ENST00000370794 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
USP33-204ENST00000370794 ATP1B4Q9UN42 357 aaPredicted RBP19.85■□□□□ 0.77
USP33-204ENST00000370794 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
USP33-204ENST00000370794 ZCCHC6Q5VYS8 1495 aaKnown RBP19.65■□□□□ 0.74
USP33-204ENST00000370794 SCRIBQ14160 1630 aa19.63■□□□□ 0.73
USP33-204ENST00000370794 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
USP33-204ENST00000370794 PCGF6Q9BYE7 350 aa19.5■□□□□ 0.71
USP33-204ENST00000370794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.42■□□□□ 0.7
USP33-204ENST00000370794 HNRNPUL2Q1KMD3 747 aaKnown RBP19.42■□□□□ 0.7
USP33-204ENST00000370794 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
USP33-204ENST00000370794 NACADO15069 1562 aa19.32■□□□□ 0.68
USP33-204ENST00000370794 FBLN2P98095 1184 aa19.29■□□□□ 0.68
USP33-204ENST00000370794 MYT1LQ9UL68 1186 aa19.21■□□□□ 0.67
USP33-204ENST00000370794 PPARGC1BQ86YN6 1023 aaKnown RBP19.2■□□□□ 0.66
USP33-204ENST00000370794 LOC105371045A0A1W2PR82 267 aa19.18■□□□□ 0.66
USP33-204ENST00000370794 HRCP23327 699 aa19.15■□□□□ 0.66
USP33-204ENST00000370794 ITGAEP38570 1179 aa19.01■□□□□ 0.63
USP33-204ENST00000370794 CCER1Q8TC90 406 aaPredicted RBP18.98■□□□□ 0.63
USP33-204ENST00000370794 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
USP33-204ENST00000370794 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
USP33-204ENST00000370794 DCAF1Q9Y4B6 1507 aa18.92■□□□□ 0.62
USP33-204ENST00000370794 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
USP33-204ENST00000370794 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
USP33-204ENST00000370794 P3H3Q8IVL6 736 aa18.81■□□□□ 0.6
USP33-204ENST00000370794 RSF1Q96T23 1441 aaPredicted RBP18.8■□□□□ 0.6
USP33-204ENST00000370794 ARID3CA6NKF2 412 aa18.75■□□□□ 0.59
USP33-204ENST00000370794 CECR2Q9BXF3 1484 aa18.72■□□□□ 0.59
USP33-204ENST00000370794 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
USP33-204ENST00000370794 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
USP33-204ENST00000370794 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
USP33-204ENST00000370794 ERCC6Q03468 1493 aa18.64■□□□□ 0.57
USP33-204ENST00000370794 NPM1P06748 294 aaKnown RBP eCLIP18.6■□□□□ 0.57
USP33-204ENST00000370794 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.56
USP33-204ENST00000370794 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.56
USP33-204ENST00000370794 TRIM52Q96A61 297 aa18.47■□□□□ 0.55
USP33-204ENST00000370794 ZNF777Q9ULD5 760 aaPredicted RBP18.45■□□□□ 0.54
USP33-204ENST00000370794 WRNQ14191 1432 aaPredicted RBP eCLIP18.42■□□□□ 0.54
USP33-204ENST00000370794 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
USP33-204ENST00000370794 POLR3GLQ9BT43 218 aa18.4■□□□□ 0.54
USP33-204ENST00000370794 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
USP33-204ENST00000370794 CENPBP07199 599 aaPredicted RBP18.38■□□□□ 0.53
USP33-204ENST00000370794 PDS5BQ9NTI5 1447 aa18.31■□□□□ 0.52
USP33-204ENST00000370794 KIF27Q86VH2 1401 aa18.27■□□□□ 0.51
USP33-204ENST00000370794 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
USP33-204ENST00000370794 ESF1Q9H501 851 aaKnown RBP18.25■□□□□ 0.51
USP33-204ENST00000370794 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
USP33-204ENST00000370794 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
USP33-204ENST00000370794 SLC4A1APQ9BWU0 796 aaKnown RBP18.2■□□□□ 0.5
USP33-204ENST00000370794 CADPSQ9ULU8 1353 aa18.18■□□□□ 0.5
USP33-204ENST00000370794 CNGB1Q14028 1251 aaPredicted RBP18.18■□□□□ 0.5
USP33-204ENST00000370794 KCNH8Q96L42 1107 aa18.18■□□□□ 0.5
USP33-204ENST00000370794 NEUROD1Q13562 356 aa18.18■□□□□ 0.5
USP33-204ENST00000370794 EEA1Q15075 1411 aa18.17■□□□□ 0.5
USP33-204ENST00000370794 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
USP33-204ENST00000370794 ZNF326Q5BKZ1 582 aaKnown RBP18.14■□□□□ 0.5
USP33-204ENST00000370794 BCANQ96GW7 911 aa18.13■□□□□ 0.49
USP33-204ENST00000370794 MTUS2Q5JR59 1369 aa18.12■□□□□ 0.49
USP33-204ENST00000370794 CUX2O14529 1486 aa18.12■□□□□ 0.49
USP33-204ENST00000370794 PLEKHD1A6NEE1 506 aa18.11■□□□□ 0.49
USP33-204ENST00000370794 CLIP1P30622 1438 aa18.1■□□□□ 0.49
USP33-204ENST00000370794 WIZO95785 1651 aa18.1■□□□□ 0.49
USP33-204ENST00000370794 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
USP33-204ENST00000370794 SMARCA4P51532 1647 aa18.07■□□□□ 0.48
USP33-204ENST00000370794 TSPY4P0CV99 314 aa18.07■□□□□ 0.48
USP33-204ENST00000370794 TSPY10P0CW01 314 aa18.07■□□□□ 0.48
USP33-204ENST00000370794 SOGA1O94964 1423 aa18.05■□□□□ 0.48
USP33-204ENST00000370794 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
USP33-204ENST00000370794 CARMIL1Q5VZK9 1371 aa18.04■□□□□ 0.48
USP33-204ENST00000370794 CHIC2Q9UKJ5 165 aa18.04■□□□□ 0.48
USP33-204ENST00000370794 GOLGA3Q08378 1498 aa18.03■□□□□ 0.48
USP33-204ENST00000370794 DIEXFQ68CQ4 756 aaKnown RBP18.01■□□□□ 0.47
USP33-204ENST00000370794 CHGAP10645 457 aaKnown RBP18■□□□□ 0.47
USP33-204ENST00000370794 YTHDC1Q96MU7 727 aaKnown RBP18■□□□□ 0.47
USP33-204ENST00000370794 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
USP33-204ENST00000370794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.474e-13■□□□□ 11.1
USP33-204ENST00000370794 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
USP33-204ENST00000370794 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
USP33-204ENST00000370794 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
USP33-204ENST00000370794 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
USP33-204ENST00000370794 FANCD2Q9BXW9 1451 aa17.91■□□□□ 0.46
USP33-204ENST00000370794 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
USP33-204ENST00000370794 CEP162Q5TB80 1403 aa17.89■□□□□ 0.45
USP33-204ENST00000370794 CFDP1Q9UEE9 299 aaPredicted RBP17.86■□□□□ 0.45
USP33-204ENST00000370794 TNIKQ9UKE5 1360 aa17.84■□□□□ 0.45
USP33-204ENST00000370794 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
USP33-204ENST00000370794 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
USP33-204ENST00000370794 NEFLP07196 543 aa17.8■□□□□ 0.44
USP33-204ENST00000370794 CARMIL2Q6F5E8 1435 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms