RNA–Protein interactions for RNA: ENST00000370137.5

LRRC39-202, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC39, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-202ENST00000370137 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
LRRC39-202ENST00000370137 CHIC1Q5VXU3 224 aa22.43■■□□□ 1.18
LRRC39-202ENST00000370137 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
LRRC39-202ENST00000370137 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
LRRC39-202ENST00000370137 FOXD1Q16676 465 aa18.42■□□□□ 0.54
LRRC39-202ENST00000370137 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
LRRC39-202ENST00000370137 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
LRRC39-202ENST00000370137 ADRA2BP18089 450 aa17.43■□□□□ 0.38
LRRC39-202ENST00000370137 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
LRRC39-202ENST00000370137 MSH5O43196 834 aa17.08■□□□□ 0.32
LRRC39-202ENST00000370137 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
LRRC39-202ENST00000370137 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
LRRC39-202ENST00000370137 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
LRRC39-202ENST00000370137 PPP4R3CPQ6ZMV5 832 aa15.88■□□□□ 0.13
LRRC39-202ENST00000370137 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
LRRC39-202ENST00000370137 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
LRRC39-202ENST00000370137 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
LRRC39-202ENST00000370137 HOXD11P31277 338 aaPredicted RBP15.33■□□□□ 0.04
LRRC39-202ENST00000370137 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
LRRC39-202ENST00000370137 KCNA4P22459 653 aa15.16■□□□□ 0.02
LRRC39-202ENST00000370137 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
LRRC39-202ENST00000370137 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
LRRC39-202ENST00000370137 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
LRRC39-202ENST00000370137 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
LRRC39-202ENST00000370137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
LRRC39-202ENST00000370137 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
LRRC39-202ENST00000370137 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
LRRC39-202ENST00000370137 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
LRRC39-202ENST00000370137 SLC4A1APQ9BWU0 796 aaKnown RBP14.35□□□□□ -0.11
LRRC39-202ENST00000370137 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
LRRC39-202ENST00000370137 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
LRRC39-202ENST00000370137 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
LRRC39-202ENST00000370137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
LRRC39-202ENST00000370137 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
LRRC39-202ENST00000370137 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
LRRC39-202ENST00000370137 ZBTB22O15209 634 aa13.96□□□□□ -0.18
LRRC39-202ENST00000370137 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
LRRC39-202ENST00000370137 CAPN15O75808 1086 aa13.93□□□□□ -0.18
LRRC39-202ENST00000370137 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
LRRC39-202ENST00000370137 APLP2Q06481 763 aa13.91□□□□□ -0.18
LRRC39-202ENST00000370137 DSG3P32926 999 aa13.81□□□□□ -0.2
LRRC39-202ENST00000370137 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
LRRC39-202ENST00000370137 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
LRRC39-202ENST00000370137 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
LRRC39-202ENST00000370137 ABCB7O75027 752 aa13.65□□□□□ -0.22
LRRC39-202ENST00000370137 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
LRRC39-202ENST00000370137 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.23
LRRC39-202ENST00000370137 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
LRRC39-202ENST00000370137 POLA2Q14181 598 aa13.51□□□□□ -0.25
LRRC39-202ENST00000370137 ZBTB12Q9Y330 459 aaPredicted RBP13.26□□□□□ -0.29
LRRC39-202ENST00000370137 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
LRRC39-202ENST00000370137 FBLN2P98095 1184 aa13.07□□□□□ -0.32
LRRC39-202ENST00000370137 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
LRRC39-202ENST00000370137 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
LRRC39-202ENST00000370137 AKT1S1Q96B36 256 aa12.93□□□□□ -0.34
LRRC39-202ENST00000370137 SPDYE2BA6NHP3 402 aa12.89□□□□□ -0.35
LRRC39-202ENST00000370137 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
LRRC39-202ENST00000370137 SPDYE2Q495Y8 402 aa12.89□□□□□ -0.35
LRRC39-202ENST00000370137 REM2Q8IYK8 340 aaPredicted RBP12.81□□□□□ -0.36
LRRC39-202ENST00000370137 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
LRRC39-202ENST00000370137 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
LRRC39-202ENST00000370137 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
LRRC39-202ENST00000370137 POTEHQ6S545 545 aa12.69□□□□□ -0.38
LRRC39-202ENST00000370137 RTN4Q9NQC3 1192 aaKnown RBP12.68□□□□□ -0.38
LRRC39-202ENST00000370137 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
LRRC39-202ENST00000370137 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
LRRC39-202ENST00000370137 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
LRRC39-202ENST00000370137 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
LRRC39-202ENST00000370137 AMER1Q5JTC6 1135 aaPredicted RBP12.56□□□□□ -0.4
LRRC39-202ENST00000370137 PIP4P2Q8N4L2 257 aa12.51□□□□□ -0.41
LRRC39-202ENST00000370137 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
LRRC39-202ENST00000370137 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRRC39-202ENST00000370137 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
LRRC39-202ENST00000370137 PROM2Q8N271 834 aa12.39□□□□□ -0.43
LRRC39-202ENST00000370137 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
LRRC39-202ENST00000370137 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
LRRC39-202ENST00000370137 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
LRRC39-202ENST00000370137 FKBP8Q14318 412 aa12.29□□□□□ -0.44
LRRC39-202ENST00000370137 CHADLQ6NUI6 762 aa12.26□□□□□ -0.45
LRRC39-202ENST00000370137 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
LRRC39-202ENST00000370137 HAX1O00165 279 aa12.16□□□□□ -0.46
LRRC39-202ENST00000370137 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
LRRC39-202ENST00000370137 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
LRRC39-202ENST00000370137 EVX2Q03828 476 aa12.08□□□□□ -0.48
LRRC39-202ENST00000370137 SP7Q8TDD2 431 aaPredicted RBP12.05□□□□□ -0.48
LRRC39-202ENST00000370137 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
LRRC39-202ENST00000370137 PRKCSHP14314 528 aaPredicted RBP11.99□□□□□ -0.49
LRRC39-202ENST00000370137 MIER1Q8N108 512 aa11.95□□□□□ -0.5
LRRC39-202ENST00000370137 CD44P16070 742 aaKnown RBP11.94□□□□□ -0.5
LRRC39-202ENST00000370137 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
LRRC39-202ENST00000370137 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
LRRC39-202ENST00000370137 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
LRRC39-202ENST00000370137 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
LRRC39-202ENST00000370137 ARXQ96QS3 562 aa11.87□□□□□ -0.51
LRRC39-202ENST00000370137 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
LRRC39-202ENST00000370137 GABBR2O75899 941 aa11.82□□□□□ -0.52
LRRC39-202ENST00000370137 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
LRRC39-202ENST00000370137 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
LRRC39-202ENST00000370137 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
LRRC39-202ENST00000370137 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms