RNA–Protein interactions for RNA: ENST00000368060.7

MED23-204, Transcript of mediator complex subunit 23, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MED23, Length 4,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED23-204ENST00000368060 NISCHQ9Y2I1 1504 aa19.12■□□□□ 0.65
MED23-204ENST00000368060 DCAF8L2P0C7V8 631 aa18.52■□□□□ 0.56
MED23-204ENST00000368060 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
MED23-204ENST00000368060 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
MED23-204ENST00000368060 ABCC9O60706 1549 aa16.47■□□□□ 0.23
MED23-204ENST00000368060 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
MED23-204ENST00000368060 FAM9AQ8IZU1 332 aaPredicted RBP16.25■□□□□ 0.19
MED23-204ENST00000368060 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
MED23-204ENST00000368060 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
MED23-204ENST00000368060 APLP2Q06481 763 aa16.06■□□□□ 0.16
MED23-204ENST00000368060 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
MED23-204ENST00000368060 RANGAP1P46060 587 aaPredicted RBP15.89■□□□□ 0.13
MED23-204ENST00000368060 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
MED23-204ENST00000368060 UBTFP17480 764 aaKnown RBP15.84■□□□□ 0.13
MED23-204ENST00000368060 TTBK1Q5TCY1 1321 aaPredicted RBP15.78■□□□□ 0.12
MED23-204ENST00000368060 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
MED23-204ENST00000368060 CHIC1Q5VXU3 224 aa15.67■□□□□ 0.1
MED23-204ENST00000368060 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
MED23-204ENST00000368060 PCGF6Q9BYE7 350 aa15.59■□□□□ 0.09
MED23-204ENST00000368060 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
MED23-204ENST00000368060 NACADO15069 1562 aa15.46■□□□□ 0.06
MED23-204ENST00000368060 LOC105371045A0A1W2PR82 267 aa15.44■□□□□ 0.06
MED23-204ENST00000368060 PPARGC1BQ86YN6 1023 aaKnown RBP15.37■□□□□ 0.05
MED23-204ENST00000368060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.33■□□□□ 0.04
MED23-204ENST00000368060 HNRNPUL2Q1KMD3 747 aaKnown RBP15.33■□□□□ 0.04
MED23-204ENST00000368060 CCER1Q8TC90 406 aaPredicted RBP15.31■□□□□ 0.04
MED23-204ENST00000368060 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
MED23-204ENST00000368060 ZEB1P37275 1124 aaPredicted RBP15.18■□□□□ 0.02
MED23-204ENST00000368060 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
MED23-204ENST00000368060 FBLN2P98095 1184 aa15.16■□□□□ 0.02
MED23-204ENST00000368060 ITGAEP38570 1179 aa15.14■□□□□ 0.01
MED23-204ENST00000368060 RSF1Q96T23 1441 aaPredicted RBP15.12■□□□□ 0.01
MED23-204ENST00000368060 CSRNP3Q8WYN3 585 aa15.11■□□□□ 0.01
MED23-204ENST00000368060 MYT1LQ9UL68 1186 aa15.1■□□□□ 0.01
MED23-204ENST00000368060 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
MED23-204ENST00000368060 BAZ1AQ9NRL2 1556 aaPredicted RBP15□□□□□ -0.01
MED23-204ENST00000368060 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
MED23-204ENST00000368060 MYO15BQ96JP2 1530 aa14.98□□□□□ -0.01
MED23-204ENST00000368060 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
MED23-204ENST00000368060 FAM50AQ14320 339 aaKnown RBP14.91□□□□□ -0.02
MED23-204ENST00000368060 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
MED23-204ENST00000368060 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
MED23-204ENST00000368060 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
MED23-204ENST00000368060 PELP1Q8IZL8 1130 aaKnown RBP14.74□□□□□ -0.05
MED23-204ENST00000368060 CDK11AQ9UQ88 783 aaPredicted RBP14.74□□□□□ -0.05
MED23-204ENST00000368060 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
MED23-204ENST00000368060 TRIM52Q96A61 297 aa14.72□□□□□ -0.05
MED23-204ENST00000368060 HRCP23327 699 aa14.71□□□□□ -0.05
MED23-204ENST00000368060 SMARCA2P51531 1590 aa14.71□□□□□ -0.05
MED23-204ENST00000368060 ERCC6Q03468 1493 aa14.68□□□□□ -0.06
MED23-204ENST00000368060 EEA1Q15075 1411 aa14.68□□□□□ -0.06
MED23-204ENST00000368060 CENPBP07199 599 aaPredicted RBP14.67□□□□□ -0.06
MED23-204ENST00000368060 POLR3GLQ9BT43 218 aa14.65□□□□□ -0.06
MED23-204ENST00000368060 KIF27Q86VH2 1401 aa14.63□□□□□ -0.07
MED23-204ENST00000368060 ZNF777Q9ULD5 760 aaPredicted RBP14.62□□□□□ -0.07
MED23-204ENST00000368060 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
MED23-204ENST00000368060 CCDC88BA6NC98 1476 aa14.62□□□□□ -0.07
MED23-204ENST00000368060 CLIP1P30622 1438 aa14.57□□□□□ -0.08
MED23-204ENST00000368060 WIZO95785 1651 aa14.56□□□□□ -0.08
MED23-204ENST00000368060 ATAD2BQ9ULI0 1458 aa14.56□□□□□ -0.08
MED23-204ENST00000368060 NEUROD1Q13562 356 aa14.55□□□□□ -0.08
MED23-204ENST00000368060 GOLGA3Q08378 1498 aa14.55□□□□□ -0.08
MED23-204ENST00000368060 TOP2AP11388 1531 aaKnown RBP14.53□□□□□ -0.08
MED23-204ENST00000368060 YTHDC1Q96MU7 727 aaKnown RBP14.53□□□□□ -0.08
MED23-204ENST00000368060 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
MED23-204ENST00000368060 SMARCA4P51532 1647 aa14.52□□□□□ -0.09
MED23-204ENST00000368060 MTUS2Q5JR59 1369 aa14.49□□□□□ -0.09
MED23-204ENST00000368060 CEP164Q9UPV0 1460 aa14.48□□□□□ -0.09
MED23-204ENST00000368060 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
MED23-204ENST00000368060 CUX2O14529 1486 aa14.47□□□□□ -0.09
MED23-204ENST00000368060 CNGB1Q14028 1251 aaPredicted RBP14.46□□□□□ -0.09
MED23-204ENST00000368060 CEP162Q5TB80 1403 aa14.46□□□□□ -0.1
MED23-204ENST00000368060 ZNF326Q5BKZ1 582 aaKnown RBP14.44□□□□□ -0.1
MED23-204ENST00000368060 TNIKQ9UKE5 1360 aa14.42□□□□□ -0.1
MED23-204ENST00000368060 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
MED23-204ENST00000368060 SOGA1O94964 1423 aa14.41□□□□□ -0.1
MED23-204ENST00000368060 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
MED23-204ENST00000368060 CARMIL1Q5VZK9 1371 aa14.41□□□□□ -0.1
MED23-204ENST00000368060 NEFLP07196 543 aa14.41□□□□□ -0.1
MED23-204ENST00000368060 PLEKHD1A6NEE1 506 aa14.37□□□□□ -0.11
MED23-204ENST00000368060 TSPY4P0CV99 314 aa14.36□□□□□ -0.11
MED23-204ENST00000368060 TSPY10P0CW01 314 aa14.36□□□□□ -0.11
MED23-204ENST00000368060 CHIC2Q9UKJ5 165 aa14.36□□□□□ -0.11
MED23-204ENST00000368060 TDRD9Q8NDG6 1382 aaKnown RBP14.35□□□□□ -0.11
MED23-204ENST00000368060 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
MED23-204ENST00000368060 KCNH8Q96L42 1107 aa14.34□□□□□ -0.11
MED23-204ENST00000368060 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
MED23-204ENST00000368060 DIEXFQ68CQ4 756 aaKnown RBP14.31□□□□□ -0.12
MED23-204ENST00000368060 NCAPD3P42695 1498 aa14.29□□□□□ -0.12
MED23-204ENST00000368060 FANCD2Q9BXW9 1451 aa14.26□□□□□ -0.13
MED23-204ENST00000368060 BCANQ96GW7 911 aa14.26□□□□□ -0.13
MED23-204ENST00000368060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.139e-7■■■□□ 15.5
MED23-204ENST00000368060 FHAD1B1AJZ9 1412 aa14.24□□□□□ -0.13
MED23-204ENST00000368060 CHGAP10645 457 aaKnown RBP14.23□□□□□ -0.13
MED23-204ENST00000368060 TONSLQ96HA7 1378 aa14.23□□□□□ -0.13
MED23-204ENST00000368060 CFDP1Q9UEE9 299 aaPredicted RBP14.23□□□□□ -0.13
MED23-204ENST00000368060 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
MED23-204ENST00000368060 RRP7BPQ9NSQ0 103 aa14.19□□□□□ -0.14
MED23-204ENST00000368060 ZNF316A6NFI3 1004 aaPredicted RBP14.18□□□□□ -0.14
MED23-204ENST00000368060 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms