RNA–Protein interactions for RNA: ENST00000368623.7

SLC39A1-204, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-204ENST00000368623 NISCHQ9Y2I1 1504 aa31.43■■■□□ 2.62
SLC39A1-204ENST00000368623 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
SLC39A1-204ENST00000368623 CCDC180Q9P1Z9 1646 aa26.6■■□□□ 1.85
SLC39A1-204ENST00000368623 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
SLC39A1-204ENST00000368623 SUPT5HO00267 1087 aaKnown RBP26.52■■□□□ 1.84
SLC39A1-204ENST00000368623 DCAF8L2P0C7V8 631 aa26.43■■□□□ 1.82
SLC39A1-204ENST00000368623 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
SLC39A1-204ENST00000368623 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
SLC39A1-204ENST00000368623 MYO15BQ96JP2 1530 aa25.56■■□□□ 1.68
SLC39A1-204ENST00000368623 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
SLC39A1-204ENST00000368623 ABCC9O60706 1549 aa25.05■■□□□ 1.6
SLC39A1-204ENST00000368623 LOC105371045A0A1W2PR82 267 aa25■■□□□ 1.59
SLC39A1-204ENST00000368623 HRCP23327 699 aa24.93■■□□□ 1.58
SLC39A1-204ENST00000368623 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
SLC39A1-204ENST00000368623 PCGF6Q9BYE7 350 aa24.89■■□□□ 1.58
SLC39A1-204ENST00000368623 PPARGC1BQ86YN6 1023 aaKnown RBP24.85■■□□□ 1.57
SLC39A1-204ENST00000368623 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
SLC39A1-204ENST00000368623 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
SLC39A1-204ENST00000368623 NACADO15069 1562 aa24.65■■□□□ 1.54
SLC39A1-204ENST00000368623 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
SLC39A1-204ENST00000368623 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
SLC39A1-204ENST00000368623 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
SLC39A1-204ENST00000368623 EHMT2Q96KQ7 1210 aa24.49■■□□□ 1.51
SLC39A1-204ENST00000368623 WIZO95785 1651 aa24.4■■□□□ 1.5
SLC39A1-204ENST00000368623 TRIM26Q12899 539 aaPredicted RBP24.25■■□□□ 1.47
SLC39A1-204ENST00000368623 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
SLC39A1-204ENST00000368623 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
SLC39A1-204ENST00000368623 PABPN1Q86U42 306 aaKnown RBP eCLIP24■■□□□ 1.43
SLC39A1-204ENST00000368623 SMARCA4P51532 1647 aa23.95■■□□□ 1.43
SLC39A1-204ENST00000368623 EIF4G1Q04637 1599 aaKnown RBP23.93■■□□□ 1.42
SLC39A1-204ENST00000368623 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
SLC39A1-204ENST00000368623 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
SLC39A1-204ENST00000368623 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.42
SLC39A1-204ENST00000368623 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
SLC39A1-204ENST00000368623 BICRAQ9NZM4 1560 aa23.72■■□□□ 1.39
SLC39A1-204ENST00000368623 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
SLC39A1-204ENST00000368623 SOGA1O94964 1423 aa23.66■■□□□ 1.38
SLC39A1-204ENST00000368623 RUSC2Q8N2Y8 1516 aa23.58■■□□□ 1.37
SLC39A1-204ENST00000368623 ZEB1P37275 1124 aaPredicted RBP23.57■■□□□ 1.36
SLC39A1-204ENST00000368623 SCAF1Q9H7N4 1312 aaKnown RBP23.56■■□□□ 1.36
SLC39A1-204ENST00000368623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.48■■□□□ 1.35
SLC39A1-204ENST00000368623 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
SLC39A1-204ENST00000368623 CEP162Q5TB80 1403 aa23.47■■□□□ 1.35
SLC39A1-204ENST00000368623 CSRNP3Q8WYN3 585 aa23.46■■□□□ 1.35
SLC39A1-204ENST00000368623 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
SLC39A1-204ENST00000368623 PEG3Q9GZU2 1588 aa23.39■■□□□ 1.33
SLC39A1-204ENST00000368623 ATAD2BQ9ULI0 1458 aa23.38■■□□□ 1.33
SLC39A1-204ENST00000368623 TNIKQ9UKE5 1360 aa23.35■■□□□ 1.33
SLC39A1-204ENST00000368623 CCER1Q8TC90 406 aaPredicted RBP23.33■■□□□ 1.33
SLC39A1-204ENST00000368623 BAZ1BQ9UIG0 1483 aaKnown RBP23.33■■□□□ 1.33
SLC39A1-204ENST00000368623 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
SLC39A1-204ENST00000368623 EEA1Q15075 1411 aa23.29■■□□□ 1.32
SLC39A1-204ENST00000368623 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
SLC39A1-204ENST00000368623 RANGAP1P46060 587 aaPredicted RBP23.22■■□□□ 1.31
SLC39A1-204ENST00000368623 PELP1Q8IZL8 1130 aaKnown RBP23.17■■□□□ 1.3
SLC39A1-204ENST00000368623 CEP164Q9UPV0 1460 aa23.1■■□□□ 1.29
SLC39A1-204ENST00000368623 NEUROD1Q13562 356 aa23.07■■□□□ 1.28
SLC39A1-204ENST00000368623 RAPGEF2Q9Y4G8 1499 aa23.06■■□□□ 1.28
SLC39A1-204ENST00000368623 CLIP1P30622 1438 aa23.04■■□□□ 1.28
SLC39A1-204ENST00000368623 KIF21BO75037 1637 aa23.02■■□□□ 1.28
SLC39A1-204ENST00000368623 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
SLC39A1-204ENST00000368623 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
SLC39A1-204ENST00000368623 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
SLC39A1-204ENST00000368623 GTF3C3Q9Y5Q9 886 aa22.9■■□□□ 1.26
SLC39A1-204ENST00000368623 VPS8Q8N3P4 1428 aa22.88■■□□□ 1.25
SLC39A1-204ENST00000368623 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
SLC39A1-204ENST00000368623 APLP2Q06481 763 aa22.86■■□□□ 1.25
SLC39A1-204ENST00000368623 DIEXFQ68CQ4 756 aaKnown RBP22.83■■□□□ 1.25
SLC39A1-204ENST00000368623 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
SLC39A1-204ENST00000368623 HMGXB3Q12766 1538 aa22.81■■□□□ 1.24
SLC39A1-204ENST00000368623 CUX1P39880 1505 aa22.81■■□□□ 1.24
SLC39A1-204ENST00000368623 YTHDC1Q96MU7 727 aaKnown RBP22.73■■□□□ 1.23
SLC39A1-204ENST00000368623 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
SLC39A1-204ENST00000368623 CFTRP13569 1480 aa22.7■■□□□ 1.22
SLC39A1-204ENST00000368623 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
SLC39A1-204ENST00000368623 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
SLC39A1-204ENST00000368623 KANK4Q5T7N3 995 aaPredicted RBP22.66■■□□□ 1.22
SLC39A1-204ENST00000368623 ERICH3Q5RHP9 1530 aa22.65■■□□□ 1.22
SLC39A1-204ENST00000368623 CENPBP07199 599 aaPredicted RBP22.63■■□□□ 1.21
SLC39A1-204ENST00000368623 ZNF316A6NFI3 1004 aaPredicted RBP22.6■■□□□ 1.21
SLC39A1-204ENST00000368623 CUX2O14529 1486 aa22.53■■□□□ 1.2
SLC39A1-204ENST00000368623 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
SLC39A1-204ENST00000368623 ARHGAP35Q9NRY4 1499 aa22.48■■□□□ 1.19
SLC39A1-204ENST00000368623 IGF1RP08069 1367 aa22.46■■□□□ 1.19
SLC39A1-204ENST00000368623 ITGAEP38570 1179 aa22.45■■□□□ 1.18
SLC39A1-204ENST00000368623 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
SLC39A1-204ENST00000368623 CC2D2AQ9P2K1 1620 aa22.41■■□□□ 1.18
SLC39A1-204ENST00000368623 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
SLC39A1-204ENST00000368623 MIER1Q8N108 512 aa22.38■■□□□ 1.17
SLC39A1-204ENST00000368623 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
SLC39A1-204ENST00000368623 DHX57Q6P158 1386 aaKnown RBP22.37■■□□□ 1.17
SLC39A1-204ENST00000368623 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
SLC39A1-204ENST00000368623 FANCD2Q9BXW9 1451 aa22.31■■□□□ 1.16
SLC39A1-204ENST00000368623 RRBP1Q9P2E9 1410 aaKnown RBP22.31■■□□□ 1.16
SLC39A1-204ENST00000368623 CCNB3Q8WWL7 1395 aa22.29■■□□□ 1.16
SLC39A1-204ENST00000368623 NESP48681 1621 aa22.29■■□□□ 1.16
SLC39A1-204ENST00000368623 ATP1B4Q9UN42 357 aaPredicted RBP22.29■■□□□ 1.16
SLC39A1-204ENST00000368623 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
SLC39A1-204ENST00000368623 TIAM1Q13009 1591 aa22.17■■□□□ 1.14
SLC39A1-204ENST00000368623 POLA1P09884 1462 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms